Literature DB >> 32388570

Evaluation of the global performance of eight in silico skin sensitization models using human data.

Emily Golden1, Donna S Macmillan2, Greg Dameron3, Petra Kern3, Thomas Hartung1,4, Alexandra Maertens1.   

Abstract

Allergic contact dermatitis, or the clinical manifestation of skin sensitization, is a leading occupational hazard. Several testing approaches exist to assess skin sensitization, but in silico models are perhaps the most advantageous due to their high speed and low-cost results. Many in silico skin sensitization models exist, though many have only been tested against results from animal studies (e.g., LLNA); this creates uncertainty in human skin sensitization assessments in both a screening and regulatory context. This project’s aim was to evaluate the accuracy of eight in silico skin sensitization models against two human data sets: one highly curated (Basketter et al., 2014) and one screening level (HSDB). The binary skin sen­sitization status of each chemical in each of the two data sets was compared to the prediction from eight in silico skin sensitization tools (Toxtree, PredSkin, OECD’s QSAR Toolbox, UL’s REACHAcross™, Danish QSAR Database, TIMES-SS, and Lhasa Limited’s Derek Nexus). Models were assessed for coverage, accuracy, sensitivity, and specificity, as well as optimization features (e.g., probability of accuracy, applicability domain, etc.), if available. While there was a wide range of sensitivity and specificity, the models generally performed comparably to the LLNA in predicting human skin sensitization status (i.e., approximately 70-80% accuracy). Additionally, the models did not mispredict the same com­pounds, suggesting there might be an advantage in combining models. In silico skin sensitization models offer accurate and useful insights in a screening context; however, further improvements are necessary so these models may be con­sidered fully reliable for regulatory applications.

Entities:  

Keywords:  QSAR; read-across; skin sensitization; structural alerts

Year:  2020        PMID: 32388570     DOI: 10.14573/altex.1911261

Source DB:  PubMed          Journal:  ALTEX        ISSN: 1868-596X            Impact factor:   6.043


  6 in total

1.  PreS/MD: Predictor of Sensitization Hazard for Chemical Substances Released From Medical Devices.

Authors:  Vinicius M Alves; Joyce V B Borba; Rodolpho C Braga; Daniel R Korn; Nicole Kleinstreuer; Kevin Causey; Alexander Tropsha; Diego Rua; Eugene N Muratov
Journal:  Toxicol Sci       Date:  2022-09-24       Impact factor: 4.109

2.  An Evaluation of the Occupational Health Hazards of Peptide Couplers.

Authors:  Jessica C Graham; Alejandra Trejo-Martin; Martyn L Chilton; Jakub Kostal; Joel Bercu; Gregory L Beutner; Uma S Bruen; David G Dolan; Stephen Gomez; Jedd Hillegass; John Nicolette; Matthew Schmitz
Journal:  Chem Res Toxicol       Date:  2022-05-09       Impact factor: 3.973

3.  Mapping Chemical Respiratory Sensitization: How Useful Are Our Current Computational Tools?

Authors:  Emily Golden; Mikhail Maertens; Thomas Hartung; Alexandra Maertens
Journal:  Chem Res Toxicol       Date:  2020-12-15       Impact factor: 3.739

4.  Knowledge Organization Systems for Systematic Chemical Assessments.

Authors:  Paul Whaley; Stephen W Edwards; Andrew Kraft; Kate Nyhan; Andrew Shapiro; Sean Watford; Steve Wattam; Taylor Wolffe; Michelle Angrish
Journal:  Environ Health Perspect       Date:  2020-12-24       Impact factor: 9.031

5.  SkinSensPred as a Promising in Silico Tool for Integrated Testing Strategy on Skin Sensitization.

Authors:  Shan-Shan Wang; Chia-Chi Wang; Chun-Wei Tung
Journal:  Int J Environ Res Public Health       Date:  2022-10-07       Impact factor: 4.614

6.  A framework for chemical safety assessment incorporating new approach methodologies within REACH.

Authors:  Nicholas Ball; Remi Bars; Philip A Botham; Andreea Cuciureanu; Mark T D Cronin; John E Doe; Tatsiana Dudzina; Timothy W Gant; Marcel Leist; Bennard van Ravenzwaay
Journal:  Arch Toxicol       Date:  2022-02-01       Impact factor: 5.153

  6 in total

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