| Literature DB >> 32429154 |
Andrey V Markov1, Aleksandra V Sen'kova1, Irina I Popadyuk2, Oksana V Salomatina1,2, Evgeniya B Logashenko1, Nina I Komarova2, Anna A Ilyina1, Nariman F Salakhutdinov2, Marina A Zenkova1.
Abstract
A series of novel 18βH-glycyrrhetinic acid (Entities:
Keywords: 18βH-glycyrrhetinic acid; anti-inflammatory activity; antitumor activity; apoptosis; derivatives; heterocyclic moiety; metastasis; molecular docking; oxadiazole; target prediction
Mesh:
Substances:
Year: 2020 PMID: 32429154 PMCID: PMC7279002 DOI: 10.3390/ijms21103511
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Structures of semisynthetic derivatives of natural compounds bearing oxadiazole (A,B,D,E,G–J) and amidoxime (C,F) moieties that display promising antitumor activity.
Scheme 1Synthesis of compounds 3a-h–5a-h. Reagents and conditions: (a) N,N′-carbonyldiimidazole (CDI), CH2Cl2, r.t., 2 h; then corresponding amidoxime R-C(=NOH)NH2 2a-h, r.t., overnight; (b) tetrabutylammonium fluoride (TBAF), tetrahydrofuran (THF), reflux, 1–2 h; (c) KOH, MeOH, reflux, 1–2 h.
Cytotoxicity of novel 18βH-glycyrrhetinic acid (GA) derivatives.
| Compound | IC50, µM | |||||
|---|---|---|---|---|---|---|
| Duodenum | Cervix | Cervix | Melanoma | Lung | Fibroblast | |
| HuTu-80 | HeLa | KB-3-1 | B16 | A549 | hFF3 | |
|
| 2.9 ± 0.1 | 12.7 ± 1.1 | 7.4 ± 0.6 | 11.5 ± 1.5 | 15.9 ± 2.3 | 13.6 ± 2.2 |
|
| 1.6 ± 0.5 | 0.9 ± 0.1 | 0.9 ± 0.1 | 0.9 ± 0.1 | 1.2 ± 0.1 | 9.8 ± 1.0 |
|
| 2.3 ± 0.1 | 2.6 ± 0.1 | 5.9 ± 0.2 | 6.8 ± 0.2 | 2.6 ± 0.1 | 1.7 ± 0.1 |
|
| 2.4 ± 0.2 | 3.3 ± 0.2 | 6.7 ± 0.7 | 7.2 ± 0.6 | 7.3 ± 3.0 | 2.9 ± 0.3 |
|
| 2.1 ± 0.2 | 3.0 ± 0.2 | 4.9 ± 0.4 | 5.6 ± 0.2 | 2.6 ± 0.1 | 2.6 ± 0.1 |
|
| >50 | >50 | >50 | >50 | >50 | >50 |
|
| 7.5 ± 0.1 | 5.8 ± 0.8 | 16.0 ± 1.4 | 16.4 ± 0.7 | 4.9 ± 0.4 | 7.3 ± 0.3 |
|
| 6.9 ± 0.3 | 6.4 ± 1.0 | 10.9 ± 2.2 | 22.5 ± 3.1 | 7.7 ± 1.8 | 7.6 ± 1.0 |
|
| 4.9 ± 0.3 | 6.1 ± 1.0 | 10.0 ± 0.9 | 8.9 ± 1.1 | 5.6 ± 0.9 | 8.5 ± 0.3 |
|
| 5.6 ± 0.1 | 7.1 ± 1.4 | 7.0 ± 1.4 | 7.8 ± 1.9 | 7.1 ± 1.6 | 11.1 ± 0.5 |
|
| 11.4 ± 1.0 | 17.9 ± 7.7 | 10.3 ± 1.2 | 6.0 ± 2.3 | 40.3 ± 4.1 | 11.5 ± 1.0 |
|
| 5.8 ± 0.5 | >50 | 9.5 ± 0.5 | >50 | 49.7 ± 4.5 | >50 |
|
| 49.7 ± 2.4 | >50 | >50 | >50 | >50 | >50 |
|
| 9.5 ± 0.5 | 2.6 ± 0.1 | 5.9 ± 0.1 | 6.6 ± 0.1 | 4.5 ± 1.1 | 5.6 ± 1.0 |
|
| 8.8 ± 1.1 | 3.7 ± 0.9 | 22.3 ± 3.7 | 11.3 ± 1.9 | 23.5 ± 6.3 | 21.6 ± 3.4 |
|
| >50 | 20.3 ± 2.2 | >50 | >50 | >50 | >50 |
|
| 3.8 ± 0.3 | 3.6 ± 0.5 | 4.7 ± 0.1 | 9.4 ± 0.4 | >50 | >50 |
|
| 4.7 ± 0.2 | 4.6 ± 0.3 | 16.9 ± 1.4 | >50 | >50 | >50 |
|
| 4.7 ± 0.4 | 3.5 ± 0.1 | 4.9 ± 0.3 | >50 | >50 | >50 |
Figure 2Cytotoxic profiles of novel GA derivatives. (A) Hierarchical clustering of IC50 values of investigated compounds using Euclidean distance. (B) Heatmap illustrating the antitumor selectivity of action of the investigated derivatives. Selectivity index (SI) was calculated as the ratio of IC50 values in normal hFF3 fibroblasts to the IC50 values in corresponding malignant cells.
