Kolle E Thomas1, Carla Slebodnick2, Abhik Ghosh1. 1. Department of Chemistry, UiT-The Arctic University of Norway, 9037 Tromsø, Norway. 2. Department of Chemistry, Virginia Tech, 1040 Drillfield Drive, Blacksburg, Virginia 24601, United States.
Abstract
A porphyrin cis tautomer, where the two central NH protons are on adjacent pyrrole rings, has long been invoked as an intermediate in porphyrin tautomerism. Only recently, however, has such a species been isolated and structurally characterized. Thus, single-crystal X-ray structure determinations of two highly saddled free-base porphyrins, β-heptakis(trifluoromethyl)-meso-tetrakis(p-fluorophenyl)porphyrin, H2[(CF3)7TFPP], and β-octaiodo-5,10,15,20-tetrakis(4'-trifluoromethylphenyl)porphyrin, H2[I8TCF3PP], unambiguously revealed cis tautomeric structures, each stabilized as a termolecular complex with a pair of ROH (R = CH3 or H) molecules that form hydrogen-bonded N-H···O-H···N straps connecting the central NH groups with the antipodal unprotonated nitrogens. The unusual substitution patterns of these two porphyrins, however, have left open the question how readily such supramolecular assemblies might be engineered, which prompted us to examine the much more synthetically accessible β-octabromo-meso-tetraphenylporphyrins. Herein, single-crystal X-ray structures were obtained for two such compounds, 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4'-trifluoromethylphenyl)porphyrin, H2[Br8TCF3PP], and 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4'-fluorophenyl)porphyrin, H2[Br8TFPP], and although the central hydrogens could not all be located unambiguously, the electron density could be convincingly modeled as porphyrin cis tautomers, existing in each case as a bis-methanol adduct. In addition, a perusal of the Cambridge Structural Database suggests that there may well be additional examples of porphyrin cis tautomers that have not been recognized as such. We are therefore increasingly confident that porphyrin cis tautomers are readily accessible via supramolecular engineering, involving the simple stratagem of crystallizing a strongly saddled porphyrin from a solvent system containing an amphiprotic species such as water or an alcohol.
A porphyrin cis tautomer, where the two central NH protons are on adjacent pyrrole rings, has long been invoked as an intermediate in porphyrin tautomerism. Only recently, however, has such a species been isolated and structurally characterized. Thus, single-crystal X-ray structure determinations of two highly saddled free-base porphyrins, β-heptakis(trifluoromethyl)-meso-tetrakis(p-fluorophenyl)porphyrin, H2[(CF3)7TFPP], and β-octaiodo-5,10,15,20-tetrakis(4'-trifluoromethylphenyl)porphyrin, H2[I8TCF3PP], unambiguously revealed cis tautomeric structures, each stabilized as a termolecular complex with a pair of ROH (R = CH3 or H) molecules that form hydrogen-bonded N-H···O-H···N straps connecting the central NH groups with the antipodal unprotonated nitrogens. The unusual substitution patterns of these two porphyrins, however, have left open the question how readily such supramolecular assemblies might be engineered, which prompted us to examine the much more synthetically accessible β-octabromo-meso-tetraphenylporphyrins. Herein, single-crystal X-ray structures were obtained for two such compounds, 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4'-trifluoromethylphenyl)porphyrin, H2[Br8TCF3PP], and 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4'-fluorophenyl)porphyrin, H2[Br8TFPP], and although the central hydrogens could not all be located unambiguously, the electron density could be convincingly modeled as porphyrin cis tautomers, existing in each case as a bis-methanol adduct. In addition, a perusal of the Cambridge Structural Database suggests that there may well be additional examples of porphyrin cis tautomers that have not been recognized as such. We are therefore increasingly confident that porphyrin cis tautomers are readily accessible via supramolecular engineering, involving the simple stratagem of crystallizing a strongly saddled porphyrin from a solvent system containing an amphiprotic species such as water or an alcohol.
Kinetic[1−3] and quantum chemical[4,5] studies have
long implicated the cis tautomer as an intermediate in porphyrin tautomerism,
but the species have eluded direct observation until very recently.
