| Literature DB >> 32377222 |
Bei Hui1, Jia-Jun Qiu2, Jin-Heng Liu2, Neng-Wen Ke2.
Abstract
BACKGROUND: In a pathological examination of pancreaticoduodenectomy for pancreatic head adenocarcinoma, a resection margin without cancer cells in 1 mm is recognized as R0; a resection margin with cancer cells in 1 mm is recognized as R1. The preoperative identification of R0 and R1 is of great significance for surgical decision and prognosis. We conducted a preliminary radiomics study based on preoperative CT (computer tomography) images to evaluate a resection margin which was R0 or R1.Entities:
Mesh:
Year: 2020 PMID: 32377222 PMCID: PMC7182967 DOI: 10.1155/2020/2761627
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
Figure 1Radiomics framework.
Figure 2Choose three CT slices [11].
Figure 3Delineate a resection margin and segment it to form an ROI. (a) A portal-venous phase CT image located at the top of a pancreatic head tumor that belongs to R0. (b) A portal-venous phase CT image located at the top of a pancreatic head tumor that belongs to R1.
Figure 4A mask to be fitted and its boundaries. (a). A mask to be fitted: the region with values 1. (b) Boundaries of the mask, which consist of the points with values 1.
Figure 5Examples of fitting and enhancing. (a) An R0 ROI. (b) The fitted ROI of R0. (c) The enhanced and fitted ROI of R0. (d) An R1 ROI. (e) The fitted ROI of R1. (f) The enhanced and fitted ROI of R1.
Figure 6Processes of WF.
Figure 7Fractional differential operator M.
Texture analysis methods.
| Abbreviation | Description |
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| GH | Gray-level histogram. Feature names: mean; standard deviation; smoothness; cubic moment; uniformity; entropy; fourth moment |
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| GLCM | Gray-level co-occurrence matrix. Feature names: autocorrelation; cluster prominence; cluster shade; contrast; correlation; difference entropy; difference variance; dissimilarity; energy; entropy; homogeneity (inverse difference moment); information measure of correlation1; information measure of correlation2; inverse difference (homogeneity in matlab); maximum probability; sum average; sum entropy; sum of squares (variance); sum variance; Renyi entropy; Tsallis entropy |
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| GLRLM | Gray-level run-length matrix. Feature names: short run emphasis; long run emphasis; gray-level nonuniformity; run length nonuniformity; run percentage; low gray-level run emphasis; high gray-level run emphasis; short run low gray-level emphasis; short run high gray-level emphasis; long run low gray-level emphasis; long run high gray-level emphasis; |
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| WT | Wavelet transform. Feature names: mean; variance; energy |
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| WT-HCR | Wavelet transform combining GH, GLCM, and GLRLM. Feature names: refer to GH, GLCM, and GLRLM |
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| LOG-GH | Laplacian of Gaussian filter combining histogram. Feature names: refer to GH |
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| ACM-D | Angle co-occurrence matrix: direction gradient matrix based on the Sobel operator combining the co-occurrence matrix. Feature names: refer to GLCM |
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| ACM-M | Angle co-occurrence matrix: magnitude gradient matrix based on the Sobel operator combining the co-occurrence matrix. Feature names: refer to GLCM |
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| CTM | Combined texture method (all texture features including GH, GLCM, GLRLM, WT, WT-HCR, LOG-GH, ACM1, and ACM2) |
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| LD-WF | The method designed in this study. Feature names: refer GH, GLCM (five representative features are used: contrast; correlation; energy; homogeneity; and entropy), and GLRLM |
Figure 8Examples of wavelet decomposition. (a) Level-1 rbio2.8 wavelet decomposition of an ROI of R0. (b) Level-1 rbio2.8 wavelet decomposition of an ROI of R1.
Classification results.
| Method | TP | TN | FN | FP | Accuracy (%) | Sensitivity (%) | Specificity (%) | AUC |
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| GH | 15 | 31 | 19 | 21 | 53.49 | 44.12 | 59.62 | 0.4842 |
| GLCM | 21 | 27 | 13 | 25 | 55.81 | 61.76 | 51.92 | 0.6010 |
| GLRLM | 20 | 24 | 14 | 28 | 51.16 | 58.82 | 46.15 | 0.4938 |
| WT | 20 | 35 | 14 | 17 | 63.95 | 58.82 | 67.31 | 0.6711 |
| WT-HCR | 22 | 31 | 12 | 21 | 61.63 | 64.71 | 59.62 | 0.6309 |
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| ACM-D | 22 | 21 | 12 | 31 | 50.00 | 64.71 | 40.38 | 0.4531 |
| ACM-M | 21 | 30 | 13 | 22 | 59.30 | 61.76 | 57.69 | 0.6267 |
| CTM |
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| LD-WF |
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Figure 9ROC curves.
Mann–Whitney U-test results.
| Number | Feature name | Statistical name | Sub-band | Location | |
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| F1 | Run length nonuniformity | Run-length matrix | Horizontal | Top |
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| F2 | Energy | Co-occurrence matrix ( | Diagonal | Middle |
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| F3 | Energy | Co-occurrence matrix ( | Diagonal | Middle |
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| F4 | High gray-level run emphasis | Run-length matrix | Diagonal | Middle |
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| F5 | Short run low gray-level emphasis | Run-length matrix | Diagonal | Middle |
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| F6 | Short run high gray-level emphasis | Run-length matrix | Diagonal | Middle |
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| F7 | Standard deviation | Histogram | Diagonal | Bottom |
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| F8 | Smoothness | Histogram | Diagonal | Bottom |
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| F9 | Cubic moment | Histogram | Diagonal | Bottom |
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| F10 | Fourth moment | Histogram | Diagonal | Bottom |
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| F11 | Correlation | Co-occurrence matrix ( | Diagonal | Bottom |
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| F12 | Long run emphasis | Run-length matrix | Diagonal | Bottom |
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| F13 | Long run low gray-level emphasis | Run-length matrix | Diagonal | Bottom |
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| F14 | Long run high gray-level emphasis | Run-length matrix | Diagonal | Bottom |
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Results of right-tailed hypothesis tests.
| Feature name | |
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| F4: high gray-level run emphasis (HGRE), run-length matrix, diagonal sub-band image, middle slice |
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| F6: short run high gray-level emphasis (SRHGE), run-length matrix, diagonal sub-band image, middle slice |
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| F9: cubic moment, histogram, diagonal sub-band image, bottom slice |
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