Literature DB >> 32389811

Whole-genome sequencing of the endemic Antarctic fungus Antarctomyces pellizariae reveals an ice-binding protein, a scarce set of secondary metabolites gene clusters and provides insights on Thelebolales phylogeny.

Thiago Mafra Batista1, Heron Oliveira Hilario2, Gabriel Antônio Mendes de Brito2, Rennan Garcias Moreira3, Carolina Furtado4, Graciéle Cunha Alves de Menezes5, Carlos Augusto Rosa5, Luiz Henrique Rosa5, Glória Regina Franco2.   

Abstract

The snow-covered surfaces of Antarctica comprise an extreme environment that favors the development of life forms with adaptations to adverse low-temperature habitats. The ability to survive and such temperatures might involve the production of antifreeze proteins and ice-binding proteins that attenuate the effects of intense cold temperatures. He, we sequenced and reconstructed the nuclear and mitochondrial genomes of the endemic Antarctic fungus Antarctomyces pellizariae UFMGCB 12416. We then have identified a putative ice-binding protein-coding gene, mapped the presence of secondary metabolite gene clusters, and reconstructed the phylogenetic relationships of a A. pellizariae with others Leotiomycetes from the alignment of hundreds of orthologous single-copy proteins. Our results will deepen the understanding of microbial ice-binding proteins and the genomic aspects of psychrophilic fungi. DATASET: The GenBank/EMBL/DDBJ accession number for the gene sequence of ice-binding protein from A. pellizariae determined in this study is MN867686. The Whole Genome Shotgun project of strain A. pellizariae UFMGCB 12416 has been deposited at DDBJ/ENA/GenBank under accession WCAA00000000. The version described in this paper is version WCAA01000000. The mitochondrial genome has been deposited under accession MT197497.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Extremophile; Ice-binding protein; Psychrophilic; Thelebolales

Year:  2020        PMID: 32389811     DOI: 10.1016/j.ygeno.2020.05.004

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  4 in total

1.  Apothecial Ancestry, Evolution, and Re-Evolution in Thelebolales (Leotiomycetes, Fungi).

Authors:  Luis Quijada; Neven Matočec; Ivana Kušan; Joey B Tanney; Peter R Johnston; Armin Mešić; Donald H Pfister
Journal:  Biology (Basel)       Date:  2022-04-11

2.  The cold - resistance mechanism of a mutagenic Volvariella volvacea strain VH3 with outstanding traits revealed by transcriptome profiling.

Authors:  Peng Li; Cong Hu; Yujie Li; Lei Ge; Guogan Wu; Beibei Lv; Wei Jiang; Dandan Xi
Journal:  BMC Microbiol       Date:  2021-12-08       Impact factor: 3.605

3.  The Enigmatic Thelebolaceae (Thelebolales, Leotiomycetes): One New Genus Solomyces and Five New Species.

Authors:  Zhiyuan Zhang; Chunbo Dong; Wanhao Chen; Quanrong Mou; Xiaoxiao Lu; Yanfeng Han; Jianzhong Huang; Zongqi Liang
Journal:  Front Microbiol       Date:  2020-10-29       Impact factor: 5.640

Review 4.  Cold Adaptation Strategies and the Potential of Psychrophilic Enzymes from the Antarctic Yeast, Glaciozyma antarctica PI12.

Authors:  Nur Athirah Yusof; Noor Haza Fazlin Hashim; Izwan Bharudin
Journal:  J Fungi (Basel)       Date:  2021-06-30
  4 in total

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