| Literature DB >> 32429201 |
Juan Del Coso1, Zhuangzhuang Gu2, Wuyun Gerile3, Rui Yang4, Roberto Díaz-Peña5, Pedro L Valenzuela6, Alejandro Lucia7,8, Zihong He4.
Abstract
Cardiorespiratory fitness, as assessed through peak oxygen uptake (VO2peak), is a powerful health indicator. We aimed to evaluate the influence of several candidate causal genetic variants on VO2peak level in untrained Han Chinese people. A total of 1009 participants (566 women; age [mean ± SD] 40 ± 14 years, VO2peak 29.9 ± 7.1 mL/kg/min) performed a maximal incremental cycling test for VO2peak determination. Genomic DNA was extracted from peripheral whole blood, and genotyping analysis was performed on 125 gene variants. Using age, sex, and body mass as covariates, and setting a stringent threshold p-value of 0.0004, only one single nucleotide polymorphism (SNP), located in the gene encoding angiotensin-converting enzyme (rs4295), was associated with VO2peak (β = 0.87; p < 2.9 × 10-4). Stepwise multiple regression analysis identified a panel of three SNPs (rs4295 = 1.1%, angiotensin II receptor type 1 rs275652 = 0.6%, and myostatin rs7570532 = 0.5%) that together accounted for 2.2% (p = 0.0007) of the interindividual variance in VO2peak. Participants carrying six 'favorable' alleles had a higher VO2peak (32.3 ± 8.1 mL/kg/min) than those carrying only one favorable allele (24.6 ± 5.2 mL/kg/min, p < 0.0001). In summary, VO2peak at the pre-trained state is partly influenced by several polymorphic variations in candidate genes, but they represent a minor portion of the variance.Entities:
Keywords: VO2max; endurance performance; genomics; maximal oxygen uptake; single nucleotide polymorphism
Mesh:
Substances:
Year: 2020 PMID: 32429201 PMCID: PMC7288307 DOI: 10.3390/genes11050555
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
List of SNPs investigated for association with VO2peak (mL/kg/min) in Han Chinese untrained individuals.
| Gene | SNP | MA | MAF |
|---|---|---|---|
|
| rs4295 | G | 38.1 |
|
| rs4341 | G | 34.9 |
|
| rs4363 | G | 38.7 |
|
| rs6632677 | C | 9.2 |
|
| rs10022018 | G | 24.4 |
|
| rs11732302 | C | 24.7 |
|
| rs12503643 | G | 45.9 |
|
| rs12644905 | T | 19.6 |
|
| rs13126272 | T | 11.0 |
|
| rs1803898 | A | 7.3 |
|
| rs2292898 | C | 7.8 |
|
| rs13120078 | A | 8.2 |
|
| rs2280297 | C | 47.6 |
|
| rs2292899 | A | 38.1 |
|
| rs3749233 | A | 25.9 |
|
| rs3792312 | G | 41.7 |
|
| rs4069938 | G | 37.7 |
|
| rs6552828 | G | 35.2 |
|
| rs902177 | C | 28.2 |
|
| rs1815739 | T | 41.7 |
|
| rs10864770 | T | 34.5 |
|
| rs11568046 | C | 12.9 |
|
| rs2478523 | C | 46.0 |
|
| rs2478544 | C | 21.8 |
|
| rs2493132 | T | 37.3 |
|
| rs3789671 | G | 45.5 |
|
| rs3789678 | T | 18.7 |
|
| rs3889728 | A | 49.4 |
|
| rs5050 | G | 14.8 |
|
| rs6687360 | C | 33.1 |
|
| rs699 | T | 19.7 |
|
| rs7079 | A | 16.2 |
|
| rs7536290 | G | 22.0 |
|
| rs2131127 | T | 37.4 |