The recent breakthrough happened in the course of single-crystal X-ray
structure determinations of two highly saddled free-base porphyrins,
β-heptakis(trifluoromethyl)-meso-tetrakis(p-fluorophenyl)porphyrin, H2[(CF3)7TFPP] (CSD: TATQEN),[6] and β-octaiodo-5,10,15,20-tetrakis(4′-trifluoromethylphenyl)porphyrin, H2[I8TCF3PP] (JIKJAR),[7] each
crystallized in the presence of a hydroxylic solvent. In each case,
the structures revealed a termolecular complex consisting of the porphyrin
cis tautomer and an ROH molecule strapped across each macrocycle face,
which stabilized the NHs in a hydrogen-bond network. The central hydrogens
were explicitly located in both structures, unambiguously confirming
the successful isolation of the cis porphyrin tautomer. Given the
rather unusual substitution patterns of these two porphyrins, which
are rather inaccessible from a synthetic point of view, we were interested
in finding cis tautomers among more readily available free-base porphyrins.
Accordingly, we turned our attention to free-base β-octabromo-meso-tetraphenylporphyrins,[8,9] which can be
synthesized quite straightforwardly, a strategy that proved rewarding.
We obtained single-crystal X-ray structures of two such porphyrins
as bis-methanol adducts, namely, 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4′-trifluoromethylphenyl)porphyrin, H2[Br8TCF3PP]·2CH3OH,[10] and 2,3,7,8,12,13,17,18-octabromo-5,10,15,20-tetrakis(4′-fluorophenyl)porphyrin, H2[Br8TFPP]·2CH3OH. Although the central hydrogens in the
two structures could not all be unambiguously located, they nonetheless
could be convincingly modeled as porphyrin cis tautomers (Table ). Furthermore, a
perusal of the Cambridge Structural Database (CSD)[11] suggests that there may well be additional examples of
porphyrin cis tautomers that have not been recognized as such (e.g.,
HOCMOB).[12] We are thus led to conclude
that porphyrin cis tautomers are far from unique or even rare but
may be stabilized and isolated in a predictable manner, potentially
opening the door to applications in such fields as organocatalysis
and molecular sensing.[13]
Table 1
Crystal and Structure Refinement Data
H2[Br8TCF3PP]·2CH3OH
H2[Br8TFPP]·2CH3OH
chemical formula
C48H18Br8F12N4·2CH3OH
C44H18Br8F4N4·2CH3OH
formula weight
1582.03
1381.99
T (K)
99.99(11)
100.00(10)
λ (Å)
1.54184 (Cu Kα)
0.71073 (Mo Kα)
crystal system
monoclinic
tetragonal
space group
P121/c1
I41/a
a (Å)
36.7959(4)
20.8825(5)
b (Å)
10.19901(8)
20.8825(5)
c (Å)
30.7172(3)
10.1100(3)
β (deg)
112.8497(11)°
volume (Å3)
10623.00(19)
4408.8(2)
Z, Z′
8, 2
4, 1/4
ρ (calc) (g·cm–3)
1.978
2.082
μ (mm–1)
7.997
7.339
F(000)
6064
2648
crystal size (mm3)
0.011 × 0.098 × 0.124
0.122 × 0.200 × 0.443
θ range (deg)
3.823–77.524
3.903–30.495
index ranges
–46 ≤ h ≤ 46, –12 ≤ k ≤ 11, –3 ≤ l ≤ 38
–29 ≤ h ≤ 28, –29 ≤ k ≤ 29, –14 ≤ l ≤ 11
measured
reflections
177057
21857
unique reflections
22336 [R(int)
= 0.0737]
3361 [R(int) = 0.0532]
completeness
100.0% (to θ = 67.684°)
99.7% (to θ = 25.242°)
absorption correction
Gaussian
Gaussian
max. and min. transmission
1.000 and
0.413
0.446 and 0.190
data/restraints/parameters
22 336/153/1505
3361/0/152
S (GooF) on F2 (all data)
1.127
1.071
R1 [I > 2σ(I)],
wR2 (all data)
0.0476, 0.1209
0.0703, 0.1878
R indices
(all data)
0.0528, 0.1241
0.0990, 0.2051
Max/min residence density (e·Å–3)
1.062/–0.634
3.147/–1.946
Results and Discussion
Figures and 2 depict the anisotropic displacement ellipsoid diagrams
for the two free-base porphyrin structures analyzed in this study,
namely, H2[Br8TCF3PP]·2CH3OH and H2[Br8TFPP]·2CH3OH. These two structures represent the third and fourth reported
examples of porphyrin cis tautomers. The two new structures are entirely
analogous to the two earlier structures and exhibit the two key features
identified as necessary for a stable cis tautomer: (1) a strongly
saddled macrocycle conformation and (2) a hydroxylic or amphiprotic
solvent that enables transannular N–H···X–H···N
hydrogen bonding on both faces of the porphyrin.
