Literature DB >> 32347706

Structural Characterization of Individual α-Synuclein Oligomers Formed at Different Stages of Protein Aggregation by Atomic Force Microscopy-Infrared Spectroscopy.

Lei Zhou1, Dmitry Kurouski1,2.   

Abstract

Aberrant α-synuclein aggregation is strongly associated with the onset and development of Parkinson's disease (PD). Therefore, characterizing the structure of toxic intermediate oligomers plays an essential role in better understanding their neurotoxicity. Using atomic force microscopy-infrared spectroscopy (AFM-IR), we were able to reveal the structure of α-synuclein oligomers present at different stages of protein aggregation and establish a relationship between morphology and structure on the single oligomer level. We were also able to probe the secondary structure evolution of individual oligomers. Moreover, the IR spectra of individual oligomers suggest structural rearrangement that is necessary for oligomers with an antiparallel β-sheet to propagate into fibrils that have a parallel-β-sheet secondary structure. Detailed investigation of structural organization of α-synuclein oligomers reported in this study is critically important to understand the toxicity of these protein species. We also anticipate that this work will help developing approaches for oligomer detection and consequently presymptomatic diagnostic of PD.

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Year:  2020        PMID: 32347706     DOI: 10.1021/acs.analchem.0c00593

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  16 in total

1.  Structurally Distinct Polymorphs of Tau Aggregates Revealed by Nanoscale Infrared Spectroscopy.

Authors:  Siddhartha Banerjee; Ayanjeet Ghosh
Journal:  J Phys Chem Lett       Date:  2021-11-08       Impact factor: 6.475

2.  Inhibition of alpha-synuclein aggregation by AM17, a synthetic resveratrol derivative.

Authors:  Edward Chau; Hyunjoo Kim; Jineun Shin; Alberto Martinez; Jin Ryoun Kim
Journal:  Biochem Biophys Res Commun       Date:  2021-08-20       Impact factor: 3.322

3.  Characterization of Substrates and Surface-Enhancement in Atomic Force Microscopy Infrared Analysis of Amyloid Aggregates.

Authors:  Stanislav Rizevsky; Kiryl Zhaliazka; Tianyi Dou; Mikhail Matveyenka; Dmitry Kurouski
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2022-02-17       Impact factor: 4.177

4.  Unsaturation in the Fatty Acids of Phospholipids Drastically Alters the Structure and Toxicity of Insulin Aggregates Grown in Their Presence.

Authors:  Mikhail Matveyenka; Stanislav Rizevsky; Dmitry Kurouski
Journal:  J Phys Chem Lett       Date:  2022-05-17       Impact factor: 6.888

5.  Nanoscale Structural Analysis of a Lipid-Driven Aggregation of Insulin.

Authors:  Stanislav Rizevsky; Mikhail Matveyenka; Dmitry Kurouski
Journal:  J Phys Chem Lett       Date:  2022-03-10       Impact factor: 6.888

6.  The amyloid concentric β-barrel hypothesis: Models of amyloid beta 42 oligomers and annular protofibrils.

Authors:  Stewart R Durell; Rakez Kayed; H Robert Guy
Journal:  Proteins       Date:  2022-01-25

Review 7.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

8.  Visualizing and trapping transient oligomers in amyloid assembly pathways.

Authors:  Emma E Cawood; Theodoros K Karamanos; Andrew J Wilson; Sheena E Radford
Journal:  Biophys Chem       Date:  2020-11-10       Impact factor: 2.352

9.  The amyloid concentric β-barrel hypothesis: Models of synuclein oligomers, annular protofibrils, lipoproteins, and transmembrane channels.

Authors:  Stewart R Durell; H Robert Guy
Journal:  Proteins       Date:  2021-10-11

10.  The structural heterogeneity of α-synuclein is governed by several distinct subpopulations with interconversion times slower than milliseconds.

Authors:  Jiaxing Chen; Sofia Zaer; Paz Drori; Joanna Zamel; Khalil Joron; Nir Kalisman; Eitan Lerner; Nikolay V Dokholyan
Journal:  Structure       Date:  2021-05-19       Impact factor: 5.871

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