| Literature DB >> 32375123 |
Tomás P Griffin1,2, Caroline M Joyce3, Sumaya Alkanderi4, Liam M Blake5, Derek T O'Keeffe1, Delia Bogdanet1, Md Nahidul Islam2,5, Michael C Dennedy1,6, John E Gillan7, John J Morrison8, Timothy O'Brien1,2, John A Sayer4,9,10, Marcia Bell1, Paula M O'Shea5.
Abstract
INTRODUCTION: Inactivating mutations in CYP24A1, encoding vitamin D-24-hydroxylase, can lead to an accumulation of active vitamin D metabolites and consequent hypercalcaemia. Patient (infantile and adult) presentation is varied and includes mild-severe hypercalcaemia, hypercalciuria, nephrocalcinosis and nephrolithiasis. This study aimed to characterize the clinical and biochemical phenotypes of a family with two CYP24A1 missense variants.Entities:
Keywords: CYP24A1 mutation; genetic mutation; hypercalcaemia; hypervitaminosis D; phenotype; vitamin D
Year: 2020 PMID: 32375123 PMCID: PMC7354719 DOI: 10.1530/EC-20-0150
Source DB: PubMed Journal: Endocr Connect ISSN: 2049-3614 Impact factor: 3.335
Demographics, clinical, biochemical and genetic analyses on first contact.
| Parameter | II.2a | RIb | II.2c | I.1 | I.2 | II.1 | II.3 | RId | III.1e | III.2e | III.3e |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Age (years) | 32 | - | 33 | 58 | 58 | 36 | 32 | - | 2 | 7 | 1 |
| Gender (F/M) | F | - | F | M | F | M | F | - | M | M | F |
| Mutation present A±B | A/B | - | A/B | A/A | B | A/B | A/B | - | A | A | A |
| Total Ca2+ (mmol/L) | 2.05–2.25 | 2.45 | 2.47 | 2.41 | 2.51 | n/a | 2.15–2.55 | 2.68 | 2.44 | 2.45 | |
| Adj. Ca2+ (mmol/L) | 2.10–2.30 | 2.41 | 2.42 | 2.37 | 2.46 | n/a | 2.18–2.55 | n/a | n/a | n/a | |
| Albumin (g/L) | 36 | 26–45 | 47 | 48 | 47 | 48 | n/a | 39–51 | 46 | 50 | 42 |
| Phosphate (mmol/L) | 1.04 | 0.87–1.48 | 0.93 | 1.37 | 1.2 | 1.1 | n/a | 0.87–1.45 | 1.61 | 1.46 | 1.81 |
| iPTH (ng/L) | 18–25 | 15.5 | 54.9 | 37.6 | 18 | n/a | 15–65 | 23.5 | 21.8 | 46.3 | |
| 25(OH)D (nmol/L) | 25–55 | 105 | 57 | 35 | n/a | 75–125 | 141 | 81 | 93 | ||
| 1,25(OH)2D (pmol/L) | 72–280 | 83 | 125 | 94 | n/a | 55–139 | n/a | n/a | n/a | ||
| 24,25(OH)2D (nmol/L) | n/a | - | 3.3 | n/a | n/a | 2.1 | n/a | 1.3–13.5 (13) | n/a | n/a | n/a |
| 25(OH)D:24,25(OH)2D ratio | n/a | - | n/a | n/a | n/a | 7–23 (13) | n/a | n/a | n/a | ||
| 1,25(OH)2D:24,25(OH)2D ratio | n/a | - | 25 | n/a | n/a | n/a | 11–62 | n/a | n/a | n/a | |
| FGF-23 (RU/mL) | n/a | - | 45 | n/a | <100 | n/a | n/a | n/a | |||
| Creatinine (µmol/L) | 35–71 | 82 | 102 | n/a | F: 49–90 | 28 | 42 | 24 | |||
| eGFR (mL/min/1.73 m2) | 63 | 60–120 | 63 | 68 | 72 | n/a | 60–120 | n/a | n/a | n/a | |
| ALP (U/L) | 51 | 25–126 | 35 | 72 | 55 | 68 | n/a | 35–104 | 367 | 235 | 263 |
| fUr. Ca2+:creatinine molar ratio | 0.25–0.75 | n/a | 0.21 | 0.21 | n/a | n/a | 0.25–0.75 | n/a | n/a | n/a | |
| Ur. Ca2+ (mmol/24h) | 0.3–6.9 | n/a | n/a | n/a | n/a | 2.5–7.5 | n/a | n/a | n/a |
A or B, heterozygous; A, p.(Arg439Cys); A/A, homozygous; A/B, compound heterozygous, a17/40 weeks of gestation; B, p.(Trp275Arg); bspecific for trimester 2 of pregnancy; cindicates results from sample collected 3 months postpartum; dnon-pregnant adult; eall values for P6, P7 and P8 are within age-defined RIs; F, female; fspot/random urine sample; I.1, father; I.2, mother; II.1, brother; II.2, proband; II.3, sister; III.1, nephew; III.2, nephew; III.3, proband’s daughter; M, male; n/a, not available; RI, reference interval.
