| Literature DB >> 32362928 |
Libia Sanz1, Alicia Pérez1, Sarai Quesada-Bernat1, Rafaela Diniz-Sousa2,3,4, Leonardo A Calderón2,3,5,6, Andreimar M Soares2,3,4,5,7, Juan J Calvete1, Cleópatra A S Caldeira2,3,5.
Abstract
BACKGROUND: The Brazil's lancehead, Bothrops brazili, is a poorly studied pit viper distributed in lowlands of the equatorial rainforests of southern Colombia, northeastern Peru, eastern Ecuador, southern and southeastern Venezuela, Guyana, Suriname, French Guiana, Brazil, and northern Bolivia. Few studies have been reported on toxins isolated from venom of Ecuadorian and Brazilian B. brazili. The aim of the present study was to elucidate the qualitative and quantitative protein composition of B. brazili venom from Pará (Brazil), and to carry out a comparative antivenomics assessment of the immunoreactivity of the Brazilian antibothropic pentavalent antivenom [soro antibotrópico (SAB) in Portuguese] against the venoms of B. brazili and reference species, B. jararaca.Entities:
Keywords: Bothrops brazili; Brazilian antibothropic polyvalent antivenom; Snake venom; Third-generation antivenomics; Venomics
Year: 2020 PMID: 32362928 PMCID: PMC7179968 DOI: 10.1590/1678-9199-JVATITD-2019-0103
Source DB: PubMed Journal: J Venom Anim Toxins Incl Trop Dis ISSN: 1678-9180
Figure 1.Venomics analysis of Bothrops brazili. (A) Reverse-phase chromatographic separation of the venom proteins of Bothrops brazili from Pará, Brazil. For venomics analysis the chromatographic fractions were collected manually and analyzed by SDS-PAGE (inset) under reduced conditions. Protein bands were excised, in-gel digested with trypsin, the resulting proteolytic peptides fragmented through LC-nESI-MS/MS, and the parent proteins identified by database searching and de novo sequencing followed by BLAST analysis (Additional file 1). The photograph of Bothrops brazili was kindly provided by Tiago Santana. (B) Pie chart displaying the estimated number and their relative occurrence (in percentage of total venom proteins) of toxins from the different protein families found in the venom proteome of Bothrops brazili (panel A). SVMPi: tripeptide inhibitors of snake venom metalloproteinase (SVMP); NGF: nerve growth factor; PLA2: phospholipase A2; SVSP: snake venom serine protease; CRISP: cysteine-rich secretory protein; PI- and PIII-SVMP: SVMPs of class PI and PIII, respectively; LAO: L-amino acid oxidase; 5'NT: 5'-nucleotidase; PDE: phosphodiesterase; PLB: phospholipase B; CTL: C-type lectin-like.
Figure 2.Two-dimensional gel electrophoresis of the Brazil’s lancehead venom proteome. Two-dimensional electrophoretic separations (IEF/SDS-PAGE) of the venom proteins of Bothrops brazili from Pará. For the first (IEF) dimension, the venom proteins were focused to their isoelectric points under non-reducing (NR) conditions. For the second (SDS-PAGE) dimension, the IPGs were equilibrated at room temperature in equilibration buffer (A) without (NR) or (B) with (RED) 40 mM of the disulfide bond reducing agent, DTT. (A) Spots submitted to in-gel trypsin digestion and bottom-up peptide-centric MS/MS analysis are numbered, whereas identified proteins are listed in Additional file 2. (B) An overview of the distribution of, and occurrence of proteoforms within, the different toxin classes identified in the venom of the Brazil’s lancehead.
Figure 3.Comparative immunorecognition ability of the Brazilian SAB antivenom towards B. brazili and B. jararaca venom toxins. (A) Third-generation antivenomic analyses of B. brazili and (B) B. jararaca venom with the pentabothropic antivenom (soro antibotrópico, SAB) produced at Butantan Institute. Reverse-phase chromatographic analysis of whole venom (panels a) and of the non-retained and the immunoretained fractions recovered from affinity column [9 mg immobilized SAB antivenom F(ab’)2 molecules] incubated with increasing amounts (300-3600 µg) of venom from (A) B. brazili (Pará, Brazil) and (B) B. jararaca (SE population) are displayed in panels b through i. Panels j-l show reverse-phase HPLC separations of the retained and non-retained venom fractions on mock matrix and naïve equine IgG affinity columns, respectively.