Figure 1
Anisotropic displacement
ellipsoid drawing (50% probability) depicting
the two crystallographically unique molecules in the asymmetric unit
of H2[Br8TCF3PP]·2CH3OH. The C–H hydrogens are omitted for clarity. The CF3 groups connected to C24, C31, C45, and C88 were modeled with
2-position disorder with relative occupancies that refined to 0.708(15)/0.292(15),
0.62(4)/0.38(4), 0.75(2)/0.25(2), and 0.63(4)/0.37(4), respectively.
Figure 2
Anisotropic displacement ellipsoid drawing (50% probability)
for
H2[Br8TFPP]. The C–H hydrogens are omitted
for clarity. The methanol C- and H-atoms and the pyrrole H-atoms are
disordered and constrained to 50% occupancy by symmetry. Left: top
view. Right: side view.
Anisotropic displacement
ellipsoid drawing (50% probability) depicting
the two crystallographically unique molecules in the asymmetric unit
of H2[Br8TCF3PP]·2CH3OH. The C–H hydrogens are omitted for clarity. The CF3 groups connected to C24, C31, C45, and C88 were modeled with
2-position disorder with relative occupancies that refined to 0.708(15)/0.292(15),
0.62(4)/0.38(4), 0.75(2)/0.25(2), and 0.63(4)/0.37(4), respectively.Anisotropic displacement ellipsoid drawing (50% probability)
for
H2[Br8TFPP]. The C–H hydrogens are omitted
for clarity. The methanol C- and H-atoms and the pyrrole H-atoms are
disordered and constrained to 50% occupancy by symmetry. Left: top
view. Right: side view.Saddling distortions
can be quantified by measuring the dihedral
angle between the Cβ–Cα and
C–Cβ′ vectors of the adjacent pyrrole ring. For a planar porphyrin, these
dihedrals will be zero. For saddled porphyrins, the dihedral will
have alternating positive and negative values going around the ring,
with the magnitude of the angles providing a measure of the saddling;
the larger the magnitude, the greater the distortion. For H2[Br8TCF3PP]·2CH3OH, the magnitude
of the dihedral angles ranges from 97.3(10) to 104.1(9)° and
91.6(11) to 100.9(10)° for the two crystallographically independent
molecules. For H2[Br8TFPP]·2CH3OH, because of crystallographic symmetry constraints, the saddling
dihedrals are equal in magnitude, with a value of 91.4°. Table summarizes the saddling
dihedrals for the two new structures, the two previously reported
porphyrin cis tautomers,[6,7] and from one additional
structure[12] from the literature with strong
saddling and a bridging amphiprotic molecule.
Table 2
Summary
of Cβ–Cα–Cα′–Cβ′ Dihedral Angles in Known and
Plausible cis Porphyrin
Structures
meso-substituent
β-substituent
solvent(s)
or other amphiprotic species
angles (deg)
H2[Br8TCF3PP], molecule 1
4-F–C6H4
Br
CH3OH
–104.1, 97.3, −98.8,
101.8
H2[Br8TCF3PP], molecule 2
4-F–C6H4
Br
CH3OH
100.9, −98.2, 91.6, −95.7
H2[Br8TFPP]
4-CF3–C6H4
Br
CH3OH
91.3, −91.3, 91.3, −91.3
TATQEN
4-F–C6H4
7(CF3), 1H
H2O
117.7, −118.5, 116.5, −114.1
JIKJAR
4-CF3–C6H4
I
CH3OH, H2O
–107.4,
106.5, −97.7, 100.5
HOCMOB
Ph
Ph
EtOH
106.6,
−108.0, 98.3, −93.13
For the two previously reported porphyrin
cis tautomers,[6,7] the central hydrogen atoms were
reliably located and found to participate
in a transannular N–H···X–H···N
bonding pattern on both sides of the porphyrin macrocycle. For H2[(CF3)7TFPP], the bridging solvent was
H2O, and for H2[I8TCF3PP], the solvent was CH3OH on one face and disordered
CH3OH/H2O on the opposite face. For both the
present structures, the solvent is CH3OH. Thus, all four
cis tautomers have an N–H···O–H···N
transannular hydrogen-bonding pattern.For H2[Br8TCF3PP]·2CH3OH, seven of eight
hydrogen atoms involved in the N–H···O–H···N
hydrogen-bond networks (two networks from each of the two crystallographically
independent molecules) were located experimentally. Because the difference
electron peaks used to locate the hydrogen atoms were weak, the corresponding
atom positions were not assigned at the same confidence level as for
the two earlier structures. (See the Supporting Information for a detailed procedure for locating and refining
the hydrogen-atom positions.) All of the hydrogen-atom locations were,
however, consistent with cis porphyrin tautomers.For H2[Br8TFPP]·2CH3OH, the
crystallographically imposed symmetry required the N–H hydrogens
to be disordered across all four porphyrinnitrogens, each at 50%
occupancy. Similarly, the methanol was disordered across a twofold
symmetry position requiring an O–H hydrogen disorder, with
each hydrogen atom at 50% occupancy. This disorder made it impossible
to formally prove the existence of the cis tautomer by locating the
hydrogen atoms. A careful analysis of the possible hydrogen-bonding
motifs for the cis and trans tautomers, however, demonstrated that
only the cis tautomer gives a chemically reasonable hydrogen-bonding
pattern (vide infra). Table summarizes the hydrogen-bonding distances and angles for
the two structures reported here. Figure provides an expanded view of the hydrogen-bonding
networks for the two unique molecules of H2[Br8TCF3PP]·2CH3OH, while Figure provides an alternative schematic
representation of the transannular hydrogen bonding in both new structures.