|
| rs275652 | C | 13.6 |
|
| rs3772616 | A | 17.8 |
|
| rs385338 | G | 18.0 |
|
| rs5182 | C | 28.1 |
|
| rs6801836 | C | 14.2 |
|
| rs10130005 | C | 18.3 |
|
| rs10132462 | T | 28.1 |
|
| rs11160322 | C | 23.0 |
|
| rs11627176 | G | 12.0 |
|
| rs11627761 | T | 15.3 |
|
| rs11848502 | T | 30.1 |
|
| rs12433275 | T | 16.3 |
|
| rs12888402 | C | 16.7 |
|
| rs1799722 | C | 48.0 |
|
| rs1959053 | T | 25.3 |
|
| rs2069575 | A | 20.4 |
|
| rs2069578 | G | 39.1 |
|
| rs2069586 | A | 16.5 |
|
| rs2069588 | T | 18.0 |
|
| rs2369521 | G | 35.6 |
|
| rs4144131 | A | 43.9 |
|
| rs4900315 | C | 46.5 |
|
| rs4900318 | A | 49.7 |
|
| rs4905470 | A | 20.0 |
|
| rs4905474 | A | 37.1 |
|
| rs6575577 | G | 22.5 |
|
| rs7155797 | T | 44.4 |
|
| rs7161665 | C | 47.9 |
|
| rs8013400 | T | 28.5 |
|
| rs8016905 | A | 32.7 |
|
| rs885818 | T | 13.4 |
|
| rs945039 | T | 42.9 |
|
| rs2071616 | T | 8.8 |
|
| rs16835198 | T | 47.7 |
|
| rs3480 | G | 24.8 |
|
| rs3797296 | G | 17.3 |
|
| rs3797297 | T | 12.8 |
|
| rs1421085 | C | 10.4 |
|
| rs1558902 | A | 10.6 |
|
| rs9939609 | A | 10.4 |
|
| rs16832288 | A | 19.9 |
|
| rs7570532 | G | 26.0 |
|
| rs1057972 | A | 49.9 |
|
| rs1524107 | C | 29.3 |
|
| rs2069840 | G | 7.3 |
|
| rs2069830 | G | 27.2 |
|
| rs2069837 | G | 20.1 |
|
| rs2069852 | G | 37.0 |
|
| rs2274906 | A | 36.5 |
|
| rs2274910 | T | 29.6 |
|
| rs2297560 | T | 13.9 |
|
| rs6427552 | C | 24.7 |
|
| rs12374310 | C | 43.9 |
|
| rs12650562 | C | 49.5 |
|
| rs251468 | T | 19.8 |
|
| rs4452416 | G | 13.4 |
|
| rs4697425 | G | 30.8 |
|
| rs6821591 | C | 29.9 |
|
| rs12409277 | C | 42.0 |
|
| rs2236518 | A | 44.5 |
|
| rs10853114 | C | 37.8 |
| PYY | rs12953033 | A | 6.9 |
|
| rs162430 | G | 35.3 |
|
| rs1859223 | G | 27.2 |
|
| rs11571078 | T | 12.7 |
|
| rs1464816 | T | 24.4 |
|
| rs2368564 | T | 20.3 |
|
| rs4951313 | G | 29.1 |
|
| rs5707 | G | 40.3 |
|
| rs3745367 | A | 35.5 |
Abbreviations: MA, minor allele; MAF, minor allele frequency; SNP, single nucleotide polymorphism; VO2peak, peak oxygen uptake. Abbreviations for gene names: ACE, angiotensin-converting enzyme; ACE2, angiotensin-converting enzyme 2; ACSL1, acyl-CoA synthase long-chain member 1; ACTN3, alpha-actinin-3; AGT, angiotensinogen; AGTR1, angiotensin II receptor type 1; AGTR2, angiotensin II receptor type 2; BDKRB2, bradykinin receptor B2; FGF21, Fibroblast growth factor 21; FGFR2, fibroblast growth factor receptor 2; FNDC5, fibronectin type III domain-containing protein 5; FST, follistatin; FTO, fat mass and obesity-associated protein (also known as ‘alpha-ketoglutarate-dependent dioxygenase’; GDF8, growth differentiation factor 8 (also known as ‘myostatin’); IL-6, interleukin 6; IL-15, interleukin 15; ITLN1, intelectin 1; PGC-1α, peroxisome proliferator-activated receptor-gamma coactivator (PGC)-1alpha; PRDM16, PR domain containing 16; PYY, peptide YY; REN, renin; RETN, resistin.