Figure 125(OH)D and adj. Ca2+ trends post presentation in the (A) proband (II.2) and (B) brother (II.1).
Biochemical analyses and vitamin D metabolite profiling during follow-up: proband (II.2) and brother (II.1).
| Parameter | Proband (aII.2) | aII.1 | Reference interval | |||||
|---|---|---|---|---|---|---|---|---|
| F | M | |||||||
| Month/year | b05/16 | 04/17 | 06/17 | 11/18 | 05/19 | 05/16 | 07/17 | - |
| Total Ca2+ (mmol/L) | 2.45 | 2.50 | 2.53 | 2.54 | 2.51 | 2.15–2.55 | ||
| Adj. Ca2+ (mmol/L) | 2.41 | 2.51 | 2.49 | 2.46 | 2.17–2.51 | |||
| Albumin (g/L) | 47 | 44 | 47 | 47 | 46 | 48 | 48 | 39–51 |
| Phosphate (mmol/L) | 0.93 | 1.10 | 1.19 | 1.21 | 1.10 | 1.16 | 0.87–1.45 | |
| iPTH (ng/L) | 15.5 | 18.0 | 15–65 | |||||
| 25(OH)D (nmol/L) | 105 | 94 | 104 | 106 | 89 | 75–125 | ||
| 1,25(OH)2D (pmol/L) | 83 | 124 | 135 | 101 | 124 | 55–139 | ||
| 24,25(OH)2D (nmol/L) | 3.3 | 1.3 | 1.7 | 2.5 | 1.3 | 2.1 | 2.6 | 1.3–13.5 |
| 25(OH)D:24,25(OH)2D ratio | 7–23 | |||||||
| 1,25(OH)2D:24,25(OH)2D ratio | 25 | 40 | 11–62 | |||||
| FGF-23 (RU/mL) | n/a | n/a | n/a | <100 | ||||
| Creatinine (µmol/L) | 90 | 75 | 76 | 72 | 87 | 102 | 108 | F: 49–90M: 60–110 |
| eGFR (mL/min/1.73 m2) | 63 | >90 | 88 | >90 | 74 | 72 | 75 | 60–120 |
| ALP (U/L) | 51 | 46 | 48 | 37 | 43 | 68 | 72 | 35–104 |
| cUr. Ca2+:creatinine molar ratio | n/a | n/a | n/a | n/a | n/a | 0.25–0.75 | ||
| Ur. Ca2+ (mmol/24h) | n/a | n/a | n/a | n/a | n/a | 2.5–7.5 | ||
compound heterozygous (A/B): A, p.(Arg439Cys); B, p.(Trp275Arg); eGFR was calculated using the Chronic Kidney Disease-Epidemiology Collaboration (CKD-EPI) formula; F, female; M, male; b3 months post-partum (not breastfeeding); n/a, not available; cspot/random urine sample.
