| Literature DB >> 32429906 |
Laura J Shallcross1,2, Patrick Rockenschaub3, David McNulty4, Nick Freemantle5, Andrew Hayward6, Martin J Gill7.
Abstract
BACKGROUND: Suspected urinary tract infection (UTI) syndromes are a common reason for empirical antibiotics to be prescribed in the Emergency Department (ED), but differentiating UTI from other conditions with a similar presentation is challenging. We investigated how often an ED diagnosis of UTI is confirmed clinically/microbiologically, and described conditions which present as UTI syndromes.Entities:
Keywords: Antimicrobial resistance; Antimicrobial stewardship; Electronic health records; Emergency department; Urinary tract infection
Mesh:
Substances:
Year: 2020 PMID: 32429906 PMCID: PMC7238572 DOI: 10.1186/s12873-020-00333-y
Source DB: PubMed Journal: BMC Emerg Med ISSN: 1471-227X
Definition of clinical diagnosis of urinary tract infection syndromes
1. Probable or possible symptomsa of UTI and either: a. Urinary WCC > thresholdb and urinary culture > 103cfu/mL; or b. Urinary culture > 105 cfu/mL (irrespective of urinary WCC result) 2. Urinary pathogen identified from both blood and urine samples | |
1. No urinary symptomsa and either: a. Urinary WCC > thresholdb and urinary culture > 103cfu/mL; or b. Urinary culture > 105 cfu/mL 2. Probable or possible urinary symptomsa and urinary culture >103cfu/mL and urinary WCC not performed. | |
1. Urine culture < 103 2. Urine culture < 105 and urinary WCC < thresholdb 3. No urinary symptomsa, urine culture < 105 and urinary WCC not performed |
a Urinary symptoms include: dysuria, urinary frequency, urgency, hesitancy, urinary retention, difficulty passing urine, haematuria, and malodorous urine. We further considered the following relevant pain symptoms reported by the patients: abdominal, back, flank, loin, and suprapubic. Symptoms were classified as probable if patients reported at least two urinary symptoms or a urinary symptom and pain. Symptoms were classified as possible if patients reported only one urinary symptom or only pain
b In October 2015 the microbiology laboratory revised their standard operating procedure for urine culture which included adjusting the urinary white cell count threshold for undertaking urine culture from 40 cells/μL to 80 cells/μL
Fig. 1Study flow chart
Baseline characteristics of the study population, stratified by admission status
| Not admitted to hospital | Admitted to hospital | |
|---|---|---|
| 272 (100.0) | 671 (100.0) | |
| 44.0 (26.0–71.0) | 72.00 (50.0–84.0) | |
| 191 (70.2) | 404 (60.2) | |
| Least deprived (Q1-Q3) | 16 (21.6) | 221 (33.1) |
| Most deprived (Q4-Q5) | 58 (78.4) | 446 (66.9) |
| Missing | 198 | 4 |
| White | 164 (65.9) | 532 (82.0) |
| Asian | 47 (18.9) | 74 (11.4) |
| Other | 38 (15.3) | 43 (6.6) |
| Missing | 23 | 22 |
| 0 | 206 (75.7) | 370 (55.1) |
| 1–2 | 34 (12.5) | 170 (25.3) |
| > 2 | 32 (11.8) | 131 (19.5) |
| 21 (7.7) | 53 (7.9) | |
| 33 (12.1) | 7 (1.0) | |
| 0.00 (0.0–1.0) | 1.00 (0.0–2.0) | |
| Missing | 95 | 10 |
| 36.50 (36.1–36.9) | 36.50 (36.0–37.2) | |
| Missing | 12 | 3 |
| 196 (72.1) | 446 (66.5) | |
| Frequency | 30 (11.0) | 68 (10.1) |
| Dysuria | 63 (23.2) | 88 (13.1) |
| Hesitancy | 2 (0.7) | 1 (0.1) |
| Malodorous urine | 1 (0.4) | 16 (2.4) |
| Urinary retention | 2 (0.7) | 5 (0.7) |
| Difficulty passing urine | 9 (3.3) | 20 (3.0) |
| Pain in back or abdomen | 79 (29.0) | 144 (21.5) |