Table 3
Hydrogen-Bond Geometries (Å and
deg)
D–H···A
d(D–H)
d(H···A)
d(D···A)
∠(DHA)
H2[Br8TCF3PP]·2CH3OH
N(1)–H(1)···O(1)
0.88(2)
1.95(3)
2.812(5)
166(6)
N(4)–H(4)···O(2)
0.87(2)
1.98(2)
2.844(5)
173(5)
N(5)–H(5)···O(4)
0.87(2)
1.95(3)
2.797(5)
165(6)
N(8)–H(8)···O(3)
0.87(2)
2.07(3)
2.923(5)
166(6)
O(1)–H(1S)···N(3)
0.83(2)
2.09(3)
2.894(5)
164(6)
O(2)–H(2S)···N(2)
0.84(2)
2.11(4)
2.908(5)
159(8)
O(3)–H(3S)···N(6)
0.859(19)
2.022(19)
2.837(5)
158(6)
O(4)–H(4S)···N(7)
0.84(2)
2.05(2)
2.884(5)
174(9)
H2[Br8TFPP]·2CH3OH
N(1)–H(1)···O(1)
0.88
2.00
2.862(7)
168.2
O(1)–H(1A)···N(1)#1a
0.84
2.05
2.862(7)
161.9
Symmetry transformations used to
generate equivalent atoms: #1 −x + 1, −y + 1/2, z.
Figure 3
Expanded
view of the hydrogen-bonding networks in the two molecules
of the asymmetric unit of H2[Br8TCF3PP]·2CH3OH.
Figure 4
Simplified
schematic representation of the two structures obtained
in this work. The four nitrogen atoms connected by solid lines represent
the saddle-shaped porphyrin. The two CH3OH solvent molecules
are poised directly above and below the porphyrin, with each methanol
oxygen within hydrogen-bonding distance of a pair of trans nitrogen
atoms of the porphyrin. (a) Depiction of the hydrogen-bonding network
in H2[Br8TCF3PP]·2CH3OH modeled as an ordered cis tautomer. (b) Disorder model in H2[Br8TFPP]·2CH3OH. Atoms in purple
are at 50% occupancy. Careful analysis of the disorder is necessary
to deduce chemically reasonable hydrogen-bonding networks.
Expanded
view of the hydrogen-bonding networks in the two molen class="Chemical">cules
of the asymmetric unit of H2[Br8TCF3PP]·2CH3OH.
Simplified
schematic representation of the two structures obtained
in this work. The four nitrogen atoms connected by solid lines represent
the saddle-shaped porphyrin. The two CH3OH solvent molecules
are poised directly above and below the porphyrin, with each methanoloxygen within hydrogen-bonding distance of a pair of trans nitrogen
atoms of the porphyrin. (a) Depiction of the hydrogen-bonding network
in H2[Br8TCF3PP]·2CH3OH modeled as an ordered cis tautomer. (b) Disorder model in H2[Br8TFPP]·2CH3OH. Atoms in purple
are at 50% occupancy. Careful analysis of the disorder is necessary
to deduce chemically reasonable hydrogen-bonding networks.Symmetry transformations used to
generate equivalent atoms: #1 −x + 1, −y + 1/2, z.Our inability to locate the methanol OH n class="Chemical">hydrogens
led to an ambiguity
as to whether the correct structure is the doubly solvated, neutral
porphyrin, H2[Por]·2CH3OH, or the porphyrin
diacid with methoxide counterions, [H4Por][OCH3]2. The latter species is readily rejected on chemical
grounds, since a weak base such as a free base porphyrin (assuming
a pKb similar to pyridine, i.e., ∼5)
is not expected to deprotonate a weak acid such as methanol (pKa = 15.5).
