Literature DB >> 32418209

Circles of Life: linking metabolic and epigenetic cycles to immunity.

Chan-Wang Jerry Lio1,2, Stanley Ching-Cheng Huang3,4.   

Abstract

Metabolites are the essential substrates for epigenetic modification enzymes to write or erase the epigenetic blueprint in cells. Hence, the availability of nutrients and activity of metabolic pathways strongly influence the enzymatic function. Recent studies have shed light on the choreography between metabolome and epigenome in the control of immune cell differentiation and function, with a major focus on histone modifications. Yet, despite its importance in gene regulation, DNA methylation and its relationship with metabolism is relatively unclear. In this review, we will describe how the metabolic flux can influence epigenetic networks in innate and adaptive immune cells, with a focus on the DNA methylation cycle and the metabolites S-adenosylmethionine and α-ketoglutarate. Future directions will be discussed for this rapidly emerging field.
© 2020 John Wiley & Sons Ltd.

Entities:  

Keywords:  5-hydroxymethylcytosine; B cells; DNA methylation; DNA methyltransferases; Krebs cycle; T cells; epigenetics; immunometabolism; macrophages; mitochondria; one-carbon metabolism; ten-eleven translocation

Mesh:

Substances:

Year:  2020        PMID: 32418209      PMCID: PMC7576883          DOI: 10.1111/imm.13207

Source DB:  PubMed          Journal:  Immunology        ISSN: 0019-2805            Impact factor:   7.397


  97 in total

1.  A critical role for Dnmt1 and DNA methylation in T cell development, function, and survival.

Authors:  P P Lee; D R Fitzpatrick; C Beard; H K Jessup; S Lehar; K W Makar; M Pérez-Melgosa; M T Sweetser; M S Schlissel; S Nguyen; S R Cherry; J H Tsai; S M Tucker; W M Weaver; A Kelso; R Jaenisch; C B Wilson
Journal:  Immunity       Date:  2001-11       Impact factor: 31.745

Review 2.  Epigenetic control of myeloid cell differentiation, identity and function.

Authors:  Damiana Álvarez-Errico; Roser Vento-Tormo; Michael Sieweke; Esteban Ballestar
Journal:  Nat Rev Immunol       Date:  2015-01       Impact factor: 53.106

3.  TET enzymes augment activation-induced deaminase (AID) expression via 5-hydroxymethylcytosine modifications at the Aicda superenhancer.

Authors:  Chan-Wang J Lio; Vipul Shukla; Daniela Samaniego-Castruita; Edahi González-Avalos; Abhijit Chakraborty; Xiaojing Yue; David G Schatz; Ferhat Ay; Anjana Rao
Journal:  Sci Immunol       Date:  2019-04-26

Review 4.  α-Ketoglutarate dehydrogenase: a mitochondrial redox sensor.

Authors:  Aaron L McLain; Pamela A Szweda; Luke I Szweda
Journal:  Free Radic Res       Date:  2010-11-29

Review 5.  Navigating metabolic pathways to enhance antitumour immunity and immunotherapy.

Authors:  Xiaoyun Li; Mathias Wenes; Pedro Romero; Stanley Ching-Cheng Huang; Sarah-Maria Fendt; Ping-Chih Ho
Journal:  Nat Rev Clin Oncol       Date:  2019-07       Impact factor: 66.675

6.  Identification of DNA methyltransferase 3a as a T cell receptor-induced regulator of Th1 and Th2 differentiation.

Authors:  Christopher J Gamper; Agoston T Agoston; William G Nelson; Jonathan D Powell
Journal:  J Immunol       Date:  2009-07-22       Impact factor: 5.422

7.  Antigen receptor control of methionine metabolism in T cells.

Authors:  Linda V Sinclair; Andrew Jm Howden; Alejandro Brenes; Laura Spinelli; Jens L Hukelmann; Andrew N Macintyre; Xiaojing Liu; Sarah Thomson; Peter M Taylor; Jeffrey C Rathmell; Jason W Locasale; Angus I Lamond; Doreen A Cantrell
Journal:  Elife       Date:  2019-03-27       Impact factor: 8.140

8.  TET enzymes control antibody production and shape the mutational landscape in germinal centre B cells.

Authors:  Katia Schoeler; Andreas Aufschnaiter; Simon Messner; Emmanuel Derudder; Sebastian Herzog; Andreas Villunger; Klaus Rajewsky; Verena Labi
Journal:  FEBS J       Date:  2019-06-03       Impact factor: 5.542