a Numerical variables were summarized using median (Interquartile range – IQR); b Defined as the presence of leukocytes and/or nitrates on urinalysis
Antibiotic use and microbiological outcomes in patients with an ED diagnosis of UTI syndromes
| UTI | Pyelonephritis | Urosepsis | ||
|---|---|---|---|---|
| Admitted | Not admitted | |||
| 83 (100.0) | 108 (100.0) | 56 (100.0) | 42 (100.0) | |
| Piperacillin / tazobactam | 25 (33.3) | 1 (1.0) | 42 (72.4) | 30 (62.5) |
| Nitrofurantoin | 15 (20.0) | 35 (33.7) | 0 (0.0) | 1 (2.1) |
| Ciprofloxacin | 10 (13.3) | 18 (17.3) | 11 (19.0) | 4 (8.3) |
| Trimethoprim | 6 (8.0) | 19 (18.3) | 0 (0.0) | 0 (0.0) |
| Amoxicillin / clavulanic acid | 7 (9.3) | 9 (8.7) | 3 (5.2) | 3 (6.2) |
| Other | 12 (16.0) | 22 (21.2) | 2 (3.4) | 10 (20.8) |
| Positive (> 105 cfu/mL) | 22 (26.5) | 43 (39.8) | 20 (35.7) | 10 (23.8) |
| 18 (21.7) | 34 (31.5) | 14 (25.0) | 9 (21.4) | |
| 0 (0.0) | 1 (0.9) | 2 (3.6) | 0 (0.0) | |
| 1 (1.2) | 2 (1.9) | 1 (1.8) | 0 (0.0) | |
| Other | 3 (3.6) | 6 (5.6) | 3 (5.4) | 1 (2.4) |
| Heavy mixed growth / no growth | 33 (39.8) | 35 (32.4) | 24 (42.9) | 19 (45.2) |
| Culture not performed | 28 (33.7) | 30 (27.8) | 12 (21.4) | 13 (31.0) |
| Resistant urine pathogensc | 8 (36.4) | 11 (25.6) | 3 (15.0) | 5 (50.0) |
| < thresholdb | 24 (32.9) | 27 (27.3) | 12 (23.1) | 14 (35.9) |
| > thresholdb | 49 (67.1) | 72 (72.7) | 40 (76.9) | 25 (64.1) |
| Not performed | 10 | 9 | 4 | 3 |
| Positive | 4 (4.8) | 1 (0.9) | 2 (3.6) | 7 (16.7) |
| 0 (0.0) | 0 (0.0) | 1 (1.8) | 3 (7.1) | |
| Other | 4 (4.8) | 1 (0.9) | 1 (1.8) | 4 (9.5) |
| No growth | 19 (22.9) | 4 (3.7) | 28 (50.0) | 28 (66.7) |
| Culture not taken | 60 (72.3) | 103 (95.4) | 26 (46.4) | 7 (16.7) |
| Resistant blood pathogens | 0 (0.0) | 0 (0.0) | 0 (0.0) | 2 (28.6) |
| At admission | 17 (24.3) | – | 4 (8.2) | 4 (9.5) |
| < 72 h | 24 (34.3) | – | 5 (10.2) | 8 (19.0) |
a Multiple antibiotics may be given to a single patient and multiple specimen might be identified from a single patient’s specimen
b Threshold for undertaking urine culture was adjusted from 40 urinary white cells/μL to 80 urinary white cells/μL in October 2015, following the introduction of a new laboratory standardised operating procedure.
c Heavy mixed growth: samples in which there were multiple organisms of >1 species, where no single species predominates and colonies are so numerous as to be unquantifiable by the culture method used. These samples are most likely to represent contamination
Fig. 2Comparison of the diagnosis that was made in the Emergency Department and the reason for the patient’s admission to hospital (based on ICD-10 code), in a) patients with clinical/microbiological evidence of UTI and b) patients without clinical/microbiological evidence of UTI. This figure illustrates how diagnoses that are made in the ED are revised during admission in light of test results and clinical progression. For example, in Fig. 2a 30 patients with clinical/ microbiological evidence of UTI are diagnosed with pyelonephritis in the ED. The diagnosis of pyelonephritis is “correct” in 11 (36.7%) cases, but it is revised to lower UTI or a non-infectious condition in 11 (36.7%) and 5 (16.7%) cases respectively. In Fig. 2b, 61 cases are diagnosed with lower UTI in the ED (but none of these individuals have clinical/microbiological evidence of UTI). The diagnosis of lower UTI is confirmed 23 (37.7%) cases, but 12 patients (19.7%) are diagnosed with a different infection and 24 (39.3%) are diagnosed with a non-infectious condition