The reader may find it useful
to explicitly consider the possible
hydrogen-bonding networks for porphyrin trans tautomers. Figure a depicts two equally
contributing structures that average to give the disorder model shown
in Figure b. In this
model, a hydrogen-bond network is generated by protonating one methanol
to give CH3OH2+ and deprotonating
another methanol to give CH3O–, an unlikely
scenario that we deemed chemically unreasonable. Figure b shows two of the four equally
contributing conformations that also average to give the disorder
model in Figure b.
In this model, the methanol on the “protonated” face
of the saddled trans tautomer acts as an acceptor
for both N–H protons, with the OH hydrogen directed away from
the porphyrin and not participating in any hydrogen bonding. The methanol
on the “unprotonated” face can then form a hydrogen
bond to only one nitrogen, leaving an N···O within
hydrogen-bonding distance [2.862(7) Å] but not actually participating
in hydrogen bonding. A symmetric hydrogen bond with the hydrogen atom
equidistant from the two nitrogen atoms was considered but is not
reasonable, as it would require a C–O–H angle of ∼143°,
which deviates substantially from the ideal tetrahedral angle of 109.5°.
In addition, the O–H···N angle was estimated
at ∼120°, well below the expected range of ∼150–180°
for medium-to-strong hydrogen bonds.
Figure 5
Two trans tautomer models. (a) Two equally
contributing trans-conformation models that average
to give the structure
in Figure b. To obtain
reasonable hydrogen-bonding motifs in this model, each contributing
structure must have a protonated (CH3OH2+) and a deprotonated (CH3O–)
“methanol.” These chemically unreasonable components
are highlighted in red. (b) Two of the four equally contributing trans tautomer models with the methanol hydrogen on the
protonated side of the saddle-shaped porphyrin oriented away from
the trans N–H atoms to give a satisfactory
hydrogen-bonding motif on that face. The opposite face, however, has
a close N···O distance, 2.862(7) Å (red dotted
line), with no hydrogen atom involved in a hydrogen bond. The green
and purple atoms represent two different conformations of the disordered
methanol. The two other equally contributing conformations are not
shown but shown are the equivalent structures with the other pair
of nitrogen atoms protonated.
Two trans tautomer models. (a) Two equally
contributing trans-conformation models that average
to give the structure
in Figure b. To obtain
reasonable hydrogen-bonding motifs in this model, each contributing
structure must have a protonated (CH3OH2+) and a deprotonated (CH3O–)
“methanol.” These chemically unreasonable components
are highlighted in red. (b) Two of the four equally contributing trans tautomer models with the methanolhydrogen on the
protonated side of the saddle-shaped porphyrin oriented away from
the trans N–H atoms to give a satisfactory
hydrogen-bonding motif on that face. The opposite face, however, has
a close N···O distance, 2.862(7) Å (red dotted
line), with no hydrogen atom involved in a hydrogen bond. The green
and purple atoms represent two different conformations of the disordered
methanol. The two other equally contributing conformations are not
shown but shown are the equivalent structures with the other pair
of nitrogen atoms protonated.Figure depicts
four equally contributing conformations of a porphyrin cis tautomer
that average to give the disorder model depicted in Figure b. Each conformation gives
a reasonable hydrogen-bonding motif with neutral methanol to form
the transannular N–H···X–H···N
hydrogen-bonding network proposed in our earlier work.
Figure 6
Four equally contributing
conformations for H2[Br8TFPP]·2CH3OH. Disordered groups, each at 50%
occupancy, are shown in purple. The cis tautomer is the only form
that gives a chemically reasonable hydrogen-bonding model with neutral
methanol. Upon averaging, the four structures depicted above give
the disorder model shown in Figure b.
