Literature DB >> 32341846

Phase unwrapping based on a residual en-decoder network for phase images in Fourier domain Doppler optical coherence tomography.

Chuanchao Wu1, Zhengyu Qiao1, Nan Zhang1, Xiaochen Li1, Jingfan Fan1, Hong Song2, Danni Ai1, Jian Yang1, Yong Huang1.   

Abstract

To solve the phase unwrapping problem for phase images in Fourier domain Doppler optical coherence tomography (DOCT), we propose a deep learning-based residual en-decoder network (REDN) method. In our approach, we reformulate the definition for obtaining the true phase as obtaining an integer multiple of 2π at each pixel by semantic segmentation. The proposed REDN architecture can provide recognition performance with pixel-level accuracy. To address the lack of phase images that are noise and wrapping free from DOCT systems for training, we used simulated images synthesized with DOCT phase image background noise features. An evaluation study on simulated images, DOCT phase images of phantom milk flowing in a plastic tube and a mouse artery, was performed. Meanwhile, a comparison study with recently proposed deep learning-based DeepLabV3+ and PhaseNet methods for signal phase unwrapping and traditional modified networking programming (MNP) method was also performed. Both visual inspection and quantitative metrical evaluation based on accuracy, specificity, sensitivity, root-mean-square-error, total-variation, and processing time demonstrate the robustness, effectiveness and superiority of our method. The proposed REDN method will benefit accurate and fast DOCT phase image-based diagnosis and evaluation when the detected phase is wrapped and will enrich the deep learning-based image processing platform for DOCT images.
© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2020        PMID: 32341846      PMCID: PMC7173896          DOI: 10.1364/BOE.386101

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  27 in total

1.  Random walks for image segmentation.

Authors:  Leo Grady
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-11       Impact factor: 6.226

2.  ELHnet: a convolutional neural network for classifying cochlear endolymphatic hydrops imaged with optical coherence tomography.

Authors:  George S Liu; Michael H Zhu; Jinkyung Kim; Patrick Raphael; Brian E Applegate; John S Oghalai
Journal:  Biomed Opt Express       Date:  2017-09-20       Impact factor: 3.732

3.  Segmentation of mouse skin layers in optical coherence tomography image data using deep convolutional neural networks.

Authors:  Timo Kepp; Christine Droigk; Malte Casper; Michael Evers; Gereon Hüttmann; Nunciada Salma; Dieter Manstein; Mattias P Heinrich; Heinz Handels
Journal:  Biomed Opt Express       Date:  2019-06-21       Impact factor: 3.732

4.  CorneaNet: fast segmentation of cornea OCT scans of healthy and keratoconic eyes using deep learning.

Authors:  Valentin Aranha Dos Santos; Leopold Schmetterer; Hannes Stegmann; Martin Pfister; Alina Messner; Gerald Schmidinger; Gerhard Garhofer; René M Werkmeister
Journal:  Biomed Opt Express       Date:  2019-01-17       Impact factor: 3.732

5.  Temporal phase unwrapping for fringe projection profilometry aided by recursion of Chebyshev polynomials.

Authors:  Shuo Xing; Hongwei Guo
Journal:  Appl Opt       Date:  2017-02-20       Impact factor: 1.980

Review 6.  VoxResNet: Deep voxelwise residual networks for brain segmentation from 3D MR images.

Authors:  Hao Chen; Qi Dou; Lequan Yu; Jing Qin; Pheng-Ann Heng
Journal:  Neuroimage       Date:  2017-04-23       Impact factor: 6.556

7.  Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation.

Authors:  Ozan Oktay; Enzo Ferrante; Konstantinos Kamnitsas; Mattias Heinrich; Wenjia Bai; Jose Caballero; Stuart A Cook; Antonio de Marvao; Timothy Dawes; Declan P O'Regan; Bernhard Kainz; Ben Glocker; Daniel Rueckert
Journal:  IEEE Trans Med Imaging       Date:  2017-09-26       Impact factor: 10.048

8.  Deep learning approach for the detection and quantification of intraretinal cystoid fluid in multivendor optical coherence tomography.

Authors:  Freerk G Venhuizen; Bram van Ginneken; Bart Liefers; Freekje van Asten; Vivian Schreur; Sascha Fauser; Carel Hoyng; Thomas Theelen; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2018-03-07       Impact factor: 3.732

9.  Automated Melanoma Recognition in Dermoscopy Images via Very Deep Residual Networks.

Authors:  Lequan Yu; Hao Chen; Qi Dou; Jing Qin; Pheng-Ann Heng
Journal:  IEEE Trans Med Imaging       Date:  2016-12-21       Impact factor: 10.048

10.  Retinal blood flow measurement by circumpapillary Fourier domain Doppler optical coherence tomography.

Authors:  Yimin Wang; Bradley A Bower; Joseph A Izatt; Ou Tan; David Huang
Journal:  J Biomed Opt       Date:  2008 Nov-Dec       Impact factor: 3.170

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.