Literature DB >> 32392583

M6A2Target: a comprehensive database for targets of m6A writers, erasers and readers.

Shuang Deng, Hongwan Zhang, Kaiyu Zhu, Xingyang Li, Ying Ye, Rui Li, Xuefei Liu, Dongxin Lin, Zhixiang Zuo, Jian Zheng.   

Abstract

N6-methyladenosine (m6A) is the most abundant posttranscriptional modification in mammalian mRNA molecules and has a crucial function in the regulation of many fundamental biological processes. The m6A modification is a dynamic and reversible process regulated by a series of writers, erasers and readers (WERs). Different WERs might have different functions, and even the same WER might function differently in different conditions, which are mostly due to different downstream genes being targeted by the WERs. Therefore, identification of the targets of WERs is particularly important for elucidating this dynamic modification. However, there is still no public repository to host the known targets of WERs. Therefore, we developed the m6A WER target gene database (m6A2Target) to provide a comprehensive resource of the targets of m6A WERs. M6A2Target provides a user-friendly interface to present WER targets in two different modules: 'Validated Targets', referred to as WER targets identified from low-throughput studies, and 'Potential Targets', including WER targets analyzed from high-throughput studies. Compared to other existing m6A-associated databases, m6A2Target is the first specific resource for m6A WER target genes. M6A2Target is freely accessible at http://m6a2target.canceromics.org.
© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  eraser; m6A; reader; target; writer

Year:  2021        PMID: 32392583     DOI: 10.1093/bib/bbaa055

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  34 in total

1.  Integrated Analysis of the m6A-Related lncRNA Identified lncRNA ABALON/miR-139-3p/NOB1 Axis Was Involved in the Occurrence of Lung Cancer.

Authors:  Xinhong Liu; Xin Zuo; Lijun Ma; Qin Wang; Lilan Zhu; Li Li; Xin Zhao
Journal:  Cancer Manag Res       Date:  2021-11-23       Impact factor: 3.989

2.  m6A-express: uncovering complex and condition-specific m6A regulation of gene expression.

Authors:  Teng Zhang; Shao-Wu Zhang; Song-Yao Zhang; Shou-Jiang Gao; Yidong Chen; Yufei Huang
Journal:  Nucleic Acids Res       Date:  2021-11-18       Impact factor: 16.971

3.  RNA methylation regulators contribute to poor prognosis of hepatocellular carcinoma associated with the suppression of bile acid metabolism: a multi-omics analysis.

Authors:  Tao Zhang; Jian Gu; Xinyi Wang; Jiajia Luo; Jing Yan; Kailin Cai; Huili Li; Yingli Nie; Xiangdong Chen; Jiliang Wang
Journal:  Am J Cancer Res       Date:  2022-07-15       Impact factor: 5.942

4.  Bioinformatics-based analysis of SUMOylation-related genes in hepatocellular carcinoma reveals a role of upregulated SAE1 in promoting cell proliferation.

Authors:  Yang Liu; Xiang Wang; Xingzhi Zeng; Yinghua Wu; Xinrong Liu; Juan Tan; Xiaoyan Li
Journal:  Open Med (Wars)       Date:  2022-07-06

5.  m6A Topological Transition Coupled to Developmental Regulation of Gene Expression During Mammalian Tissue Development.

Authors:  Shanshan Li; Qing Yang; Rui Jiao; Pengfei Xu; Yazhou Sun; Xin Li
Journal:  Front Cell Dev Biol       Date:  2022-07-05

6.  The Hypoxic Landscape Stratifies Gastric Cancer Into 3 Subtypes With Distinct M6a Methylation and Tumor Microenvironment Infiltration Characteristics.

Authors:  Zhi-Kun Ning; Ce-Gui Hu; Jiang Liu; Hua-Kai Tian; Zhong-Lin Yu; Hao-Nan Zhou; Hui Li; Zhen Zong
Journal:  Front Immunol       Date:  2022-06-21       Impact factor: 8.786

Review 7.  m6A-modified circRNAs: detections, mechanisms, and prospects in cancers.

Authors:  Shiyi Qin; Qi Zhang; Yanhua Xu; Shuo Ma; Tianyi Wang; Yuejiao Huang; Shaoqing Ju
Journal:  Mol Med       Date:  2022-07-14       Impact factor: 6.376

8.  A m6Avalue predictive of prostate cancer stemness, tumor immune landscape and immunotherapy response.

Authors:  Cheng Zou; Qinju He; Yuqing Feng; Mengjie Chen; Dingxiao Zhang
Journal:  NAR Cancer       Date:  2022-03-25

Review 9.  Elucidating the Functions of Non-Coding RNAs from the Perspective of RNA Modifications.

Authors:  Venkata Naga Srikanth Garikipati; Shizuka Uchida
Journal:  Noncoding RNA       Date:  2021-05-11

Review 10.  Epigenetics: Roles and therapeutic implications of non-coding RNA modifications in human cancers.

Authors:  Dawei Rong; Guangshun Sun; Fan Wu; Ye Cheng; Guoqiang Sun; Wei Jiang; Xiao Li; Yi Zhong; Liangliang Wu; Chuanyong Zhang; Weiwei Tang; Xuehao Wang
Journal:  Mol Ther Nucleic Acids       Date:  2021-05-01       Impact factor: 8.886

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