Four equally contributing
conformations for H2[Br8TFPP]·2CH3OH. Disordered groups, each at 50%
occupancy, are shown in purple. The cis tautomer is the only form
that gives a chemically reasonable hydrogen-bonding model with neutral
methanol. Upon averaging, the four structures depicted above give
the disorder model shown in Figure b.A longstanding observation
worth recalling in this connection is
that the Cα–N–Cα angles
serve as an indirect but quite reliable probe of the N-protonation sites in free-base porphyrins, with unprotonated pyrrole
groups exhibiting Cα–N–Cα angles in the 106–108° range and protonated pyrrole
groups exhibiting Cα–N–Cα angles in the 110–112° range.[14−20] For the two crystallographically unique molecules of H2[Br8TCF3PP]·2CH3OH, the angles
for the putative protonated pyrrole rings are 111.0(3), 111.0(3),
111.3(4), and 110.5(4)° and those for putative unprotonated pyrrole
rings are 107.4(4), 107.4(3), 107.8(4), and 107.2(4)°, in excellent
agreement with structural precedent. For H2[Br8TFPP]·2CH3OH, the Cα–N–Cα angle is 109.0(5)°, a reasonable value considering
that the disorder model entails an averaging of two protonated and
two unprotonated pyrrole rings.With four porphyrin cis tautomers
documented by us (including the
two here), a question that begs to be answered is “how many
more might there be in the literature?”. This question proved
more difficult to answer than expected for multiple reasons. First,
the N–H hydrogen-atom positions are often difficult or impossible
to locate in X-ray crystal structures. Positional disorder is common.
Porphyrins also commonly crystallize with solvents that are disordered,
which contributes to the difficulty in assigning hydrogen-atom positions.
Second, even when the X-ray diffraction data are good, porphyrin chemists
have generally taken for granted that free-base porphyrins are trans tautomers and have not concerned themselves with the
hydrogen-atom positions in crystal structures. Third, a surprising
number of porphyrin structures in the CSD have incorrect occupancies
assigned to the N–H hydrogen atoms and the chemical formulas
of disordered solvents. In such cases, the structure reported in the
paper does not match the structure and/or chemical formula in the
CIF, making substructure searches inefficient.After extensive
searching in the CSD, only one additional convincing
example of a cis tautomer was identified (HOCMOB[12]). Many similar examples were identified, however, in the
form of monoprotonated[21,22] and diprotonated[22−25] porphyrins with carboxylate counterions. These protonated porphyrins
exhibit essentially the same transannular bonding motif as the cis
tautomers. Thus, whereas the cis tautomers have N–H···X–H···N
linkages, the analogous linkages in the protonated porphyrins are
better represented as N–H···X···H–N,
i.e., the key difference is in the relative distance of the hydrogen
atoms from the porphyrinnitrogen atoms vs. the amphiprotic bridging
ligand. If the hydrogen atoms are closer to the bridging solvent,
the system is best viewed as an H2[Por]·2HX cis tautomer.
If one or both are closer to the pyrrolenitrogens, the system is
better described as H3[Por]+·X–·HX or H4[Por]2+·2X–, with the relative pKas determining
the product formed.An interesting twist to the above story
is provided by the structure
of free-base 2,3,12,13-tetrachloro-5,7,8,10,15,17,18,20-octaphenylporphyrin·2CH3OH (SUNXIJ).[26] The structure satisfies
our stated criteria for cis tautomer formation, namely, a strongly
saddled porphyrin macrocycle and the presence of an amphiprotic solvent.
Yet, a different hydrogen-bond pattern forms, one that stabilizes
the trans tautomer (Figure ). Compared with the cis-tautomer structures,
the methanol molecules in SUNXIJ also form hydrogen bonds with each
other (O1–H···O2 in Figure ). As a result, the oxygen atom O1 is only
available to the porphyrin as a hydrogen-bond acceptor and does so
for both NH units (N2 and N4) of the trans tautomer.
The second methanol is displaced off-center relative to the porphyrin
core and forms a hydrogen bond with only one of the unprotonated nitrogens
(O2–H···N1). Atom N3 of the porphyrin is not
involved in any hydrogen bonding, with the closest nonbonded distance
being to the methyl hydrogen of C70 (HC70···N3 = 2.525
Å). Thus, although a saddling distortion and an amphiprotic solvent
are required, they do not guarantee the formation of a cis tautomer.
Figure 7
Crystal
structure of the SUNXIJ porphyrin core and methanol solvate
depicting the hydrogen-bonding network.
Crystal
structure of the SUNXIJn class="Chemical">porphyrin core and methanol solvate
depicting the hydrogen-bonding network.
The reason SUNXIJ does not form a cis tautomer is most probably
because of the electronic effects of antipodal β-tetrachloro
substitution. Several additional examples are known where antipodal
β-tetrahalogenation freezes NH tautomerism and unambiguously
localizes the central NH hydrogens on the unhalogenated pyrrole rings.[27] These observations beg the question of whether
certain substituents by themselves might be able to stabilize the
cis tautomer. Density functional theory calculations in one of our
laboratories suggest that the answer is “yes, but exceedingly
rarely.”[28]
Conclusions
Although
the locations of the central hydrogens of the two structures
reported here could not be unambiguously assigned, the electron density
could be satisfactorily modeled in terms of porphyrin cis tautomers.