List of SNPs discarded for analyses because did not meet the Hardy–Weinberg equilibrium.
| Gene | SNP | MA | MAF |
|---|---|---|---|
|
| rs2074192 | T | 42.6 |
|
| rs6632677 | C | 9.2 |
|
| rs12721241 | A | 12.0 |
|
| rs2675511 | G | 13.9 |
|
| rs5193 | T | 15.9 |
|
| rs12840631 | G | 18.1 |
|
| rs6608590 | T | 41.6 |
|
| rs4900313 | A | 16.2 |
|
| rs17110586 | G | 14.8 |
|
| rs17114388 | G | 19.7 |
Abbreviations: see Table A1.
List of SNPs discarded for analyses because the frequency of the minor allele was inferior to 5%.
| Gene | SNP | MA | MAF |
|---|---|---|---|
|
| rs838133 | A | 1.1 |
|
| rs838145 | G | 1.3 |
|
| rs726344 | A | 0.2 |
|
| rs12152850 | T | 1.6 |
|
| rs1805086 | C | 0.2 |
|
| rs3791784 | G | 2.3 |
|
| rs1800795 | C | 0.7 |
|
| rs1589241 | T | 0.8 |
|
| rs1554606 | T | 1.8 |
|
| rs11265509 | T | 4.7 |
Abbreviations: see Table A1.
List of SNPs discarded for analyses because all individuals of the sample had the same genotype.
| Gene | SNP | Genotype |
|---|---|---|
|
| rs12721276 | CC |
|
| rs432747 | GG |
Abbreviations: see Table A1.
Target genes selected for the investigation.
| Gene | Numbers of SNPs | Chromosome Location | References |
|---|---|---|---|
|
| 3 | chr17:58,908,166-58,928,711 | [ |
|
| 2 | chrX:15,489,077-15,529,058 | [ |
|
| 15 | chr4: 185,911,544-185,986,209 | [ |
|
| 1 | chr11:66,313,866-66,330,800 | [ |
|
| 13 | chr1:228,902,892-228,918,564 | [ |
|
| 9 | chr3:149,898,348- 149,943,480 | [ |
|
| 3 | chrX:115,214,031-115,221,847 | [ |
|
| 28 | chr14:95,738,950-95,782,536 | [ |
|
| 2 | chr19:53,949,156-53,955,394 | [ |
|
| 1 | chr10:123,237,848-123,357,972 | [ |
|
| 3 | chr1:33,327,869-33,338,083 | [ |
|
| 3 | chr5: 52,812,352-52,817,659 | [ |
|
| 3 | chr16:53,737,875-54,155,853 | [ |
|
| 4 | chr2:190,920,423-190,927,455 | [ |
|
| 7 | chr7:22,733,345-22,738,141 | [ |
|
| 2 | chr4:142,557,752-142,665,140 | [ |
|
| 5 | chr1:160,846,329-160,854,960 | [ |
|
| 6 | chr4: 23,756,664-23,905,712 | [ |
|
| 1 | chr5:149,109,861-149,234,585 | [ |
|
| 1 | chr10: 103, 880, 777-103, 902, 078 | [ |
|
| 2 | chr1: 2,985,732-3,355,185 | [ |
|
| 5 | chr17:39,385,633-39,437,363 | [ |
|
| 5 | chr1: 202,390,571-202,402,088 | [ |
|
| 1 | chr19:7,639,972-7,641,340 | [ |
Abbreviations: SNP, single nucleotide polymorphism. Abbreviations for gene names: ACE, angiotensin-converting enzyme; ACE2, angiotensin-converting enzyme 2; ACSL1, acyl-CoA synthase long-chain member 1; ACTN3, alpha-actinin-3; AGT, angiotensinogen; AGTR1, angiotensin II receptor type 1; AGTR2, angiotensin II receptor type 2; BDKRB2, bradykinin receptor B2; FGF21, Fibroblast growth factor 21; FGFR2, fibroblast growth factor receptor 2; FNDC5, fibronectin type III domain-containing protein 5; FST, follistatin; FTO, fat mass and obesity-associated protein (also known as ‘alpha-ketoglutarate-dependent dioxygenase’; GDF8, growth differentiation factor 8 (also known as ‘myostatin’); IL-6, interleukin 6; IL-15, interleukin 15; ITLN1, intelectin 1; PGC-1α, peroxisome proliferator-activated receptor-gamma coactivator (PGC)-1alpha; PGC-1β, peroxisome proliferator-activated receptor-gamma coactivator (PGC)-1beta; peroxisome PPRC1, proliferator-activated receptor gamma, coactivator-related 1; PRDM16, PR domain containing 16; PYY, peptide YY; REN, renin; RETN, resistin.
