| Literature DB >> 32429377 |
Danuta Branowska1, Zbigniew Karczmarzyk1, Ewa Wolińska1, Waldemar Wysocki1, Maja Morawiak2, Zofia Urbańczyk-Lipkowska2, Anna Bielawska3, Krzysztof Bielawski3.
Abstract
In this study, we synthesized novel sulfonamides with aEntities:
Keywords: X-ray analysis; anticancer activity; conformational analysis; molecular docking; sulfonamides
Mesh:
Substances:
Year: 2020 PMID: 32429377 PMCID: PMC7288137 DOI: 10.3390/molecules25102324
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Structures of novel 1,2,4-triazine sulfonamides and sulfonamide derivatives with anticancer activity.
Scheme 1Synthesis of sulfonamides 5 and 6 starting from sulfenyl chloride 2a,b.
Scheme 2Synthesis of sulfonamide 7.
Scheme 3Synthesis of 1,2,4-triazine p-toluenesulfonamide 9 and 11.
Scheme 4Reaction of 3-amino-1,2,4-triazine with 2-nitrobenzenesulfonyl chloride.
Figure 2Viability of (A) MCF-7 and (B) MDA-MB-231 cells treated for 24 h with different concentrations of tested compounds (3a, 4a, 5a, 6a, 3b, 4b, 5b, 6b, 7, 9, 11, 15) and chlorambucil. Mean ± SD values from three independent experiments (n = 3) done in duplicate are presented (errors were in the range of ±2).
Figure 3Antiproliferative effects of tested compounds (3a, 4a, 5a, 6a, 3b, 4b, 5b, 6b, 7, 9, 11, 15) and chlorambucil in cultured (A) MCF-7 and (B) MDA-MB-231 cells as measured by inhibition of [3H]-thymidine incorporation into DNA. Mean ± SD values from three independent experiments (n = 3) done in duplicate are presented (errors were in the range of ±2).
Figure 4A view of the X-ray molecular structures of 3b and 4b with atomic labelling and displacement ellipsoids (30% probability) for non-H atoms.
Figure 5Overlay of X-ray molecules 3b (red) and 4b (yellow) by least-squares fitting of the atoms of 1,2,4-triazine ring (RMS = 0.0092 Å).
Figure 6The energy effect of the free rotation on the N–S bond (C–N–S–C torsion angle) calculated for 4b, 5b, and 6b using the semiempirical AM1 method.
The dipole moments, D (D), NBO atomic charges, (e), energies of HOMO and LUMO orbitals, EHOMO and ELUMO (eV) calculated at DFT/B3LYP/6-311++G(d,p) level in the gaseous phase and calculated logP coefficient for 3ab–6ab, 7, 9, 11, and 15.
| Compound |
| NBO Charge |
|
| Δ | log | |
|---|---|---|---|---|---|---|---|
| S | N | ||||||
|
| 4.697 | +0.523 | −0.767 | −7.04 | −2.90 | 4.14 | −0.97 |
|
| 4.198 | +0.613 | −0.789 | −7.27 | −3.55 | 3.72 | −4.88 |
|
| 4.564 | +0.532 | −0.636 | −6.84 | −2.87 | 3.97 | −1.20 |
|
| 4.145 | +0.630 | −0.658 | −7.07 | −3.51 | 3.56 | −5.11 |
|
| 2.431 | +2.217 | −0.701 | −7.17 | −3.46 | 3.71 | −2.15 |
|
| 3.778 | +2.230 | −0.705 | −7.32 | −3.87 | 3.45 | −6.06 |
|
| 3.618 | +1.408 | −0.657 | −7.02 | −3.30 | 3.72 | −1.87 |
|
| 1.275 | +1.444 | −0.655 | −7.14 | −3.81 | 3.33 | −5.78 |
|
| 4.069 | +2.208 | −0.854 | −7.37 | −2.89 | 4.48 | 3.67 |
|
| 7.042 | +2.222 | −0.830 | −6.86 | −2.60 | 4.26 | 4.08 |
|
| 6.417 | +2.211 | −0.835 | −6.79 | −2.47 | 4.32 | 4.08 |
|
| 7.090 | +2.218 | −0.841 | −7.22 | −2.73 | 4.49 | −1.91 |
The results of the molecular docking of ligands 3ab–6ab, 7, 9, 11, and 15 to estrogen receptor alpha (ERα).
| Compound | ChemPLP | Ligand–Amino Acids Interactions |
|---|---|---|
|
| 63.03 | N4...H–S(Cys530), S8...H–C(Ala350), (N=)O...H–C(Leu536) |
|
| 62.07 | (N=)O...H–C(His524), (N=)O...H–O(Thr347), S8...H–S(Cys530) |
|
| 75.53 | N4...H–O(Thr347), (N=)O...H–O-H...H–O(Tyr526) |
|
| 61.50 | S8...H–C(Leu384), S8...H–C(Met388) |
|
| 58.52 | - |
|
| 58.28 | - |
|
| 60.40 | N1...H–S(Cys530), N1...H–O(Thr347), (N=)O...H–N(Arg394) |
|
| 59.62 | N1...H–O(Thr347) |
|
| 65.21 | - |
|
| 75.26 | (S8=)O...H–C(Leu384) |
|
| 72.61 | (S8=)O...H–C(Ala350), (Ph)C–H…O(Glu419) |
|
| 59.92 | - |
|
| 137.93 | O…H–O(Glu353), O…H–N(Arg394), C…H–S(Cys530), N…H–C(Trp383), O…H–C(Met388) |
|
| 76.79 | C…H–S(Cys530) |
Figure 7A view of the interaction between (a) IOG, (b) chlorambucil, (c) 4a, and (d) 4b and the binding site of ERα.