| Literature DB >> 32413170 |
Amir Arastehfar1,2, Farnaz Daneshnia1, Mohammadreza Salehi3, Melike Yaşar4, Tuğrul Hoşbul5, Macit Ilkit6, Weihua Pan1, Ferry Hagen2,7,8, Nazlı Arslan9, Hatice Türk-Dağı10, Süleyha Hilmioğlu-Polat4, David S Perlin11, Cornelia Lass-Flörl12.
Abstract
BACKGROUND: Candida glabrata is the third leading cause of candidaemia in Turkey; however, the data regarding antifungal resistance mechanisms and genotypic diversity in association with their clinical implication are limited.Entities:
Keywords: zzm321990Candida glabratazzm321990; antifungal agents; candidaemia; drug resistance; genotype; molecular typing
Mesh:
Substances:
Year: 2020 PMID: 32413170 PMCID: PMC7497236 DOI: 10.1111/myc.13104
Source DB: PubMed Journal: Mycoses ISSN: 0933-7407 Impact factor: 4.377
MICs of antifungal agents used against 107 Candida glabrata isolates
| Antifungal agent | Minimum inhibitory concentration (µg/ml) | MIC50 | MIC90 | GM | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.016 | 0.032 | 0.06 | 0.12 | 0.25 | 0.5 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | ||||
| Fluconazole | 1 | 23 | 29 | 47 | 1 | 2 | 4 | 8 | 64 | 2.86 | ||||||
| Voriconazole | 106 | 1 | 0.032 | 0.125 | 0.032 | |||||||||||
| Itraconazole | 52 | 39 | 11 | 5 | 0.125 | 0.25 | 0.125 | |||||||||
| Micafungin | 103 | 2 | 2 | 0.016 | 0.016 | 0.063 | ||||||||||
| Anidulafungin | 1 | 73 | 29 | 2 | 2 | 0.03 | 0.06 | 0.063 | ||||||||
| Amphotericin B | 2 | 8 | 91 | 5 | 1 | 0.5 | 1 | 1 | ||||||||
Two isolates showing intermediate phenotype for micafungin (0.125 µg/mL) and anidulafungin (0.25 µg/mL) became resistant against both antifungals after 48 incubation (G53; 0.5 µg/mL and G103; 2 µg/mL).
FIGURE 1Mutations in the Pdr1p protein of Candida glabrata isolates. Amino acid changes observed in the isolates with high FLZ MIC values (≥32 µg/mL) are highlighted in orange colour. BD, DNA‐binding domain; MHD, middle homology domain; ID, inhibitory domain; and AD, activator domain
FLZ MICs for isolates carrying Pdr1p mutations, MICs ≥ 64 µg/mL was considered to indicate FLZ resistance
| Amino acid change | Resistance % | Fluconazole minimum inhibitory concentration (µg/mL) | Total | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 0.5 | 1 | 2 | 4 | 8 | 16 | 32 | 64 | |||
| Wild type | 0 | 1 | 1 | 2 | ||||||
| S76P, V91I, L98S, T143P, 226‐Ins_KLTQAVN‐227 | 100 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, P695R | 100 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, N768I | 100 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, F439I, D554E, E590D, P927R | 100 | 1 | 1 | |||||||
| L98S, V91I, D243N, L281V, E590D | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P | 0 | 11 | 9 | 25 | 1 | 46 | ||||
| S76P, V91I, L98S, T143P, V582A, E590D | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, E590D | 0 | 5 | 4 | 4 | 13 | |||||
| V91I, L98S, T143P, E590D | 0 | 1 | 2 | 3 | ||||||
| T143P, E590D | 0 | 3 | 4 | 2 | 9 | |||||
| T143P | 0 | 1 | 5 | 2 | 8 | |||||
| V91I, L98S, D243N | 0 | 1 | 1 | 6 | 8 | |||||
| T143P, D243N, E590D | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, I380L, K704N | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, E590D, N791Y | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, D810E, Y811N | 0 | 1 | 1 | |||||||
| S76P, V91I, T143P | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, S316I | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, M774I, V775L | 0 | 1 | 1 | |||||||
| V91I, T143P, E590D | 0 | 1 | 1 | |||||||
| T143P, E590V | 0 | 1 | 1 | |||||||
| T143P, D243N | 0 | 2 | 2 | |||||||
| T143P, E590D, R593P | 0 | 1 | 1 | |||||||
| S76P, V91I, L98S, T143P, E590V | 0 | 1 | 1 | |||||||
| Total | 4/107 | 1 | 22 | 30 | 47 | 1 | 2 | 4 | 107 | |
Seven amino acids were inserted between amino acids 226‐227.