Concentration-dependent immunoretained (RET) Bothrops brazili (Bbr) venom proteins by SAB antivenom affinity column. Maximal binding for each RP-HPLC fraction is highlighted in bold face
|
| ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RP-HPLC fraction | 100 | 300 | 600 | 900 | 1200 | 2400 | 3600 | Extrapolation | Toxin class | |
|
| µg TOTAL | 10.09 | 30.27 | 60.55 | 90.82 | 121.09 | 242.18 | 363.28 |
| |
| µg RET | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | |||
|
| µg TOTAL | 1.52 | 4.56 | 9.13 | 13.69 | 18.25 | 36.50 | 54.76 | 76.00 |
|
| µg RET | 1.52 | 3.18 | 6.34 | 8.87 | 12.03 | 19.56 | 21.69 |
| ||
|
| µg TOTAL | 0.31 | 0.93 | 1.87 | 2.80 | 3.73 | 7.46 | 11.20 |
| |
| µg RET | 0.31 | 0.93 | 1.87 | 2.80 |
| 2.98 | 2.98 | |||
|
| µg TOTAL | 7.93 | 23.80 | 47.60 | 71.40 | 95.20 | 190.39 | 285.59 | 396.50 |
|
| µg RET | 7.93 | 19.22 | 21.09 | 16.71 | 20.18 | 21.43 | 22.80 |
| ||
|
| µg TOTAL | 6.29 | 18.87 | 37.73 | 56.60 | 75.47 | 150.94 | 226.40 |
| |
| µg RET | 6.29 | 17.01 | 21.99 | 21.90 | 21.06 |
| 22.45 | |||
|
| µg TOTAL | 1.97 | 5.90 | 11.80 | 17.69 | 23.59 | 47.18 | 70.78 |
| |
| µg RET | 1.97 | 5.05 | 6.15 | 6.11 | 6.05 |
| 6.38 | |||
|
| µg TOTAL | 0.83 | 2.50 | 5.00 | 7.51 | 10.01 | 20.02 | 30.02 |
| |
| µg RET | 0.83 | 2.30 | 3.37 | 3.84 |
| 3.90 | 3.78 | |||
|
| µg TOTAL | 1.61 | 4.82 | 9.63 | 14.45 | 19.26 | 38.52 | 57.78 |
| |
| µg RET | 1.61 | 4.46 | 6.35 |
| 6.62 | 6.16 | 6.03 | |||
|
| µg TOTAL | 0.21 | 0.62 | 1.24 | 1.85 | 2.47 | 4.94 | 7.42 | 10.50 |
|
| µg RET | 0.21 | 0.62 | 1.24 | 1.85 | 2.47 | 2.94 | 3.06 |
| ||
|
| µg TOTAL | 0.26 | 0.77 | 1.54 | 2.31 |
| 6.17 | 9.25 |
| |
| µg RET | 0.26 | 0.77 | 1.54 | 2.31 |
| 2.68 | 2.34 | |||
|
| µg TOTAL | 1.69 | 5.08 | 10.16 | 15.24 | 20.32 | 40.63 | 60.95 | 84.50 |
|
| µg RET | 1.69 | 5.08 | 10.16 | 15.24 | 20.32 | 23.73 | 25.24 |
| ||
|
| µg TOTAL | 2.61 | 7.82 | 15.64 | 23.45 | 31.27 | 62.54 | 93.82 | 130.50 |
|
| µg RET | 2.61 | 7.25 | 11.81 | 15.04 | 17.78 | 20.35 | 22.73 |
| ||
|
| µg TOTAL | 3.70 | 11.11 | 22.22 | 33.33 | 44.44 | 88.87 | 133.31 |
| |
| µg RET | 3.70 | 8.48 | 19.97 |
| 25.08 | 20.47 | 18.21 | |||
|
| µg TOTAL | 15.63 | 46.88 | 93.77 | 140.65 | 187.54 | 375.07 | 562.61 |
| |
| µg RET | 15.63 | 45.42 |
| 42.40 | 41.17 | 43.65 | 41.43 | |||
|
| µg TOTAL | 0.28 | 0.83 | 1.67 | 2.50 | 3.34 | 6.67 | 10.01 |
| |
| µg RET | 0.28 | 0.83 | 1.67 | 2.50 |
| 3.32 | 3.31 | |||
|
| µg TOTAL | 1.83 | 5.48 | 10.96 | 16.44 | 21.92 | 43.85 | 65.77 | 91.50 |
|
| µg RET | 1.83 | 5.48 | 10.96 | 16.44 | 21.92 | 22.97 | 33.65 |
