Literature DB >> 32342338

The functional study of human proteins using humanized yeast.

Seho Kim1, Juhee Park1, Taekyung Kim2, Jung-Shin Lee3.   

Abstract

The functional and optimal expression of genes is crucial for survival of all living organisms. Numerous experiments and efforts have been performed to reveal the mechanisms required for the functional and optimal expression of human genes. The yeast Saccharomyces cerevisiae has evolved independently of humans for billions of years. Nevertheless, S. cerevisiae has many conserved genes and expression mechanisms that are similar to those in humans. Yeast is the most commonly used model organism for studying the function and expression mechanisms of human genes because it has a relatively simple genome structure, which is easy to manipulate. Many previous studies have focused on understanding the functions and mechanisms of human proteins using orthologous genes and biological systems of yeast. In this review, we mainly introduce two recent studies that replaced human genes and nucleosomes with those of yeast. Here, we suggest that, although yeast is a relatively small eukaryotic cell, its humanization is useful for the direct study of human proteins. In addition, yeast can be used as a model organism in a broader range of studies, including drug screening.

Entities:  

Keywords:  Saccharomyces cerevisiae; budding yeast; functional study of proteins; human proteins; humanization of yeast

Year:  2020        PMID: 32342338     DOI: 10.1007/s12275-020-0136-y

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  41 in total

1.  Orthology, paralogy and proposed classification for paralog subtypes.

Authors:  Erik L L Sonnhammer; Eugene V Koonin
Journal:  Trends Genet       Date:  2002-12       Impact factor: 11.639

2.  New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning.

Authors:  P T Lowary; J Widom
Journal:  J Mol Biol       Date:  1998-02-13       Impact factor: 5.469

3.  Functional homology of mammalian and yeast RAS genes.

Authors:  T Kataoka; S Powers; S Cameron; O Fasano; M Goldfarb; J Broach; M Wigler
Journal:  Cell       Date:  1985-01       Impact factor: 41.582

4.  A synthetic suicide riboswitch for the high-throughput screening of metabolite production in Saccharomyces cerevisiae.

Authors:  Sang-Woo Lee; Min-Kyu Oh
Journal:  Metab Eng       Date:  2015-01-14       Impact factor: 9.783

5.  Bovine coupling factor 6, with just 14.5% shared identity, replaces subunit h in the yeast ATP synthase.

Authors:  J Velours; J Vaillier; P Paumard; V Soubannier; J Lai-Zhang; D M Mueller
Journal:  J Biol Chem       Date:  2000-11-16       Impact factor: 5.157

6.  Using yeast to place human genes in functional categories.

Authors:  Nianshu Zhang; Michael Osborn; Paul Gitsham; Kuangyu Yen; J Ross Miller; Stephen G Oliver
Journal:  Gene       Date:  2003-01-16       Impact factor: 3.688

Review 7.  Functional and evolutionary implications of gene orthology.

Authors:  Toni Gabaldón; Eugene V Koonin
Journal:  Nat Rev Genet       Date:  2013-04-04       Impact factor: 53.242

Review 8.  Gene module level analysis: identification to networks and dynamics.

Authors:  Xuewei Wang; Ertugrul Dalkic; Ming Wu; Christina Chan
Journal:  Curr Opin Biotechnol       Date:  2008-09-03       Impact factor: 9.740

Review 9.  Efforts to make and apply humanized yeast.

Authors:  Jon M Laurent; Jonathan H Young; Aashiq H Kachroo; Edward M Marcotte
Journal:  Brief Funct Genomics       Date:  2015-10-13       Impact factor: 4.241

10.  Divergent Residues Within Histone H3 Dictate a Unique Chromatin Structure in Saccharomyces cerevisiae.

Authors:  Kristina L McBurney; Andrew Leung; Jennifer K Choi; Benjamin J E Martin; Nicholas A T Irwin; Till Bartke; Christopher J Nelson; LeAnn J Howe
Journal:  Genetics       Date:  2015-11-03       Impact factor: 4.562

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  1 in total

Review 1.  Effects of Non-Thermal Plasma on Yeast Saccharomyces cerevisiae.

Authors:  Peter Polčic; Zdenko Machala
Journal:  Int J Mol Sci       Date:  2021-02-24       Impact factor: 5.923

  1 in total

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