9.  Plasma cell differentiation is coupled to division-dependent DNA hypomethylation and gene regulation.

Authors:  Benjamin G Barwick; Christopher D Scharer; Alexander P R Bally; Jeremy M Boss
Journal:  Nat Immunol       Date:  2016-08-08       Impact factor: 25.606

10.  Serine starvation induces stress and p53-dependent metabolic remodelling in cancer cells.

Authors:  Oliver D K Maddocks; Celia R Berkers; Susan M Mason; Liang Zheng; Karen Blyth; Eyal Gottlieb; Karen H Vousden
Journal:  Nature       Date:  2012-12-16       Impact factor: 49.962

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  12 in total

1.  Metabolic mediators: How immunometabolism directs the immune response to infection.

Authors:  Eyal Amiel; Georgia Perona-Wright
Journal:  Immunology       Date:  2020-11       Impact factor: 7.397

Review 2.  Mitochondria signaling to the epigenome: A novel role for an old organelle.

Authors:  Janine Hertzog Santos
Journal:  Free Radic Biol Med       Date:  2020-12-01       Impact factor: 7.376

Review 3.  Micro but mighty-Micronutrients in the epigenetic regulation of adaptive immune responses.

Authors:  Heng-Yi Chen; Michael Hsu; Chan-Wang Jerry Lio
Journal:  Immunol Rev       Date:  2021-11-24       Impact factor: 12.988

4.  Epigenetic remodeling by vitamin C potentiates plasma cell differentiation.

Authors:  Heng-Yi Chen; Ana Almonte-Loya; Fang-Yun Lay; Michael Hsu; Eric Johnson; Edahí González-Avalos; Jieyun Yin; Richard S Bruno; Qin Ma; Hazem E Ghoneim; Daniel J Wozniak; Fiona E Harrison; Chan-Wang Jerry Lio
Journal:  Elife       Date:  2022-09-07       Impact factor: 8.713

5.  Cystathionine γ-lyase exacerbates Helicobacter pylori immunopathogenesis by promoting macrophage metabolic remodeling and activation.

Authors:  Yvonne L Latour; Johanna C Sierra; Jordan L Finley; Mohammad Asim; Daniel P Barry; Margaret M Allaman; Thaddeus M Smith; Kara M McNamara; Paula B Luis; Claus Schneider; Justin Jacobse; Jeremy A Goettel; M Wade Calcutt; Kristie L Rose; Kevin L Schey; Ginger L Milne; Alberto G Delgado; M Blanca Piazuelo; Bindu D Paul; Solomon H Snyder; Alain P Gobert; Keith T Wilson
Journal:  JCI Insight       Date:  2022-06-22

6.  Integrated metabolism and epigenetic modifications in the macrophages of mice in responses to cold stress.

Authors:  Jingjing Lu; Shoupeng Fu; Jie Dai; Jianwen Hu; Shize Li; Hong Ji; Zhiquan Wang; Jiahong Yu; Jiming Bao; Bin Xu; Jingru Guo; Huanmin Yang
Journal:  J Zhejiang Univ Sci B       Date:  2022-06-15       Impact factor: 5.552

7.  PERK is a critical metabolic hub for immunosuppressive function in macrophages.

Authors:  Lydia N Raines; Haoxin Zhao; Yuzhu Wang; Heng-Yi Chen; Hector Gallart-Ayala; Pei-Chun Hsueh; Wei Cao; Yeojung Koh; Ana Alamonte-Loya; Pu-Ste Liu; Julijana Ivanisevic; Chan-Wang Jerry Lio; Ping-Chih Ho; Stanley Ching-Cheng Huang
Journal:  Nat Immunol       Date:  2022-02-28       Impact factor: 31.250

8.  Sweet talk: Metabolic conversations between host and microbe during infection.

Authors:  Eyal Amiel; Georgia Perona-Wright
Journal:  Immunology       Date:  2021-02       Impact factor: 7.397

Review 9.  Role of Epigenetics in the Regulation of Immune Functions of the Skin.

Authors:  Yu Sawada; Richard L Gallo
Journal:  J Invest Dermatol       Date:  2020-11-27       Impact factor: 8.551

Review 10.  Molecular Chaperones: Molecular Assembly Line Brings Metabolism and Immunity in Shape.

Authors:  Haoxin Zhao; Lydia N Raines; Stanley Ching-Cheng Huang
Journal:  Metabolites       Date:  2020-10-03
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