The structures are stabilized by transannular hydrogen bonding with
methanol exactly as previously observed in our two earlier reports.
In all cases, the key requirements appear to be a strongly saddled
porphyrin macrocycle and a pair of hydroxylic or amphiprotic solvent
molecules providing the critical transannular N–H···X–H···N
straps that stabilize the cis tautomer. With four examples now reported
by us and at least an additional one in the literature, porphyrin
cis tautomers may be regarded as relatively readily accessible from
appropriate substrates crystallized from suitable amphiprotic solvents.
Besides broadening our appreciation of hydrogen bonding, tautomerism,
and crystal/supramolecular engineering, can porphyrin tautomers prove
useful in a practical sense? Can supramolecular assemblies of the
type disclosed here provide a platform for the sensing of alcohols
and other amphiprotic hydrogen-bond donors or for that matter for
organocatalysis? Also, as chiral assemblies with a C2 axis along a pair of opposite meso carbons, might these
constructs exhibit interesting chiroptical properties? These remain
fascinating questions for the future.
Experimental Section
Materials
and Instrumentation
All reagents and solvents
were used as purchased, except pyrrole, which was predried and distilled
from n class="Chemical">CaH2 under vacuum. Silica (150 Å pore size, 35–70
μm particle size, Davisil) and both neutral and basic alumina
(activity I) were used for column (flash) chromatography.
Ultraviolet–visible
spectra were recorded on an HP 8453 spectrophotometer in CH2Cl2 at room temperature. NMR spectra were recorded on
a Mercury Plus Varian spectrometer (400 MHz for 1H and
376 MHz for 19F) at 298 K. 19F shifts (δ)
in ppm were referenced to 2,2,2-trifluoroethanol-d3 (δ = −77.8 ppm). Mass spectra were recorded
on a Waters Micromass matrix-assisted laser desorption/ionization
(MALDI) Micro MX mass spectrometer with α-cyano-4-hydroxycinnamic
acid as the matrix.
Syntheses
Meso-tetrakis(4-fluorophenyl)porphyrin,
H2[TFPP], and meso-tetrakis(4-trifluoromethylphenyl)porphyrin,
H2[TCF3PP], were synthesized via modified[29,30] Adler–Longo[31] procedures. The
corresponding Cu complexes were prepared by refluxing the free bases
overnight with Cu(OAc)2·H2O (10 equiv)
in DMF and purified via flash chromatography as described for copper
tetraphenylporphyrin.[32] The copper octabromoporphyrinsCu[Br8TXPP] (X = F, CF3) were prepared following
a literature protocol.[33] To obtain Cu[Br8TFPP], Cu[TFPP] was brominated in CHCl3 with 24
equiv Br2 over 4 h. For Cu[Br8TCF3PP], complete β-bromination was accomplished overnight with
80 equiv Br2. The free-base octabromoporphyrins H2[Br8TXPP] (X = F, CF3) were then prepared via
demetallation of the corresponding Cu complexes with HBr in 1:1 v/v
chloroform/trifluoroacetic acid (TFA),[34] as described in detail below for the known compound H2[Br8TCF3PP].
To a solution
of Cu[n class="Chemical">Br8TCF3P] (100 mg) in CHCl3 (10 mL), TFA (99+%, 10 mL) was added, followed by 6 drops of HBr
(33% in acetic acid). After stirring for 1 h, the mixture was washed
with distilled water (40 mL x 3) and extracted with CHCl3. The CHCl3 phase was washed twice with saturated aqueous
NaHCO3 (40 mL each time), dried with anhydrous Na2SO4, and filtered, and the filtrate was rotary-evaporated
to dryness. The residue obtained was crystallized from 1:2 CHCl3/n-hexane to give analytically pure bluish-green
needles of the target compound. Yield: 90 mg (94%). All spectroscopic
data matched those reported earlier.[10] Rectangular
crystals suitable for X-ray structure determination were obtained
from evaporation of a 1:1 n-hexane/CH2Cl2 solution of the porphyrin with traces of methanol
within 2 weeks.