Main characteristics of the study participants (N = 1009) and their association with peak oxygen uptake.
| Variable | Mean ± SD | Range | β | |
|---|---|---|---|---|
| Age (year) | 40 ± 14 | 19–69 | −0.27 | <0.001 |
| Height (cm) | 165.3 ± 8.3 | 146.2–187.0 | 0.31 | <0.001 |
| Body mass (kg) | 64.3 ± 11.6 | 39–104 | −0.01 | 0.523 |
| Body mass index (kg/m2) | 23.4 ± 3.1 | 15.6–34.8 | −0.64 | <0.001 |
| Body fat (%) | 27.1 ± 8.8 | 4.5–44.5 | −0.58 | <0.001 |
| Fat-free mass (kg) | 43.8 ± 9.5 | 24.8–70.1 | 0.31 | <0.001 |
Figure 1Distribution of peak oxygen uptake (VO2peak) data in the study participants.
Figure 2Variance in peak oxygen uptake in the study participants explained by genetic variants alone (a) and by genetic variants plus anthropometric covariates (b). Abbreviations for gene names: ACE, angiotensin-converting enzyme; AGTR1, angiotensin II receptor type 1; BDKRB2, bradykinin receptor B2; GDF8, growth differentiation factor 8 (also known as ‘myostatin’).
List of single nucleotide polymorphisms associated with peak oxygen uptake in the study participants. Model 1, with genetic-only influence; model 2 with covariates.
| SNP | Partial R2 | ||
|---|---|---|---|
|
| 0.0110 | 0.0024 | |
| 0.0056 | 0.0293 | ||
| 0.0053 | 0.0342 | ||
|
| Age | 0.2052 | <0.0001 |
| Sex | 0.1800 | <0.0001 | |
| Weight | 0.0994 | <0.0001 | |
| 0.0063 | 0.0015 | ||
| 0.0046 | 0.0058 | ||
|
| 0.0037 | 0.0135 |
Abbreviation: SNP, single nucleotide polymorphism; Abbreviations for gene names: ACE, angiotensin-converting enzyme; AGTR1, angiotensin II receptor type 1; BDKRB2, bradykinin receptor B2; GDF8, growth differentiation factor 8 (also known as ‘myostatin’).
Figure 3Box-and-whisker plots showing peak oxygen uptake (VO2peak) in the study participants according to genetic variations in the genes for angiotensin-converting enzyme (ACE; rs4295), angiotensin II receptor type 1 (AGTR1; rs275652), and growth differentiation factor 8 (GDF8, also known as ‘myostatin’; rs7570532). The lines in the box represent the first, second (median) and third quartiles, and the whiskers represent 1.5 × interquartile ranges. Each dot represents one individual within the specified genotype. (*) Depicts a statistically significant difference from CC genotype in ACE rs4295 polymorphism at p < 0.05. (†) Depicts a statistically significant difference from CC genotype in AGTR1 rs275652 polymorphism at p < 0.05.
Figure 4Peak oxygen uptake (VO2peak) levels in the study participants according to the genotype score (computed by using a weighted score of angiotensin-converting enzyme rs4295, angiotensin II receptor type 1 rs275652 and growth differentiation factor 8 rs7570532 genotypes). Abbreviations/symbols: a.u., arbitrary units; a, difference from 0–0.9 a.u. at p<0.05; b, difference from 1.0–1.9 a.u. at p < 0.05; c, difference from 2.0–2.9 a.u. at p < 0.05; d, difference from 3.0–3.9 a.u. at p < 0.05.