Literature DB >> 32318716

Genetic Contributions to Multivariate Data-Driven Brain Networks Constructed via Source-Based Morphometry.

Amanda L Rodrigue1, Aaron F Alexander-Bloch2, Emma E M Knowles1, Samuel R Mathias1, Josephine Mollon1, Marinka M G Koenis2,3, Nora I Perrone-Bizzozero4,5, Laura Almasy6, Jessica A Turner7,8, Vince D Calhoun2,7,8,9, David C Glahn1,3.   

Abstract

Identifying genetic factors underlying neuroanatomical variation has been difficult. Traditional methods have used brain regions from predetermined parcellation schemes as phenotypes for genetic analyses, although these parcellations often do not reflect brain function and/or do not account for covariance between regions. We proposed that network-based phenotypes derived via source-based morphometry (SBM) may provide additional insight into the genetic architecture of neuroanatomy given its data-driven approach and consideration of covariance between voxels. We found that anatomical SBM networks constructed on ~ 20 000 individuals from the UK Biobank were heritable and shared functionally meaningful genetic overlap with each other. We additionally identified 27 unique genetic loci that contributed to one or more SBM networks. Both GWA and genetic correlation results indicated complex patterns of pleiotropy and polygenicity similar to other complex traits. Lastly, we found genetic overlap between a network related to the default mode and schizophrenia, a disorder commonly associated with neuroanatomic alterations.
© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  genome-wide association analysis (GWAS); genome-wide complex trait analysis (GCTA); linkage disequilibrium score regression (LDSC); source-based morphometry (SBM); structural magnetic resonance imaging (sMRI)

Mesh:

Year:  2020        PMID: 32318716      PMCID: PMC7391270          DOI: 10.1093/cercor/bhaa082

Source DB:  PubMed          Journal:  Cereb Cortex        ISSN: 1047-3211            Impact factor:   5.357


  70 in total

1.  Constrained source-based morphometry identifies structural networks associated with default mode network.

Authors:  Li Luo; Lai Xu; Rex Jung; Godfrey Pearlson; Tülay Adali; Vince D Calhoun
Journal:  Brain Connect       Date:  2012

2.  Noggin antagonizes BMP signaling to create a niche for adult neurogenesis.

Authors:  D A Lim; A D Tramontin; J M Trevejo; D G Herrera; J M García-Verdugo; A Alvarez-Buylla
Journal:  Neuron       Date:  2000-12       Impact factor: 17.173

3.  Terminal axon branching is regulated by the LKB1-NUAK1 kinase pathway via presynaptic mitochondrial capture.

Authors:  Julien Courchet; Tommy L Lewis; Sohyon Lee; Virginie Courchet; Deng-Yuan Liou; Shinichi Aizawa; Franck Polleux
Journal:  Cell       Date:  2013-06-20       Impact factor: 41.582

4.  Partitioning heritability analysis reveals a shared genetic basis of brain anatomy and schizophrenia.

Authors:  P H Lee; J T Baker; A J Holmes; N Jahanshad; T Ge; J-Y Jung; Y Cruz; D S Manoach; D P Hibar; J Faskowitz; K L McMahon; G I de Zubicaray; N G Martin; M J Wright; D Öngür; R Buckner; J Roffman; P M Thompson; J W Smoller
Journal:  Mol Psychiatry       Date:  2016-10-11       Impact factor: 15.992

5.  Common variants in psychiatric risk genes predict brain structure at birth.

Authors:  Rebecca C Knickmeyer; Jiaping Wang; Hongtu Zhu; Xiujuan Geng; Sandra Woolson; Robert M Hamer; Thomas Konneker; Weili Lin; Martin Styner; John H Gilmore
Journal:  Cereb Cortex       Date:  2013-01-02       Impact factor: 5.357

6.  Bone morphogenetic proteins induce differentiation in astrocyte lineage cells.

Authors:  J S D'Alessandro; J Yetz-Aldape; E A Wang
Journal:  Growth Factors       Date:  1994       Impact factor: 2.511