Figure 3Compound 5f induces mitochondrial caspase-dependent apoptosis in HeLa cells. (A) Compound 5f causes externalization of phosphatidylserine. HeLa cells were treated by 5f at indicated concentrations for 48 h, stained by annexin V-fluorescein isothiocyanate (annexin V FITC)/ propidium iodide (PI), and analyzed by flow cytometry. (B) Compound 5f stimulates the dissipation of mitochondrial membrane potential in HeLa cells. Tumor cells were treated by 5f as in (A), followed by staining of cells with JC-1 and flow cytometry analysis. (C) Compound 5f activates the caspase cascade. HeLa cells were treated by 5f similarly to (A), followed by labeling of active caspases by fluorescein isothiocyanate (FITC) conjugate of the cell-permeable pancaspase inhibitor VAD-FMK (FITC-VAD-FMK) and flow cytometry analysis. (D) Compound 5f increases the activity of executioner caspases-3/7. HeLa cells were treated by 5f at indicated concentrations for 48 h followed, by measurement of the levels of activity for caspases-3/7 using a Caspase-Glo ® 3/7 Assay kit (Promega, Madison, WI, USA).
Figure 4Compound 5f displays significant antimetastatic potential. (A) Compound 5f inhibits the clonogenic activity of HeLa cells. HeLa cells were seeded at a low density and treated by 5f (0.25, 0.5 µM) for 14 days followed by fixation of the cells and their staining with crystal violet. The assessment of the colony formation level was carried out using a ColonyArea ImageJ plugin. (B) Compound 5f inhibits the motility of HeLa cells. HeLa cells were seeded into the upper chamber of the cell invasion/migration (CIM)-Plate and treated by 5f at 0.5 µM for 48 h. FBS-mediated migration of the cells to the lower chamber was analyzed by impedance measurement in real time regimen using the xCELLigence Real-Time Cell Analyzer Dual Plates (RTCA DP) system. (C) Administration of 5f significantly suppresses the metastatic growth of B16 melanoma in vivo. Compound 5f (50 mg/kg) was intraperitoneally injected in B16 melanoma-bearing mice five times. At day 14 after tumor cell transplantation, mice were sacrificed and a number of surface metastases in the lungs were counted. Then, 10% Tween-80 in physiological salt solution was used as the vehicle. (D) Metastatic inhibition indexes (MII) of mice treated by a vehicle or compound 5f. MIIs were calculated relatively to control B16 melanoma-bearing untreated mice. (E) Compound 5f does not cause toxic effects in mice. Liver, kidney, spleen, and thymus indexes of mice in tested groups were calculated relative to the organ indexes of healthy mice.
Figure 5Compound 3d displays significant dose-dependent anti-inflammatory activity in vitro. (A) The heatmap showed the probability of the anti-inflammatory potential of novel GA derivatives. The bioactivities of compounds were predicted using the PASS Online platform. Inflammation-related terms “anti-inflammatory” (anti-Inflam) and “nitric oxide antagonist” (anti-NO) were showed. Pa and Pi represent the probability of tested compounds “to be active” or “to be inactive”, respectively. (B) Compound 3d is nontoxic to HeLa cells. HeLa cells were incubated in the presence of 3d (10-50 µM) for 24 h followed by analysis of cell viability by MTT assay. (C) Compound 3d dose-dependently inhibits production of TNF-α by IFNγ-stimulated RAW264.7 cells. The cells were co-treated by IFN-γ (20 nM) and 3d (10-50 µM) for 24 h, after which the concentration of TNF-α in culture medium was measured using ELISA. (D) Compound 3d dose-dependently suppresses production of NO through inflamed macrophages. RAW264.7 cells were co-treated by IFN-γ (20 nM) and 3d (10-50 µM) for 24 h, followed by the measurement of nitrite concentration in culture medium by Griess reaction.
