Literature DB >> 32409606

Genomic evidence for convergent evolution of gene clusters for momilactone biosynthesis in land plants.

Lingfeng Mao1, Hiroshi Kawaide2, Toshiya Higuchi3, Meihong Chen1, Koji Miyamoto4, Yoshiki Hirata2, Honoka Kimura2, Sho Miyazaki2, Miyu Teruya3, Kaoru Fujiwara3, Keisuke Tomita3, Hisakazu Yamane4, Ken-Ichiro Hayashi5, Hideaki Nojiri3, Lei Jia1, Jie Qiu1, Chuyu Ye1, Michael P Timko6, Longjiang Fan7, Kazunori Okada8.   

Abstract

Momilactones are bioactive diterpenoids that contribute to plant defense against pathogens and allelopathic interactions between plants. Both cultivated and wild grass species of Oryza and Echinochloa crus-galli (barnyard grass) produce momilactones using a biosynthetic gene cluster (BGC) in their genomes. The bryophyte Calohypnum plumiforme (formerly Hypnum plumaeforme) also produces momilactones, and the bifunctional diterpene cyclase gene CpDTC1/HpDTC1, which is responsible for the production of the diterpene framework, has been characterized. To understand the molecular architecture of the momilactone biosynthetic genes in the moss genome and their evolutionary relationships with other momilactone-producing plants, we sequenced and annotated the C. plumiforme genome. The data revealed a 150-kb genomic region that contains two cytochrome P450 genes, the CpDTC1/HpDTC1 gene and the "dehydrogenase momilactone A synthase" gene tandemly arranged and inductively transcribed following stress exposure. The predicted enzymatic functions in yeast and recombinant assay and the successful pathway reconstitution in Nicotiana benthamiana suggest that it is a functional BGC responsible for momilactone production. Furthermore, in a survey of genomic sequences of a broad range of plant species, we found that momilactone BGC is limited to the two grasses (Oryza and Echinochloa) and C. plumiforme, with no synteny among these genomes. These results indicate that while the gene cluster in C. plumiforme is functionally similar to that in rice and barnyard grass, it is likely a product of convergent evolution. To the best of our knowledge, this report of a BGC for a specialized plant defense metabolite in bryophytes is unique.

Entities:  

Keywords:  Bryophytes; convergent evolution; diterpene momilactones; gene cluster; specialized metabolites

Year:  2020        PMID: 32409606     DOI: 10.1073/pnas.1914373117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  Why are momilactones always associated with biosynthetic gene clusters in plants?

Authors:  Juan Zhang; Reuben J Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-02       Impact factor: 11.205

2.  Pathogen-induced biosynthetic pathways encode defense-related molecules in bread wheat.

Authors:  Guy Polturak; Martin Dippe; Michael J Stephenson; Rajesh Chandra Misra; Charlotte Owen; Ricardo H Ramirez-Gonzalez; John F Haidoulis; Henk-Jan Schoonbeek; Laetitia Chartrain; Philippa Borrill; David R Nelson; James K M Brown; Paul Nicholson; Cristobal Uauy; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-11       Impact factor: 12.779

3.  The emerging role of biosynthetic gene clusters in plant defense and plant interactions.

Authors:  Guy Polturak; Anne Osbourn
Journal:  PLoS Pathog       Date:  2021-07-02       Impact factor: 6.823

4.  Polyploidy underlies co-option and diversification of biosynthetic triterpene pathways in the apple tribe.

Authors:  Wenbing Su; Yi Jing; Shoukai Lin; Zhen Yue; Xianghui Yang; Jiabao Xu; Jincheng Wu; Zhike Zhang; Rui Xia; Jiaojiao Zhu; Ning An; Haixin Chen; Yanping Hong; Yuan Yuan; Ting Long; Ling Zhang; Yuanyuan Jiang; Zongli Liu; Hailan Zhang; Yongshun Gao; Yuexue Liu; Hailan Lin; Huicong Wang; Levi Yant; Shunquan Lin; Zhenhua Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-18       Impact factor: 11.205

5.  Rice contains a biosynthetic gene cluster associated with production of the casbane-type diterpenoid phytoalexin ent-10-oxodepressin.

Authors:  Jin Liang; Qinqin Shen; Liping Wang; Jiang Liu; Jingye Fu; Le Zhao; Meimei Xu; Reuben J Peters; Qiang Wang
Journal:  New Phytol       Date:  2021-05-13       Impact factor: 10.323

6.  Chromosome-Level Genome Assemblies of Two Hypnales (Mosses) Reveal High Intergeneric Synteny.

Authors:  Jin Yu; Yuqing Cai; Yixin Zhu; Yuying Zeng; Shanshan Dong; Kexin Zhang; Sibo Wang; Linzhou Li; Bernard Goffinet; Huan Liu; Yang Liu
Journal:  Genome Biol Evol       Date:  2022-02-04       Impact factor: 3.416

Review 7.  Pervasive genome duplications across the plant tree of life and their links to major evolutionary innovations and transitions.

Authors:  Xin Qiao; Shaoling Zhang; Andrew H Paterson
Journal:  Comput Struct Biotechnol J       Date:  2022-06-15       Impact factor: 6.155

Review 8.  Plant biosynthetic gene clusters in the context of metabolic evolution.

Authors:  Samuel J Smit; Benjamin R Lichman
Journal:  Nat Prod Rep       Date:  2022-07-20       Impact factor: 15.111

9.  Interdependent evolution of biosynthetic gene clusters for momilactone production in rice.

Authors:  Naoki Kitaoka; Juan Zhang; Richard K Oyagbenro; Benjamin Brown; Yisheng Wu; Bing Yang; Zhaohu Li; Reuben J Peters
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277

10.  An Independent Evolutionary Origin for Insect Deterrent Cucurbitacins in Iberis amara.

Authors:  Lemeng Dong; Aldo Almeida; Jacob Pollier; Bekzod Khakimov; Jean-Etienne Bassard; Karel Miettinen; Dan Stærk; Rahimi Mehran; Carl Erik Olsen; Mohammed Saddik Motawia; Alain Goossens; Søren Bak
Journal:  Mol Biol Evol       Date:  2021-10-27       Impact factor: 16.240

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