| Literature DB >> 32330151 |
Naveen Kumar1, Yogesh Chander1, Thachamvally Riyesh1, Nitin Khandelwal1, Ram Kumar1, Harish Kumar1, Bhupendra N Tripathi1, Sanjay Barua1.
Abstract
Bovine herpesvirus 1 (BoHV1) and 5 (BoHV5) are genetically and antigenically related alphaherpesviruses. Infection with one virus induces protective immunity against the other. However, disease associated with BoHV1 and BoHV5 varies significantly; whereas BoHV1 infection is usually associated with rhinotracheitis and abortion, BoHV5 causes encephalitis in cattle. BoHV5 outbreaks are sporadic and mainly restricted to the South American countries. We report BoHV5 infection for the first time from aborted cattle in India. Based on the characteristic cytopathic effects in MDBK cells, amplification of the viral genome by PCR, differential PCR for BoHV1/BoHV5, nucleotide sequencing and restriction endonuclease patterns, identity of the virus was confirmed as BoHV5 subtype A. Serum samples from the aborted cattle strongly neutralized both BoHV1 and BoHV5 suggesting an active viral infection in the herd. Upon UL27, UL44 and UL54 gene-based sequence and phylogenetic analysis, the isolated virus clustered with BoHV5 strains and showed highest similarity with the Brazilian BoHV5 strains.Entities:
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Year: 2020 PMID: 32330151 PMCID: PMC7182196 DOI: 10.1371/journal.pone.0232093
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Oligos to amplify various agents potentially involved in abortion.
| Agent | Target Gene | Nucleotide sequences of the oligos | Product size (bp) | Thermocycler conditions | References |
|---|---|---|---|---|---|
| Forward: | 484 | Annealing = 58°C | [ | ||
| Reverse: | Extension = 40 s | ||||
| Forward: | 534 | Annealing = 58°C | [ | ||
| Reverse: | Extension = 40 s | ||||
| BoHV5-Forward: | 159 | Annealing = 58°C | [ | ||
| BoHV1-Forward: | 354 | Extension = 30 s | |||
| BoHV1/5-Reverse: | |||||
| Forward: | 1461 | Annealing = 65°C | NA | ||
| Reverse: | Extension = 90 s | ||||
| Forward: | 649 | Annealing = 58°C | NA | ||
| Reverse: | Extension = 40 s | ||||
| Forward: | 192 | Annealing = 58°C | [ | ||
| Reverse: | Extension = 30 s | ||||
| Forward: | 702 | Annealing = 50°C | [ | ||
| Reverse: | Extension = 60 s | ||||
| Forward: | 329 | Annealing = 53°C | [ | ||
| Reverse: | Extension = 60 s | ||||
| Forward: | 503 | Annealing = 48°C | [ | ||
| Reverse: | Extension = 60 s | ||||
| Forward: | 112 | Annealing = 48°C | [ | ||
| Reverse: | Extension = 60 s |
*Primers for initial diagnostic PCR,
#Primers for BoHV1/BoHV5 differential PCR,
$ Primers for BoHV5 subtyping, s = seconds, bp = base pairs, NA = Not applicable (self-designed primers)
Fig 1Isolation and identification of the agent.
(a) Amplification of BoHV1 genome in vaginal swab. Virus was recovered from the vaginal swabs in DMEM followed by DNA extraction and PCR to amplify UL27 gene of BoHV1. (b) BoHV1/BoHV5 differential PCR. PCR was carried out to amplify UL44 gene as per the method described by Claus et al. PCR amplification of UL44 from BoHV1 (reference) and BoHV5 (sample) resulted in amplification of 354 bp and 159 bp fragments respectively. (c). Virus isolation in MDBK cells. Virus recovered from the vaginal swab was used to infect MDBK cells. Cytopathic effect was observed at 3rd blind passage. Virus-infected and mock-infected cells are shown. (d) Plaque assay. Confluent monolayers of MDBK cells were infected with 10-fold serial dilutions of the virus for 1 h at 37°C followed by replacing the medium with an agar-overlay. The plaques were visible at 5–6 dpi. The agar-overlay was removed, and the plaques were stained by 1% crystal violet. The viral titers were measured as pfu/ml.
Virus isolation, detection of viral genome and antiviral antibodies in aborted and apparently health animals.
| Animal ID | Abortion history | BoHV5 genome | Virus isolation | Antibody titre | |||
|---|---|---|---|---|---|---|---|
| (Anti-BoHV1) | (Anti-BoHV5) | ||||||
| Mahima | Yes | (+) | (+) | (+) | 64 | 32 | (+) |
| Kishori | Yes | (+) | (+) | (-) | 32 | 32 | (+) |
| Jaya | Yes | (+) | (-) | (+) | 8 | 8 | (+) |
| Kavita | No | (-) | (-) | (-) | 16 | 32 | NT |
| Kirti | No | (-) | (-) | (-) | 64 | 8 | NT |
| Kapila | No | (-) | (-) | (-) | 128 | 128 | NT |
* = Vagnal swab, NT = Not tested, (+) = Positive, (-) = Negative
Fig 2BoHV5 subtyping.
(a) Amplification of UL27 and UL54 genes of BoHV5 by multiplex PCR resulted in amplification of 534 bp and 649 bp fragments respectively. (b) Digestion of PCR products (multiplex-UL27 and UL54 genes) by BstEII resulted in amplification of 420 bp, 363 bp, 249 bp and 171 bp fragments.
Fig 3Phylogenetic analysis.
Nucleotide sequences from UL27, UL44 and UL54 genes (BoHV5//India/2018) were edited to 447, 1368 and 585 bp fragments respectively, using BioEdit version 7.0. These sequences, together with the representative nucleotide sequences of BoHV1 and BoHV5 available in the public domain (GenBank) were subjected for multiple sequence alignments. Phylogenetic analyses were conducted using MEGA X. To evaluate the evolutionary history of the strain as well as the phylogenetic relationship with different lineages, a concatemeric Neighbour-Joining method tree was generated. Test of phylogeny was performed using Maximum Composite Likelihood method and the confidence intervals were estimated by a bootstrap algorithm applying 1,000 iterations. The tree is drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree.