Literature DB >> 32332136

A Soluble Fiber Diet Increases Bacteroides fragilis Group Abundance and Immunoglobulin A Production in the Gut.

Akihito Nakajima1, Takashi Sasaki2, Kikuji Itoh3, Takashi Kitahara4, Yoshinori Takema4, Keiichi Hiramatsu5, Dai Ishikawa6, Tomoyoshi Shibuya6, Osamu Kobayashi6, Taro Osada6, Sumio Watanabe6, Akihito Nagahara6.   

Abstract

Immunoglobulin A (IgA) is essential for defense of the intestinal mucosa against harmful pathogens. Previous studies have shown that Bacteroidetes, the major phylum of gut microbiota together with Firmicutes, impact IgA production. However, the relative abundances of species of Bacteroidetes responsible for IgA production were not well understood. In the present study, we identified some specific Bacteroidetes species that were associated with gut IgA induction by hsp60-based profiling of species distribution among Bacteroidetes The levels of IgA and the expression of the gene encoding activation-induced cytidine deaminase (AID) in the large intestine lamina propria, which is crucial for class switch recombination from IgM to IgA, were increased in soluble high-fiber diet (sHFD)-fed mice. We found that Bacteroides acidifaciens was the most abundant Bacteroidetes species in both sHFD- and normal diet-fed mice. In addition, the gut IgA levels were associated with the relative abundance of Bacteroides fragilis group species such as Bacteroides faecis, Bacteroides caccae, and Bacteroides acidifaciens Conversely, the ratio of B. acidifaciens to other Bacteroidetes species was reduced in insoluble high-fiber diet fed- and no-fiber diet-fed mice. To investigate whether B. acidifaciens increases IgA production, we generated B. acidifaciens monoassociated mice and found increased gut IgA production and AID expression. Collectively, soluble dietary fiber increases the ratio of gut Bacteroides fragilis group, such as B. acidifaciens, and IgA production. This might improve gut immune function, thereby protecting against bowel pathogens and reducing the incidence of inflammatory bowel diseases.IMPORTANCE Immunoglobulin A (IgA) is essential for defense of the intestinal mucosa against harmful pathogens. Gut microbiota impact IgA production, but the specific species responsible for IgA production remain largely elusive. Previous studies have shown that IgA and Bacteroidetes, the major phyla of gut microbiota, were increased in soluble high-fiber diet-fed mice. We show here that the levels of IgA in the gut and the expression of activation-induced cytidine deaminase (AID) in the large intestine lamina propria, which is crucial for class switch recombination from IgM to IgA, were correlated with the abundance of Bacteroides fragilis group species such as Bacteroides faecis, Bacteroides caccae, and Bacteroides acidifaciens B. acidifaciens monoassociated mice increased gut IgA production and AID expression. Soluble dietary fiber may improve gut immune function, thereby protecting against bowel pathogens and reducing inflammatory bowel diseases.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  Bacteriodes vulgatus; Bacteroides acidifacienszzm321990; Bacteroides fragilis group; Bacteroideteszzm321990; Pearson’s correlation coefficient; Spearman's rank correlation coefficient; activation induced cytidine deaminase; dextran sulfate sodium-induced colitis; dietary fiber; hsp60-based profiling analysis; immunoglobulin A; metabolome analysis; no-fiber diet; soluble high-fiber diet

Mesh:

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Year:  2020        PMID: 32332136      PMCID: PMC7301863          DOI: 10.1128/AEM.00405-20

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  44 in total

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Authors:  Mitsuo Sakamoto; Moriya Ohkuma
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2.  Diet, gut microbiota and immune responses.

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Review 3.  Immunoglobulin class-switch DNA recombination: induction, targeting and beyond.

Authors:  Zhenming Xu; Hong Zan; Egest J Pone; Thach Mai; Paolo Casali
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4.  Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells.