The green residue obtained
after work-up was crystallized from 1:1 CHCl3/CH3OH yielding an analytically pure, green solid (83 mg, 86%). UV–vis λmax (nm; ε ×
10–4, M–1 cm–1): 365 (2.41), 465 (15.77), 571 (0.98), 622 (0.75), 729 (0.28). 1H NMR δ (tetrahydrofuran (THF)-d, δ 3.58, 1.73 ppm): 8.19 (dd, 8H, 5,10,15,20-o or
-m, J = 8.6 and 5.48 Hz, Ph); 7.53
(t, 8H, J = 8.8 Hz, 5,10,15,20-m or -o, Ph). 19F NMR δ (THF-d): −112.45
to −112.55 (m, 4F). MS (MALDI-TOF, major isotopomer): [M +
H]+ = 1318.38 (expt), 1318.49 (calcd). Elemental analysis
found (calcd): C 41.50 (40.10), H 1.92 (1.38), N 3.79 (4.25). Diffusion
from methanol into a chloroform solution of the compound yielded X-ray-quality
rectangular needles in about 2 weeks.
X-ray Structure Determinations
Data sets were collected
on a Rigaku Oxford Diffraction Synergy-S diffractometer equipped with
a HyPix6000HE detector and operating with Cu Kα radiation (H2Br8TCF3PP·2CH3OH) or
a Gemini E Ultra diffractometer operating with Mo Kα radiation
(H2Br8TFPP·2CH3OH). An Oxford
Cryosystems Cryostream 800 Plus was used to cool the samples to 100
K. The data collection routine, unit cell refinement, and data processing
were carried out with the program CrysAlisPro.[35] The structures were solved using SHELXT[36] and refined using SHELXL[37] via
Olex2.[38] The crystal data and structure
refinement data are summarized in Table . Olex 2 was used for generating molecular
graphics.In the X-ray analysis of H2[Br8TCF3PP]·2CH3OH, a brown plate (0.01 ×
0.10 × 0.12 mm3) was chosen for analysis. The crystal
had a minor twin component (∼5%). With such a small component,
attempts to process the data as a non-merohedral twin led to poorer
refinements so the crystal was treated as a single unit. The Laue
symmetry and systematic absences were consistent with the monoclinic
space group P21/c. The
asymmetric unit consisted of two porphyrin molecules and four CH3OH solvent molecules (as shown in Figure ). Four of the eight unique CF3 groups were disordered; each was modeled with 2-position disorder
with relative occupancies refining to the ratios presented in Figure . The SHELX RIGU
command was used to maintain reasonable anisotropic displacement ellipsoids
for each CF3 group. In addition, when there was substantial
atom overlap in the disordered group, EADP was used to constrain the
anisotropic displacement ellipsoids to be equal. A riding model was
used for the C–H hydrogen atoms. All four of the N–H
hydrogen atoms from porphyrin cores and three of the four O–H
hydrogen atoms from the methanol molecules were located experimentally
from the difference electron density map. The hydrogen atom bonded
to O3 could not be located and was placed in an optimized position
for an alcohol −OH. An in-depth discussion of the hydrogen-atom
position assignments and refinement is included in the SI. The final refinement model involved anisotropic
displacement parameters for nonhydrogen atoms.For H2[Br8TFPP]·2CH3OH, a
brown rod (0.12 × 0.20 × 0.44 mm3) was chosen
for analysis. The Laue symmetry and systematic absences were consistent
with the tetragonal space group I41/a. The porphyrin was found to have crystallographically
imposed 4̅ symmetry, giving Z = 4 and Z′ = 0.25. The final refinement model involved anisotropic
displacement parameters for nonhydrogen atoms. The methanol was modeled
with 2-position disorder and relative occupancies were constrained
to 50% by symmetry. A riding model was used for the C–H hydrogen
atoms. Because of the 4̅ symmetry of the porphyrin (Wyckoff
position 4a, origin choice 2), and to maintain charge
neutrality on the porphyrin ring, the N–H atoms were by necessity
disordered across the four nitrogen atoms in the structure model,
each at 50% occupancy. Similarly, the methanol was disordered across
a twofold symmetry position (Wyckoff position 8e)
requiring a O–H hydrogen disorder, with each hydrogen atom
at 50% occupancy. Attempts to locate the disordered hydrogen atoms
from the difference electron density map were unsuccessful, even when
looking at the ∞–1.5 Å data, where the hydrogen
atom scattering is a stronger contributor to the structure factors.
In the final refinement model, the one crystallographically unique
N–H hydrogen was constrained with AFIX 43 (aromatic nitrogen)
and the one unique methanol O–H hydrogen was constrained with
AFIX 147 (idealized O–H group with torsion angle defined to
place the hydrogen atom at the position of maximum electron density).
Authors: Eliane do Nascimento; Gilson de F Silva; Fabiana A Caetano; Marcela A M Fernandes; Dayse C da Silva; Maria Eliza M D de Carvalho; Jean Michel Pernaut; Júlio S Rebouças; Ynara M Idemori Journal: J Inorg Biochem Date: 2005-05 Impact factor: 4.155