Literature DB >> 3242867

Presence of a 16S rRNA pseudogene in the bi-molecular plastid genome of the primitive brown alga Pylaiella littoralis. Evolutionary implications.

Y Markowicz1, S Loiseaux-de Goër, R Mache.   

Abstract

The plastid genome of the brown alga Pylaiella littoralis (L.) Kjellm. is composed of two different circular DNA molecules: the largest carries two rrn operons, and the smallest, only one copy of both 16S and 23S rDNAs. 16S rDNA copies located on both molecules have been cloned and their nucleotide sequences determined: they are 65% homologous to one another. The expression of these genes was assayed by hybridizing in vivo labelled P. littoralis rRNAs to both clones, and specific oligonucleotides to total RNA from P. littoralis. Results indicate that the 16S rDNA copy located on the small molecule is a pseudogene. Comparisons of the functional gene with other 16S rRNA genes shows that chloroplasts from green plants emerged earlier from the cyanobacterial lineage than Euglena gracilis and Pylaiella littoralis plastids.

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Year:  1988        PMID: 3242867     DOI: 10.1007/bf00434086

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  29 in total

1.  Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1,5-bisphosphate carboxylase and the 32,000-dalton Q(B) protein: Phylogenetic implications.

Authors:  M Reith; R A Cattolico
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

2.  Sequencing of the 3'-terminal region of a 16S rRNA gene from Zea mays chloroplast reveals homology with E. coli 16S rRNA.

Authors:  Z Schwarz; H Köessel
Journal:  Nature       Date:  1979-06-07       Impact factor: 49.962

3.  A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins.

Authors:  W F Jacob; M Santer; A E Dahlberg
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

Review 4.  Structural diversity of eukaryotic small subunit ribosomal RNAs. Evolutionary implications.

Authors:  M L Sogin; J H Gunderson
Journal:  Ann N Y Acad Sci       Date:  1987       Impact factor: 5.691

5.  Partial sequences of 16S rRNA and the phylogeny of blue-green algae and chloroplasts.

Authors:  L Bonen; W F Doolittle
Journal:  Nature       Date:  1976-06-24       Impact factor: 49.962

6.  Structure and transcription of the spinach chloroplast rDNA leader region.

Authors:  J F Briat; M Dron; S Loiseaux; R Mache
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

7.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

8.  Dinoflagellate 17S rRNA sequence inferred from the gene sequence: Evolutionary implications.

Authors:  M Herzog; L Maroteaux
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

9.  Analysis of closely related genes by the use of synthetic oligonucleotide probes labeled to a high specific activity.

Authors:  L Hellman; U Pettersson
Journal:  Gene Anal Tech       Date:  1987 Jan-Feb

10.  A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit.

Authors:  R Brimacombe; J Atmadja; W Stiege; D Schüler
Journal:  J Mol Biol       Date:  1988-01-05       Impact factor: 5.469

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  12 in total

Review 1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; P De Rijk; A Goris; R De Wachter
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Sequence, proposed secondary structure, and phylogenetic analysis of the chloroplast 5S rRNA gene of the brown alga Pylaiella littoralis (L.) Kjellm.

Authors:  C C Somerville; S Jouannic; S Loiseaux-de Goër
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

Review 3.  The chloroplast genome.

Authors:  M Sugiura
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

4.  Molecular evidence for the origin of plastids from a cyanobacterium-like ancestor.

Authors:  S E Douglas; S Turner
Journal:  J Mol Evol       Date:  1991-09       Impact factor: 2.395

5.  Plastid DNA from Pyrenomonas salina (Cryptophyceae): physical map, genes, and evolutionary implications.

Authors:  M Maerz; J Wolters; C J Hofmann; P Sitte; U G Maier
Journal:  Curr Genet       Date:  1992-01       Impact factor: 3.886

6.  Plastid genomes of the Rhodophyta and Chromophyta constitute a distinct lineage which differs from that of the Chlorophyta and have a composite phylogenetic origin, perhaps like that of the Euglenophyta.

Authors:  Y Markowicz; S Loiseaux-de Goër
Journal:  Curr Genet       Date:  1991-11       Impact factor: 3.886

7.  Evidence for a composite phylogenetic origin of the plastid genome of the brown alga Pylaiella littoralis (L.) Kjellm.

Authors:  N E Assali; R Mache; S Loiseaux-de Goër
Journal:  Plant Mol Biol       Date:  1990-08       Impact factor: 4.076

Review 8.  Chloroplast ribosomes and protein synthesis.

Authors:  E H Harris; J E Boynton; N W Gillham
Journal:  Microbiol Rev       Date:  1994-12

9.  Structure and expression of a plastid-encoded groEL homologous heat-shock gene in a thermophilic unicellular red alga.

Authors:  U Maid; R Steinmüller; K Zetsche
Journal:  Curr Genet       Date:  1992-05       Impact factor: 3.886

10.  Secondary structure and phylogeny of the chloroplast 23S rRNA gene from the brown alga Pylaiella littoralis.

Authors:  C C Somerville; S Jouannic; W F Martin; B Kloareg; S Loiseaux-de Goër
Journal:  Plant Mol Biol       Date:  1993-03       Impact factor: 4.076

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