Figure 2Evidence for CYP24A1 c.823T>C; p.(Trp275Arg) variant classification. The ACMG utilises a series of evidence criteria in support of a pathogenic (P) or benign (B) classification. The different types of evidence (functional, genetic, population, in-silico etc) are stratified according to the level of evidence (supporting, moderate, strong or very strong) and a pathogenicity classification (pathogenic, likely pathogenic, variant of unknown significance (VUS), likely benign or benign) assigned according to a set of ‘combined criteria’ provided in the guidelines (19). PM, moderate evidence of pathogenicity; PP, supporting evidence of pathogenicity. The level of evidence is then categorised numerically: PM1, located in functional domain; PM2, absent from controls; PM3, recessive disorder and present in trans with a pathogenic mutation; PP4, functional biochemical evidence; PP3, in silico evidence supporting pathogenicity.
Figure 3Family pedigree showing inheritance of CYP24A1 mutations. Arrow indicates the position of the proband in the family. I.1, father; I.2, mother; II.1, brother; II.2, proband; II.3, sister; III.1, nephew; III.2, nephew; III.3, proband’s daughter.
Clinical, biochemical and genetic findings in eight reported cases of maternal hypercalcaemia due to CYP24A1 pathogenic variants.
| Case Report | Molin 2015 (16) | Dinour 2015 (20) | Shah 2015 (11) | Woods 2016 (23) | Hedberg 2019 (24) | McBride 2019 (21, 22) | MacDonald 2019 (25) | |
|---|---|---|---|---|---|---|---|---|
| Genotype | Compound heterozygous | Homozygous | Compound heterozygous | Homozygous | Compound heterozygous | Homozygous | Compound heterozygous | Homozygous |
| Mutation | p.E322A/p.L409S | p.E143del | p.E143del/p.R396W | p.S334Vf*9 | p.R396W/p.L148P | p.R396W | p.E143del/p.K351Nfs*21 | p.E143del |
| Age/years | NS | 35 | 28 | 20 | 23 | 21 | 27 | Mid 20s |
| Gestation week/PP | 32 | 32 | 14 | 1–5 days PP | 38 | 15 | 5–7 days PP | 13 |
| Ethnicity | NS | Moroccan | NS | Mexican | Swedish | Caucasian | NS | |
| PMHx | NS | Renal stones | Renal stones | Hypertension | Renal stones | Renal stones | Renal calculus | |
| Medullary nephrocalcinosis | NS | Yes | Yes | NS | Yes | Yes | Yes | NS |
| Symptoms | NS | Weakness | Fatigue | Altered mental status and acute pancreatitis | Epigastric pain | PP | Symptomatic hypercalcaemia | Symptomatic hypercalcaemia |
| Calcium (mmol/L) | 3.3 | 3.00 to 3.68 | 2.38 to 3.05 | 3.50 | 4.29 | 2.87 | 3.63 | 2.90 |
| PTH (ng/L) | Suppressed | <3 | <3 | <6 | 5 | <10 | 5.6 | 6.6 |
| 25(OH)D (nmol/L) | NS | 70 | 159–185a | 113–133 | 98 | 267 | 77 | 116 |
| 1,25(OH)2D (pmol/L) | 441 | 214 | 422–509 | 396–468 | 187 | 386 | 250 | 380 |
| 24,25(OH)2D (nmol/L) | NS | NS | 1.85a | Not detected | NS | NS | NS | 0.1 |
| 25(OH)D: 24,25(OH)2D ratio | NS | NS | 86a | NS | NS | NS | NS | 594 |
| Ur calcium:creatinine ratio | NS | NS | NS | NS | NS | NS | 0.22 | 2.09 |
| 24-h Ur calcium (mmol/day) | NS | 10.53 | 9.43 | 6.91 | 15.5 | 5.7 | NS | NS |
| Vitamin D supplements | NS | 750 IU/day | NS | Yes | NS | NS | 250 IU/day | 50,000 IU/month |
| Medication/over the counter | NS | Calcium bicarbonate | Prenatal vitamin | Amlodipine | Citalopram | NS | NS | NS |
Values used to derive 25(OH)D to 24,25(OH)2D ratio.
HTN: hypertension; NS: not stated; PP: post-partum.