7.  Genetic architecture of subcortical brain regions: common and region-specific genetic contributions.

Authors:  M E Rentería; N K Hansell; L T Strike; K L McMahon; G I de Zubicaray; I B Hickie; P M Thompson; N G Martin; S E Medland; M J Wright
Journal:  Genes Brain Behav       Date:  2014-10-08       Impact factor: 3.449

8.  A reference panel of 64,976 haplotypes for genotype imputation.

Authors:  Shane McCarthy; Sayantan Das; Warren Kretzschmar; Olivier Delaneau; Andrew R Wood; Alexander Teumer; Hyun Min Kang; Christian Fuchsberger; Petr Danecek; Kevin Sharp; Yang Luo; Carlo Sidore; Alan Kwong; Nicholas Timpson; Seppo Koskinen; Scott Vrieze; Laura J Scott; He Zhang; Anubha Mahajan; Jan Veldink; Ulrike Peters; Carlos Pato; Cornelia M van Duijn; Christopher E Gillies; Ilaria Gandin; Massimo Mezzavilla; Arthur Gilly; Massimiliano Cocca; Michela Traglia; Andrea Angius; Jeffrey C Barrett; Dorrett Boomsma; Kari Branham; Gerome Breen; Chad M Brummett; Fabio Busonero; Harry Campbell; Andrew Chan; Sai Chen; Emily Chew; Francis S Collins; Laura J Corbin; George Davey Smith; George Dedoussis; Marcus Dorr; Aliki-Eleni Farmaki; Luigi Ferrucci; Lukas Forer; Ross M Fraser; Stacey Gabriel; Shawn Levy; Leif Groop; Tabitha Harrison; Andrew Hattersley; Oddgeir L Holmen; Kristian Hveem; Matthias Kretzler; James C Lee; Matt McGue; Thomas Meitinger; David Melzer; Josine L Min; Karen L Mohlke; John B Vincent; Matthias Nauck; Deborah Nickerson; Aarno Palotie; Michele Pato; Nicola Pirastu; Melvin McInnis; J Brent Richards; Cinzia Sala; Veikko Salomaa; David Schlessinger; Sebastian Schoenherr; P Eline Slagboom; Kerrin Small; Timothy Spector; Dwight Stambolian; Marcus Tuke; Jaakko Tuomilehto; Leonard H Van den Berg; Wouter Van Rheenen; Uwe Volker; Cisca Wijmenga; Daniela Toniolo; Eleftheria Zeggini; Paolo Gasparini; Matthew G Sampson; James F Wilson; Timothy Frayling; Paul I W de Bakker; Morris A Swertz; Steven McCarroll; Charles Kooperberg; Annelot Dekker; David Altshuler; Cristen Willer; William Iacono; Samuli Ripatti; Nicole Soranzo; Klaudia Walter; Anand Swaroop; Francesco Cucca; Carl A Anderson; Richard M Myers; Michael Boehnke; Mark I McCarthy; Richard Durbin
Journal:  Nat Genet       Date:  2016-08-22       Impact factor: 38.330

9.  Quantifying the Polygenic Architecture of the Human Cerebral Cortex: Extensive Genetic Overlap between Cortical Thickness and Surface Area.

Authors:  Dennis van der Meer; Oleksandr Frei; Tobias Kaufmann; Chi-Hua Chen; Wesley K Thompson; Kevin S O'Connell; Jennifer Monereo Sánchez; David E J Linden; Lars T Westlye; Anders M Dale; Ole A Andreassen
Journal:  Cereb Cortex       Date:  2020-09-03       Impact factor: 5.357

10.  The centrosomal E3 ubiquitin ligase FBXO31-SCF regulates neuronal morphogenesis and migration.

Authors:  Mayur Vadhvani; Nicola Schwedhelm-Domeyer; Chaitali Mukherjee; Judith Stegmüller
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

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3.  Derivation and utility of schizophrenia polygenic risk associated multimodal MRI frontotemporal network.

Authors:  Shile Qi; Jing Sui; Godfrey Pearlson; Juan Bustillo; Nora I Perrone-Bizzozero; Peter Kochunov; Jessica A Turner; Zening Fu; Wei Shao; Rongtao Jiang; Xiao Yang; Jingyu Liu; Yuhui Du; Jiayu Chen; Daoqiang Zhang; Vince D Calhoun
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