Clinical characteristics of patients infected with Candida glabrata isolates showing FLZ MIC values ≥ 32 µg/mL and/or harbouring HS1‐Fks1/2 mutations
| Patient # | Age/sex (y) | Underlying diseases | Risk factors | Prophylaxis/Empiric | MAF | AAF | Outcome | C/G | Pdr1p AAC | Fksp AAC | MIC (µg/mL) | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| FLZ | MCF | AND | AMB | |||||||||||
| G6 |
NA (2006) | NA | NA | NA | NA | NA | Died | C5/G23 | P695R | WT | 64 | 0.016 | 0.032 | 0.5 |
| G29 |
56/M (2017) | Chronic viral hepatitis B, diabetes mellitus, atrophic left kidney | Abdominal and liver abscesses, CVC, BSAT | FLZ (first dosage 800 mg/d followed by 400 mg/d for 32 d), AND (unknown dosage for 7 d) → TF and PF | Ambisome (3 mg/kg for 20 d) | NO | Died | C2/G11 | NSAAC | S629T (HS1‐Fks1) | 1 | 0.016 | 0.064 | 0.5 |
| G51 |
60/M (2019) | Pancreatic cancer and chronic gastritis | CVC, BSAT | FLZ (first dosage 800 mg/d followed by 400 mg/d for 13 d) → TF and PF | AND (200 mg/d for 4 d) | NO | Died | C7/G28 | NSAAC | WT | 32 | 0.016 | 0.064 | 0.5 |
| G53 |
63/M (2019) | Diabetes mellitus, chronic obstructive pulmonary disease, hypertension, acute atrial fibrillation | Pleural puncture, PICVC, SVC, BSAT | MCF (100 mg/d for 3 d) → PF and TF but MCF was not changed | MCF (100 mg/d for 82 d) | NO | Died | C8/G30 | NSAAC | S663P (HS1‐Fks2) | 4 | 0.125 | 0.25 | 0.5 |
|
G55 |
76/M (2016) | Ovarian cancer, cardiac problems, hypertension, chronic renal failure and bacterial infection | Cholecystectomy, CVC, BSAT | FLZ (200 mg/d for 31 d) → TF and PF | Ambisome (3 mg/kg) + AND (100 mg/d) for 13 d | NO | Survived | C8/G32 | N768I | WT | 64 | 0.016 | 0.064 | 0.5 |
| G98 |
13/F (2017) | Acute myeloid leukaemia | Bone marrow transplantation, CVC, BSAT | Posaconazole (200 mg/d, for 3 d) | Caspofungin (50 mg/d for 40 d) | NO | Died | C8/G30 | L281V | WT | 32 | 0.016 | 0.032 | 0.5 |
| G103 |
22/F (2018) | Acute myeloid leukaemia | JVC, BSAT | Caspofungin (70 mg/d for 6 d) → TF and PF | FLZ (200 mg d for 4 d) → TF and PF | AMB (200 mg/d first dosage and continued with 3 mg/kg for 7 d) → TF and PF → AMB (3 mg/kg) + voriconazole (dosage unknown) for 7 d | Died | C1/G1 | 226‐Ins_KLTQAVN‐227 | S663P (HS1‐Fks2) | 64 | 0.125 | 0.25 | 0.5 |
| G107 |
78/M (2019) | Acute renal failure, upper gastrointestinal bleeding, and pneumonia | FC, UC, PICVC, BSAT | NO | FLZ (400 mg d for 3 d) → TF and PF | AMB (200 mg/d for 2 d) | Died | C3/G15 | F439I, D554E, P927R | WT | 64 | 0.016 | 0.064 | 0.5 |
Main treatment was defined as the first‐choice antifungal therapy followed by blood culture; persistent fever was defined as TF despite antifungal therapy (prophylactic or main). Alternative antifungal treatments was provided in case of TF of the main treatment. Pdr1p mutations included only those occurring in the isolates with FLZ MIC ≥ 32 µg/mL. Risk factors do not include previous exposure to antifungals, which is mentioned separately.
Abbreviations: AA, Amino acid change; AAF, Alternative antifungal used due to therapeutic failure; AMB, Amphotericin B; AND, Anidulafungin; BSAT, Broad‐spectrum antiobiotic therapy; C/G, Cluster/Genotype; CVC, Central venous catheter; FC, Femoral catheter; FLZ, Fluconazole; JVC, Jugular venous catheter; MAF, Main antifungal; MCF, Micafungin; MIC, Minimum inhibitory concentration; NA, Not available; NSAAC, No specific amino acid change; PF, Persistent fever; PICVC, Peripherally inserted central venous catheter; SVC, Subclavian venous catheter; TF, Therapeutic failure; UC, Urine catheter; WT, Wild type.
FIGURE 2Minimum spanning tree illustrating the lack of clonal enrichment for isolates with FLZ MIC ≥ 32 µg/mL and/or mutations in HS1 of FKS1/2. All eight isolates, except for one without clinical data (marked red), showed azole and/or echinocandin TF