Literature DB >> 32358005

A Fog-Irrigated Soil Substrate System Unifies and Optimizes Cyanobacterial Biocrust Inoculum Production.

Corey Nelson1,2, Ana Giraldo-Silva1,2, Ferran Garcia-Pichel3,2.   

Abstract

Biological soil crusts (biocrusts) are globally important microbial communities inhabiting the top layer of soils. They provide multiple services to dryland ecosystems but are particularly vulnerable to anthropogenic disturbance from which they naturally recover only slowly. Assisted inoculation with cyanobacteria is held as a promising approach to promote biocrust regeneration. Two different methodologies have been developed for this purpose: mass cultivation of biocrust pioneer species (such as the cyanobacteria Microcoleus spp.) on cellulose supports, and polymicrobial cultivation of biocrusts in soils within greenhouse settings. Here, we aimed to test a novel method to grow cyanobacterial biocrust inoculum based on fog irrigation of soil substrates (FISS) that can be used with either culture-based or mixed-community approaches. We found that the FISS system presents clear advantages over previous inoculum production methodologies; overall, FISS eliminates the need for specialized facilities and decreases user effort. Specifically, there were increased microbial yields and simplification of design compared to those of the culture-based and mixed-community approaches, respectively. Its testing also allows us to make recommendations on underexplored aspects of biocrust restoration: (i) field inoculation levels should be equal to or greater than the biomass found in the substrate and (ii) practices regarding evaluation of cyanobacterial biomass should, under certain circumstances, include proxies additional to chlorophyll a IMPORTANCE Biocrust inoculum production for use in dryland rehabilitation is a powerful tool in combating the degradation of dryland ecosystems. However, the facilities and effort required to produce high-quality inoculum are often a barrier to effective large-scale implementation by land managers. By unifying and optimizing the two foremost methods for cyanobacterial biocrust inoculum production, our work improves on the ease and cost with which biocrust restoration technology can be translated to practical widespread implementation.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  biocrusts; biological soil crusts; cultivation; cyanobacteria; degraded dryland soils; soil restoration

Mesh:

Year:  2020        PMID: 32358005      PMCID: PMC7301847          DOI: 10.1128/AEM.00624-20

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  27 in total

1.  Phylogenetic and morphological diversity of cyanobacteria in soil desert crusts from the Colorado plateau.

Authors:  F Garcia-Pichel; A López-Cortés; U Nübel
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; Catherine A Lozupone; Peter J Turnbaugh; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-03       Impact factor: 11.205

3.  The community and phylogenetic diversity of biological soil crusts in the Colorado Plateau studied by molecular fingerprinting and intensive cultivation.

Authors:  Sathyanarayana Reddy Gundlapally; Ferran Garcia-Pichel
Journal:  Microb Ecol       Date:  2006-05-12       Impact factor: 4.552

Review 4.  Atmospheric movement of microorganisms in clouds of desert dust and implications for human health.

Authors:  Dale W Griffin
Journal:  Clin Microbiol Rev       Date:  2007-07       Impact factor: 26.132

5.  Effects of light and temperature on open cultivation of desert cyanobacterium Microcoleus vaginatus.

Authors:  Shubin Lan; Li Wu; Delu Zhang; Chunxiang Hu
Journal:  Bioresour Technol       Date:  2015-02-07       Impact factor: 9.642

6.  Exposure to predicted precipitation patterns decreases population size and alters community structure of cyanobacteria in biological soil crusts from the Chihuahuan Desert.

Authors:  Vanessa M C Fernandes; Náthali Maria Machado de Lima; Daniel Roush; Jennifer Rudgers; Scott L Collins; Ferran Garcia-Pichel
Journal:  Environ Microbiol       Date:  2017-12-04       Impact factor: 5.491

7.  Watering, fertilization, and slurry inoculation promote recovery of biological crust function in degraded soils.

Authors:  Fernando T Maestre; Noelia Martín; Beatriz Díez; Rosario López-Poma; Fernando Santos; Ignacio Luque; Jordi Cortina
Journal:  Microb Ecol       Date:  2006-05-19       Impact factor: 4.552

8.  QIIME allows analysis of high-throughput community sequencing data.

Authors:  J Gregory Caporaso; Justin Kuczynski; Jesse Stombaugh; Kyle Bittinger; Frederic D Bushman; Elizabeth K Costello; Noah Fierer; Antonio Gonzalez Peña; Julia K Goodrich; Jeffrey I Gordon; Gavin A Huttley; Scott T Kelley; Dan Knights; Jeremy E Koenig; Ruth E Ley; Catherine A Lozupone; Daniel McDonald; Brian D Muegge; Meg Pirrung; Jens Reeder; Joel R Sevinsky; Peter J Turnbaugh; William A Walters; Jeremy Widmann; Tanya Yatsunenko; Jesse Zaneveld; Rob Knight
Journal:  Nat Methods       Date:  2010-04-11       Impact factor: 28.547

9.  Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.

Authors:  Ivica Letunic; Peer Bork
Journal:  Nucleic Acids Res       Date:  2016-04-19       Impact factor: 16.971

10.  Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust.

Authors:  Lara Rajeev; Ulisses Nunes da Rocha; Niels Klitgord; Eric G Luning; Julian Fortney; Seth D Axen; Patrick M Shih; Nicholas J Bouskill; Benjamin P Bowen; Cheryl A Kerfeld; Ferran Garcia-Pichel; Eoin L Brodie; Trent R Northen; Aindrila Mukhopadhyay
Journal:  ISME J       Date:  2013-06-06       Impact factor: 10.302

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  1 in total

1.  Beneficial Cyanosphere Heterotrophs Accelerate Establishment of Cyanobacterial Biocrust.

Authors:  Corey Nelson; Ferran Garcia-Pichel
Journal:  Appl Environ Microbiol       Date:  2021-08-11       Impact factor: 4.792

  1 in total

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