Authors:  Yukihiro Furusawa; Yuuki Obata; Shinji Fukuda; Takaho A Endo; Gaku Nakato; Daisuke Takahashi; Yumiko Nakanishi; Chikako Uetake; Keiko Kato; Tamotsu Kato; Masumi Takahashi; Noriko N Fukuda; Shinnosuke Murakami; Eiji Miyauchi; Shingo Hino; Koji Atarashi; Satoshi Onawa; Yumiko Fujimura; Trevor Lockett; Julie M Clarke; David L Topping; Masaru Tomita; Shohei Hori; Osamu Ohara; Tatsuya Morita; Haruhiko Koseki; Jun Kikuchi; Kenya Honda; Koji Hase; Hiroshi Ohno
Journal:  Nature       Date:  2013-11-13       Impact factor: 49.962

5.  FLASH: fast length adjustment of short reads to improve genome assemblies.

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Journal:  Bioinformatics       Date:  2011-09-07       Impact factor: 6.937

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Authors:  Myunghoo Kim; Yaqing Qie; Jeongho Park; Chang H Kim
Journal:  Cell Host Microbe       Date:  2016-07-28       Impact factor: 21.023

7.  Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis.

Authors:  Aurélien Trompette; Eva S Gollwitzer; Koshika Yadava; Anke K Sichelstiel; Norbert Sprenger; Catherine Ngom-Bru; Carine Blanchard; Tobias Junt; Laurent P Nicod; Nicola L Harris; Benjamin J Marsland
Journal:  Nat Med       Date:  2014-01-05       Impact factor: 53.440

8.  The Microbial Composition of Bacteroidetes Species in Ulcerative Colitis Is Effectively Improved by Combination Therapy With Fecal Microbiota Transplantation and Antibiotics.

Authors:  Dai Ishikawa; Takashi Sasaki; Masahito Takahashi; Kyoko Kuwahara-Arai; Keiichi Haga; Shoko Ito; Koki Okahara; Akihito Nakajima; Tomoyoshi Shibuya; Taro Osada; Keiichi Hiramatsu; Sumio Watanabe; Akihito Nagahara
Journal:  Inflamm Bowel Dis       Date:  2018-11-29       Impact factor: 5.325

9.  The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data.

Authors:  Matthew G Links; Tim J Dumonceaux; Sean M Hemmingsen; Janet E Hill
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10.  Diet rapidly and reproducibly alters the human gut microbiome.

Authors:  Lawrence A David; Corinne F Maurice; Rachel N Carmody; David B Gootenberg; Julie E Button; Benjamin E Wolfe; Alisha V Ling; A Sloan Devlin; Yug Varma; Michael A Fischbach; Sudha B Biddinger; Rachel J Dutton; Peter J Turnbaugh
Journal:  Nature       Date:  2013-12-11       Impact factor: 49.962

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Journal:  J Anim Sci       Date:  2022-05-01       Impact factor: 3.338

2.  Relandscaping the Gut Microbiota with a Whole Food: Dose-Response Effects to Common Bean.

Authors:  Tymofiy Lutsiv; John N McGinley; Elizabeth S Neil-McDonald; Tiffany L Weir; Michelle T Foster; Henry J Thompson
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3.  Colonic In Vitro Model Assessment of the Prebiotic Potential of Bread Fortified with Polyphenols Rich Olive Fiber.

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Journal:  Nutrients       Date:  2021-02-27       Impact factor: 5.717

4.  Nicotine Oral Administration Attenuates DSS-Induced Colitis Through Upregulation of Indole in the Distal Colon and Rectum in Mice.

Authors:  Akihito Nakajima; Tomoyoshi Shibuya; Takashi Sasaki; Yu Jie Lu; Dai Ishikawa; Keiichi Haga; Masahito Takahashi; Naoko Kaga; Taro Osada; Nobuhiro Sato; Akihito Nagahara
Journal:  Front Med (Lausanne)       Date:  2021-12-13

5.  Antibiotic Exposure Aggravates Bacteroides-Linked Uremic Toxicity in the Gut-Kidney Axis.

Authors:  Navin Ray; Hoyoung Jeong; Dasom Kwon; Juil Kim; Yuseok Moon
Journal:  Front Immunol       Date:  2022-03-24       Impact factor: 7.561

6.  SARS-CoV-2 triggered oxidative stress and abnormal energy metabolism in gut microbiota.

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Journal:  MedComm (2020)       Date:  2022-01-17

Review 7.  Biofilm-based delivery approaches and specific enrichment strategies of probiotics in the human gut.

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Review 8.  Microbiota, IgA and Multiple Sclerosis.

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Authors:  Avilene Rodríguez-Lara; Julio Plaza-Díaz; Patricia López-Uriarte; Alejandra Vázquez-Aguilar; Zyanya Reyes-Castillo; Ana I Álvarez-Mercado
Journal:  Nutrients       Date:  2022-03-13       Impact factor: 5.717

  9 in total

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