Literature DB >> 32320279

The importance of reporting house dust mite endotoxin abundance: impact on the lung transcriptome.

Christopher D Pascoe1,2, Aruni Jha1,2, Sujata Basu2, Thomas Mahood1,2, Amy Lee3, Sam Hinshaw3, Reza Falsafi3, Robert E W Hancock3, Neeloffer Mookherjee4,5, Andrew J Halayko1,2.   

Abstract

The abundance of lipopolysaccharide (LPS) in house dust mite (HDM) preparations is broad and mirrors the variability seen in the homes of people with asthma. LPS in commercially available stocks ranges from 31 to 5,2000 endotoxin units. The influence of vastly different LPS loads on the mechanisms that define the immune and inflammatory phenotype of HDM-challenged mice has not been defined. This aim of the study was to understand the lung phenotype of mice challenged with HDM extract containing high or low levels of LPS. Female BALB/c mice were sensitized for 2 wk with commercial HDM extract containing either high (36,000 endotoxin units; HHDM) or low (615 endotoxin units; LHDM) levels of LPS. Lung phenotype was characterized by measuring lung function, total and differential cell counts, cytokine abundance, and the lung transcriptome by RNA-sequencing. LPS levels in HDM stocks used for preclinical asthma research in mice remain poorly reported. In 2019, only 14% of papers specified LPS concentration in HDM lots. Specific differences existed in airway responsiveness between mice challenged with HHDM or LHDM. HHDM- and LHDM-induced cytokine profiles of bronchial lavage were significantly different and the lung transcriptome was differentially enriched for genes involved in DNA damage repair or cilium movement, following HHDM or LHDM challenge, respectively. The abundance of LPS in commercially available HDM influences the phenotype of allergic airways inflammation in mice. Failure to report the level of LPS in HDM extracts used in animal models of airway disease will lead to inconsistency in reproducibility and reliability of published data.

Entities:  

Keywords:  RNA-seq; asthma; endotoxin; house dust mite; lipopolysaccharide; lung

Mesh:

Substances:

Year:  2020        PMID: 32320279      PMCID: PMC7347269          DOI: 10.1152/ajplung.00103.2020

Source DB:  PubMed          Journal:  Am J Physiol Lung Cell Mol Physiol        ISSN: 1040-0605            Impact factor:   5.464


  26 in total

1.  The composition of house dust mite is critical for mucosal barrier dysfunction and allergic sensitisation.

Authors:  S Post; M C Nawijn; T L Hackett; M Baranowska; R Gras; A J M van Oosterhout; I H Heijink
Journal:  Thorax       Date:  2011-12-13       Impact factor: 9.139

Review 2.  Airway wall remodeling in asthma: from the epithelial layer to the adventitia.

Authors:  Ynuk Bossé; Peter D Paré; Chun Y Seow
Journal:  Curr Allergy Asthma Rep       Date:  2008-07       Impact factor: 4.806

3.  Proteome, Allergenome, and Novel Allergens of House Dust Mite, Dermatophagoides farinae.

Authors:  Jintarat Choopong; Onrapak Reamtong; Nitat Sookrung; Watee Seesuay; Nitaya Indrawattana; Yuwaporn Sakolvaree; Wanpen Chaicumpa; Anchalee Tungtrongchitr
Journal:  J Proteome Res       Date:  2016-01-25       Impact factor: 4.466

4.  House Dust Endotoxin Levels Are Associated with Adult Asthma in a U.S. Farming Population.

Authors:  Megan Ulmer Carnes; Jane A Hoppin; Nervana Metwali; Annah B Wyss; John L Hankinson; Elizabeth Long O'Connell; Marie Richards; Stuart Long; Laura E Beane Freeman; Dale P Sandler; Paul K Henneberger; Christie Barker-Cummings; David M Umbach; Peter S Thorne; Stephanie J London
Journal:  Ann Am Thorac Soc       Date:  2017-03

5.  Endotoxin exposure is a risk factor for asthma: the national survey of endotoxin in United States housing.

Authors:  Peter S Thorne; Katarina Kulhánková; Ming Yin; Richard Cohn; Samuel J Arbes; Darryl C Zeldin
Journal:  Am J Respir Crit Care Med       Date:  2005-09-01       Impact factor: 21.405

6.  Lipopolysaccharide inhibits Th2 lung inflammation induced by house dust mite allergens in mice.

Authors:  J Daan de Boer; Joris J T H Roelofs; Alex F de Vos; Regina de Beer; Marcel Schouten; Tijmen J Hommes; Arie J Hoogendijk; Onno J de Boer; Ingrid Stroo; Jaring S van der Zee; Cornelis Van't Veer; Tom van der Poll
Journal:  Am J Respir Cell Mol Biol       Date:  2012-12-13       Impact factor: 6.914

7.  Airway exposure levels of lipopolysaccharide determine type 1 versus type 2 experimental asthma.

Authors:  Yoon-Keun Kim; Sun-Young Oh; Seong Gyu Jeon; Heung-Woo Park; Soo-Yeon Lee; Eun-Young Chun; Boram Bang; Hyun-Seung Lee; Min-Hee Oh; You-Sun Kim; Jong-Hoon Kim; Yong Song Gho; Sang-Heon Cho; Kyung-Up Min; You-Young Kim; Zhou Zhu
Journal:  J Immunol       Date:  2007-04-15       Impact factor: 5.422

8.  Intranasal exposure of mice to house dust mite elicits allergic airway inflammation via a GM-CSF-mediated mechanism.

Authors:  Elizabeth C Cates; Ramzi Fattouh; Jennifer Wattie; Mark D Inman; Susanna Goncharova; Anthony J Coyle; José-Carlos Gutierrez-Ramos; Manel Jordana
Journal:  J Immunol       Date:  2004-11-15       Impact factor: 5.422

9.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

10.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

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  4 in total

1.  Integrating Proteomes for Lung Tissues and Lavage Reveals Pathways That Link Responses in Allergen-Challenged Mice.

Authors:  Thomas H Mahood; Christopher D Pascoe; Tobias K Karakach; Aruni Jha; Sujata Basu; Peyman Ezzati; Victor Spicer; Neeloffer Mookherjee; Andrew J Halayko
Journal:  ACS Omega       Date:  2021-01-05

2.  Comparative analysis of global transcriptome, proteome and acetylome in house dust mite-induced murine allergic asthma model.

Authors:  Yahui Liu; Qianru Huang; Juan Du; Chunrong Huang; Dan Li; Xueyu Dai; Rui Liang; Bin Li; Guochao Shi
Journal:  Clin Transl Med       Date:  2021-11

3.  Cytotoxic effects of dental prosthesis grinding dust on RAW264.7 cells.

Authors:  Wei Wang; Tianshu Li; Xue Luo; Ke Zhang; Nanjue Cao; Keda Liu; Xiaoming Li; Yuhe Zhu
Journal:  Sci Rep       Date:  2020-09-01       Impact factor: 4.379

4.  Systematic Characterization of the Group 2 House Dust Mite Allergen in Dermatophagoides microceras.

Authors:  Rei-Hsing Hu; Chia-Ta Wu; Ting-Shuan Wu; Feng-Yih Yu; Jiunn-Liang Ko; Ko-Huang Lue; Yu-Fan Liu
Journal:  Front Cell Infect Microbiol       Date:  2022-01-17       Impact factor: 5.293

  4 in total

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