| ||
|
| µg TOTAL | 2.21 | 6.62 | 13.24 | 19.85 | 26.47 | 52.94 | 79.42 | 110.50 |
|
| µg RET | 2.21 | 6.62 | 13.24 | 19.85 | 26.47 | 31.65 | 34.00 |
| ||
|
| µg TOTAL | 14.60 | 43.79 | 87.59 | 131.38 | 175.18 | 350.35 | 525.53 | 730.00 |
|
| µg RET | 14.17 | 43.24 | 86.01 | 130.62 | 164.29 | 173.27 | 188.76 |
| ||
|
| µg TOTAL | 11.75 | 35.24 | 70.49 | 105.73 | 140.98 | 281.95 | 422.93 | 587.50 |
|
| µg RET | 10.81 | 33.45 | 66.70 | 95.65 | 118.52 | 177.47 | 202.71 |
| ||
|
| µg TOTAL | 14.70 | 44.10 | 88.19 | 132.29 | 176.39 | 352.78 | 529.16 | 735.00 |
|
| µg RET | 13.64 | 42.81 | 85.65 | 128.28 | 163.15 | 310.34 | 318.67 |
| ||
Concentration-dependent immunoretained (RET) Bothrops jararaca (SE) (Bj) venom proteins by SAB antivenom affinity column. Maximal binding for each RP-HPLC fraction is highlighted in bold face
|
| ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| RP-HPLC fraction | 100 | 300 | 600 | 900 | 1200 | 2400 | 3600 | Extrapolation | Toxin class | |
|
| µg TOTAL | 8.62 | 25.86 | 51.71 | 77.57 | 103.43 | 206.86 | 310.28 | 431.00 |
|
| µg RET | 0.45 | 2.50 | 5.77 | 9.18 | 9.17 | 9.94 | 10.96 |
| ||
|
| µg TOTAL | 5.03 | 15.09 | 30.19 | 45.28 | 60.37 | 120.74 | 181.12 | 250.15 |
|
| µg RET | 0.81 | 6.00 | 7.59 | 9.70 | 11.06 | 15.31 | 19.50 |
| ||
|
| µg TOTAL | 2.01 | 6.04 | 12.07 | 18.11 | 24.14 | 48.29 | 72.43 |
| |
| µg RET | 0.14 | 0.20 | 0.29 | 0.38 | 0.48 |
| 0.51 | |||
|
| µg TOTAL | 0.70 | 2.11 | 4.22 | 6.34 | 8.45 | 16.90 | 25.34 | 35.00 |
|
| µg RET | 0.70 | 2.11 | 4.22 | 6.34 | 7.23 | 7.45 | 8.31 |
| ||
|
| µg TOTAL | 2.09 | 6.26 | 12.53 | 18.79 | 25.06 | 50.11 | 75.17 | 104.50 |
|
| µg RET | 2.09 | 6.26 | 9.39 | 9.43 | 9.57 | 10.79 | 16.12 |
| ||
|
| µg TOTAL | 1.48 | 4.44 | 8.87 | 13.31 | 17.75 | 35.50 | 53.24 | 74.00 |
|
| µg RET | 1.48 | 4.44 | 8.87 | 12.53 | 16.78 | 30.59 | 34.08 |
| ||
|
| µg TOTAL | 12.01 | 36.02 | 72.04 | 108.05 | 144.07 | 288.14 | 432.22 | 600.51 |
|
| µg RET | 12.01 | 36.02 | 72.04 | 105.20 | 128.17 | 143.57 | 156.93 |
| ||
|
| µg TOTAL | 4.03 | 12.10 | 24.19 | 36.29 | 48.38 | 96.77 | 145.15 | 201.50 |
|
| µg RET | 4.03 | 12.10 | 24.19 | 36.29 | 48.38 | 83.84 | 105.48 |
| ||
|
| µg TOTAL | 19.20 | 57.61 | 115.22 | 172.84 | 230.45 | 460.90 | 691.34 | 960.01 |
|
| µg RET | 17.92 | 56.07 | 113.23 | 167.29 | 213.21 | 278.24 | 338.59 |
| ||
|
| µg TOTAL | 44.83 | 134.48 | 268.96 | 403.43 | 537.91 | 1075.82 | 1613.74 | 2191.51 |
|
| µg RET | 43.51 | 132.72 | 260.99 | 351.64 | 376.24 | 529.24 | 629.53 |
| ||