Literature DB >> 32377037

Multigene CRISPR/Cas9 genome editing of hybrid proline rich proteins (HyPRPs) for sustainable multi-stress tolerance in crops: the review of a promising approach.

Banashree Saikia1,2, Sanjay Singh1, Johni Debbarma1,2, Natarajan Velmurugan2,3, Hariprasanna Dekaboruah1,2, Kallare P Arunkumar4, Channakeshavaiah Chikkaputtaiah1,2.   

Abstract

The recent global climate change has directly impacted major biotic and abiotic stress factors affecting crop productivity worldwide. Therefore, the need of the hour is to develop sustainable multiple stress tolerant crops through modern biotechnological approaches to cope with climate change. Hybrid proline rich proteins (HyPRPs) are the cell-wall structural proteins, which contain an N-terminal repetitive proline-rich domain and a C-terminal conserved eight-cysteine motif domain. HyPRPs are known to regulate multiple abiotic and biotic stress responses in plants. Recently, a few HyPRPs have been characterized as negative regulators of abiotic and biotic stress responses in different plants. Disruption of such negative regulators for desirable positive phenotypic traits has been made possible through the advent of advanced genome engineering tools. In the past few years, CRISPR/Cas9 has emerged as a novel breakthrough technology for crop improvement by target specific editing of known negative regulatory host genes. Here, we have described the mechanism of action and the role of known HyPRPs in regulating different biotic and abiotic stress responses in major crop plants. We have also discussed the importance of the CRISPR/Cas9 based genome editing system in targeting known negative regulatory HyPRPs for multi-stress crop tolerance using the tomato crop model. Application of genome editing to manipulate the HyPRPs of major crop plants holds promise in developing newer stress management methods in this rapidly changing climate and would lead in the future to sustain crop productivity. © Prof. H.S. Srivastava Foundation for Science and Society 2020.

Entities:  

Keywords:  8CM; CRISPR/Cas9; HyPRPs; Multi-stress tolerance; Multiplex-multigene; Sustainable

Year:  2020        PMID: 32377037      PMCID: PMC7196567          DOI: 10.1007/s12298-020-00782-6

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  108 in total

Review 1.  CRISPR-Cas adaptation: insights into the mechanism of action.

Authors:  Gil Amitai; Rotem Sorek
Journal:  Nat Rev Microbiol       Date:  2016-01-11       Impact factor: 60.633

2.  OsPRP3, a flower specific proline-rich protein of rice, determines extracellular matrix structure of floral organs and its overexpression confers cold-tolerance.

Authors:  Kodiveri Muthukalianan Gothandam; Easwaran Nalini; Sivashanmugam Karthikeyan; Jeong Sheop Shin
Journal:  Plant Mol Biol       Date:  2009-10-15       Impact factor: 4.076

3.  GhHyPRP4, a cotton gene encoding putative hybrid proline-rich protein, is preferentially expressed in leaves and involved in plant response to cold stress.

Authors:  Gengqing Huang; Siying Gong; Wenliang Xu; Peng Li; Dejing Zhang; Lixia Qin; Wen Li; Xuebao Li
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2011-06-02       Impact factor: 3.848

Review 4.  Genome engineering with zinc-finger nucleases.

Authors:  Dana Carroll
Journal:  Genetics       Date:  2011-08       Impact factor: 4.562

5.  A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.

Authors:  Xu Tang; Levi G Lowder; Tao Zhang; Aimee A Malzahn; Xuelian Zheng; Daniel F Voytas; Zhaohui Zhong; Yiyi Chen; Qiurong Ren; Qian Li; Elida R Kirkland; Yong Zhang; Yiping Qi
Journal:  Nat Plants       Date:  2017-06-19       Impact factor: 15.793

6.  Application of Cas12a and nCas9-activation-induced cytidine deaminase for genome editing and as a non-sexual strategy to generate homozygous/multiplex edited plants in the allotetraploid genome of tobacco.

Authors:  Chen-Tran Hsu; Yu-Jung Cheng; Yu-Hsua Yuan; Wei-Fon Hung; Qiao-Wei Cheng; Fu-Hui Wu; Lan-Ying Lee; Stanton B Gelvin; Choun-Sea Lin
Journal:  Plant Mol Biol       Date:  2019-08-10       Impact factor: 4.076

7.  Multiplex QTL editing of grain-related genes improves yield in elite rice varieties.

Authors:  Jianping Zhou; Xuhui Xin; Yao He; Hongqiao Chen; Qian Li; Xu Tang; Zhaohui Zhong; Kejun Deng; Xuelian Zheng; Sayed Abdul Akher; Guangze Cai; Yiping Qi; Yong Zhang
Journal:  Plant Cell Rep       Date:  2018-08-29       Impact factor: 4.570

8.  Physiological and comparative proteomic analysis reveals different drought responses in roots and leaves of drought-tolerant wild wheat (Triticum boeoticum).

Authors:  Hui Liu; Muhammad Abdul Rab Faisal Sultan; Xiang Li Liu; Jin Zhang; Fei Yu; Hui Xian Zhao
Journal:  PLoS One       Date:  2015-04-10       Impact factor: 3.240

9.  RNA virus interference via CRISPR/Cas13a system in plants.

Authors:  Rashid Aman; Zahir Ali; Haroon Butt; Ahmed Mahas; Fatimah Aljedaani; Muhammad Zuhaib Khan; Shouwei Ding; Magdy Mahfouz
Journal:  Genome Biol       Date:  2018-01-04       Impact factor: 13.583

10.  Engineered Cpf1 variants with altered PAM specificities.

Authors:  Linyi Gao; David B T Cox; Winston X Yan; John C Manteiga; Martin W Schneider; Takashi Yamano; Hiroshi Nishimasu; Osamu Nureki; Nicola Crosetto; Feng Zhang
Journal:  Nat Biotechnol       Date:  2017-06-05       Impact factor: 54.908

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  2 in total

Review 1.  Intriguing Role of Proline in Redox Potential Conferring High Temperature Stress Tolerance.

Authors:  P B Kavi Kishor; Prashanth Suravajhala; P Rathnagiri; Nese Sreenivasulu
Journal:  Front Plant Sci       Date:  2022-06-10       Impact factor: 6.627

2.  BSR-Seq analysis provides insights into the cold stress response of Actinidia arguta F1 populations.

Authors:  Miaomiao Lin; Shihang Sun; Jinbao Fang; Xiujuan Qi; Leiming Sun; Yunpeng Zhong; Yanxiang Sun; Gu Hong; Ran Wang; Yukuo Li
Journal:  BMC Genomics       Date:  2021-01-22       Impact factor: 3.969

  2 in total

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