Literature DB >> 32335943

In Silico Identification of Chemicals Capable of Binding to the Ecdysone Receptor.

Claire L Mellor1,2, Knut Erik Tollefsen3, Carlie LaLone4, Mark T D Cronin1, James W Firman1.   

Abstract

The process of molting, known alternatively as ecdysis, is a feature integral in the life cycles of species across the arthropod phylum. Regulation occurs as a function of the interaction of ecdysteroid hormones with the arthropod nuclear ecdysone receptor-a process preceding the triggering of a series of downstream events constituting an endocrine signaling pathway highly conserved throughout environmentally prevalent insect, crustacean, and myriapod organisms. Inappropriate ecdysone receptor binding and activation forms the essential molecular initiating event within possible adverse outcome pathways relating abnormal molting to mortality in arthropods. Definition of the characteristics of chemicals liable to stimulate such activity has the potential to be of great utility in mitigation of hazards posed toward vulnerable species. Thus the aim of the present study was to develop a series of rule-sets, derived from the key structural and physicochemical features associated with identified ecdysone receptor ligands, enabling construction of Konstanz Information Miner (KNIME) workflows permitting the flagging of compounds predisposed to binding at the site. Data describing the activities of 555 distinct chemicals were recovered from a variety of assays across 10 insect species, allowing for formulation of KNIME screens for potential binding activity at the molecular initiating event and adverse outcome level of biological organization. Environ Toxicol Chem 2020;39:1438-1450.
© 2020 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC. © 2020 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Entities:  

Keywords:  Arthropod; Computational toxicology; Ecdysone receptor; Endocrine-disrupting compounds; Invertebrate toxicology

Mesh:

Substances:

Year:  2020        PMID: 32335943      PMCID: PMC7781155          DOI: 10.1002/etc.4733

Source DB:  PubMed          Journal:  Environ Toxicol Chem        ISSN: 0730-7268            Impact factor:   4.218


  32 in total

1.  Screening of environmental contaminants for ecdysteroid agonist and antagonist activity using the Drosophila melanogaster B(II) cell in vitro assay.

Authors:  L Dinan; P Bourne; P Whiting; T S Dhadialla; T H Hutchinson
Journal:  Environ Toxicol Chem       Date:  2001-09       Impact factor: 3.742

2.  Sequencing and structural homology modeling of the ecdysone receptor in two chrysopids used in biological control of pest insects.

Authors:  Moises João Zotti; Olivier Christiaens; Pierre Rougé; Anderson Dionei Grutzmacher; Paulo Dejalma Zimmer; Guy Smagghe
Journal:  Ecotoxicology       Date:  2012-01-24       Impact factor: 2.823

Review 3.  Practical approaches to adverse outcome pathway development and weight-of-evidence evaluation as illustrated by ecotoxicological case studies.

Authors:  Kellie A Fay; Daniel L Villeneuve; Carlie A LaLone; You Song; Knut Erik Tollefsen; Gerald T Ankley
Journal:  Environ Toxicol Chem       Date:  2017-03-31       Impact factor: 3.742

Review 4.  Ecdysone Receptor Agonism Leading to Lethal Molting Disruption in Arthropods: Review and Adverse Outcome Pathway Development.

Authors:  You Song; Daniel L Villeneuve; Kenji Toyota; Taisen Iguchi; Knut Erik Tollefsen
Journal:  Environ Sci Technol       Date:  2017-04-10       Impact factor: 9.028

5.  Screening Chemicals for Receptor-Mediated Toxicological and Pharmacological Endpoints: Using Public Data to Build Screening Tools within a KNIME Workflow.

Authors:  F P Steinmetz; C L Mellor; T Meinl; M T D Cronin
Journal:  Mol Inform       Date:  2015-02-20       Impact factor: 3.353

6.  Synthesis, binding and bioactivity of gamma-methylene gamma-lactam ecdysone receptor ligands: advantages of QSAR models for flexible receptors.

Authors:  Woldeamanuel Birru; Ross T Fernley; Lloyd D Graham; Julian Grusovin; Ronald J Hill; Albert Hofmann; Linda Howell; Peter J James; Karen E Jarvis; Wynona M Johnson; Dionne A Jones; Christa Leitner; Andris J Liepa; George O Lovrecz; Louis Lu; Roland H Nearn; Brian J O'Driscoll; Tram Phan; Matthew Pollard; Kathleen A Turner; David A Winkler
Journal:  Bioorg Med Chem       Date:  2010-06-15       Impact factor: 3.641

Review 7.  Ecdysone control of developmental transitions: lessons from Drosophila research.

Authors:  Naoki Yamanaka; Kim F Rewitz; Michael B O'Connor
Journal:  Annu Rev Entomol       Date:  2012-10-15       Impact factor: 19.686

8.  Synthesis and SAR of alpha-acylaminoketone ligands for control of gene expression.

Authors:  Colin M Tice; Robert E Hormann; Christine S Thompson; Jennifer L Friz; Caitlin K Cavanaugh; Enrique L Michelotti; Javier Garcia; Ernesto Nicolas; Fernando Albericio
Journal:  Bioorg Med Chem Lett       Date:  2003-02-10       Impact factor: 2.823

9.  Binding mode of ecdysone agonists to the receptor: comparative modeling and docking studies.

Authors:  Atsushi Kasuya; Yoshihiro Sawada; Yoshihisa Tsukamoto; Keiji Tanaka; Tetsuya Toya; Mikio Yanagi
Journal:  J Mol Model       Date:  2003-01-14       Impact factor: 1.810

Review 10.  Arthropod nuclear receptors and their role in molting.

Authors:  Yoshiaki Nakagawa; Vincent C Henrich
Journal:  FEBS J       Date:  2009-09-30       Impact factor: 5.542

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  1 in total

Review 1.  A Crab Is Not a Fish: Unique Aspects of the Crustacean Endocrine System and Considerations for Endocrine Toxicology.

Authors:  Thomas Knigge; Gerald A LeBlanc; Alex T Ford
Journal:  Front Endocrinol (Lausanne)       Date:  2021-03-02       Impact factor: 5.555

  1 in total

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