Figure 6Compound 3d effectively inhibits carrageenan-induced inflammation in vivo. (A) Compound 3d suppresses carrageenan-induced paw edema in mice. Compound 3d (50 mg/kg) was administered in sesame oil (vehicle) to mice via gastric gavage 1 h prior to carrageenan (CRG) injection, followed by the measurement of edema weight 5 h after induction of paw inflammation. Indomethacin (IM, 20 mg/kg) was used as a reference drug. (B) Histology of healthy footpads and footpads with carrageenan-induced paw edema after administration of 3d, IM, and vehicle. Hematoxylin and eosin staining. Original magnification of ×100 (top panel) and ×400 (bottom panel). The arrows indicate inflammatory infiltration of paw tissues. Black boxes show areas that were examined further at a higher magnification. (C) Compound 3d inhibits carrageenan-induced peritonitis in mice. Compound 3d (50 mg/kg) in 10% Tween-80 (vehicle) was intraperitoneally injected into mice 1 h prior to peritonitis induction, followed by the counting of leukocytes in peritoneal fluid. Control–uninflamed mice injected only by saline. Dexamethasone (DEX, 1 mg/kg) was used as a reference drug. (D) Compound 3d blocks neutrophil migration into carrageenan-inflamed peritoneum. The distribution of leukocyte subpopulations was measured by microscopy after staining of peritoneal cells with azur–eosin by Romanovsky–Giemsa.
Predicted probable primary targets of compound 3d.
| ID | Name |
|---|---|
| Ache | Acetylcholinesterase |
| Alox5 | Arachidonate 5-Lipoxygenase |
| Ca1 | Carbonic Anhydrase 1 |
| Ca2 | Carbonic Anhydrase 2 |
| Ca9 | Carbonic Anhydrase 9 |
| Cnr2 | Cannabinoid Receptor 2 |
| Cyp17a1 | Cytochrome P450 Family 17 Subfamily A Member 1 |
| Cyp19a1 | Cytochrome P450 Family 19 Subfamily A Member 1 |
| Cyp3a4 | Cytochrome P450 Family 3 Subfamily A Member 4 |
| Elane | Neutrophil Elastase |
| F10 | Coagulation Factor X |
| F2 | Thrombin |
| Hsd11b1 | Hydroxysteroid 11-Beta Dehydrogenase 1 |
| Hsd11b2 | Hydroxysteroid 11-Beta Dehydrogenase 2 |
| Ikbkb | Inhibitor Of Nuclear Factor Kappa B Kinase Subunit Beta |
| Mmp9 | Matrix Metalloproteinase 9 |
| Nr1h4 | Farnesoid X Receptor |
| Ptges | Prostaglandin E Synthase |
| Slco1b1 | Solute Carrier Organic Anion Transporter Family Member 1B1 |
| Slco1b3 | Solute Carrier Organic Anion Transporter Family Member 1B3 |
Figure 7Probable primary protein targets of compound 3d and their association with inflammatory response in mice. Probable targets of 3d listed in a table were predicted using Naïve–Bayes machine learning together with nearest neighbor (NN) search in Polypharmacology Browser 2.0. The protein–protein interaction network was reconstructed with rodent inflammatome-associated genes and revealed probable targets of 3d by using the Search Tool for Retrieval of Interacting Genes/Proteins (STRING) database (confidence score ≥0.7) in Cytoscape.
Figure 8MMP9, neutrophil elastase (ELANE), and F2 are probable primary targets of compound 3d. (A) Binding energies of 3d and known inhibitors, with the top 5 probable targets of 3d being the most associated with rodent inflammatome. The binding energies were calculated by Autodock Vina. (B) The mode of binding of 3d to MMP9, neutrophil elastase (ELANE), and thrombin (F2). Stereo presentations of the docked pose of 3d in the mentioned proteins superimposed on corresponding inhibitor-bound structures were created using BIOVIA Discovery Studio. Structures of 3d and inhibitors are depicted in blue and yellow sticks, respectively. The 2D representations of docked poses of 3d in MMP9, ELANE, and F2 were depicted using LigPlot+. The green lines and combs represent hydrogen bonds and hydrophobic interactions, respectively. Common amino acid residues, interacting with both 3d and corresponding inhibitors, are highlighted in red circles.