Literature DB >> 32312814

Transposable elements teach T cells new tricks.

Atma Ivancevic1,2, Edward Boyi Chuong3,2.   

Abstract

Year:  2020        PMID： 32312814      PMCID： PMC7196760          DOI： 10.1073/pnas.2004493117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  22 in total

1.  What Doesn't Kill You Makes You Stronger: Transposons as Dual Players in Chromatin Regulation and Genomic Variation.

Authors:  Michelle Percharde; Tania Sultana; Miguel Ramalho-Santos
Journal:  Bioessays       Date:  2020-02-13       Impact factor: 4.345

2.  Effects of Alu elements on global nucleosome positioning in the human genome.

Authors:  Yoshiaki Tanaka; Riu Yamashita; Yutaka Suzuki; Kenta Nakai
Journal:  BMC Genomics       Date:  2010-05-17       Impact factor: 3.969

3.  MIR retrotransposon sequences provide insulators to the human genome.

Authors:  Jianrong Wang; Cristina Vicente-García; Davide Seruggia; Eduardo Moltó; Ana Fernandez-Miñán; Ana Neto; Elbert Lee; José Luis Gómez-Skarmeta; Lluís Montoliu; Victoria V Lunyak; I King Jordan
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

Review 4.  Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution.

Authors:  Hannah K Long; Sara L Prescott; Joanna Wysocka
Journal:  Cell       Date:  2016-11-17       Impact factor: 41.582

5.  Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution.

Authors:  Mark T Romanish; Wynne M Lock; Louie N van de Lagemaat; Catherine A Dunn; Dixie L Mager
Journal:  PLoS Genet       Date:  2006-12-06       Impact factor: 5.917

6.  Widespread contribution of transposable elements to the innovation of gene regulatory networks.

Authors:  Vasavi Sundaram; Yong Cheng; Zhihai Ma; Daofeng Li; Xiaoyun Xing; Peter Edge; Michael P Snyder; Ting Wang
Journal:  Genome Res       Date:  2014-10-15       Impact factor: 9.043

7.  Transposable elements drive widespread expression of oncogenes in human cancers.

Authors:  Hyo Sik Jang; Nakul M Shah; Alan Y Du; Zea Z Dailey; Erica C Pehrsson; Paula M Godoy; David Zhang; Daofeng Li; Xiaoyun Xing; Sungsu Kim; David O'Donnell; Jeffrey I Gordon; Ting Wang
Journal:  Nat Genet       Date:  2019-03-29       Impact factor: 38.330

8.  Systematic perturbation of retroviral LTRs reveals widespread long-range effects on human gene regulation.

Authors:  Daniel R Fuentes; Tomek Swigut; Joanna Wysocka
Journal:  Elife       Date:  2018-08-02       Impact factor: 8.140

9.  Specific subfamilies of transposable elements contribute to different domains of T lymphocyte enhancers.

Authors:  Mengliang Ye; Christel Goudot; Thomas Hoyler; Benjamin Lemoine; Sebastian Amigorena; Elina Zueva
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-19       Impact factor: 11.205

10.  The epigenomic landscape of transposable elements across normal human development and anatomy.

Authors:  Erica C Pehrsson; Mayank N K Choudhary; Vasavi Sundaram; Ting Wang
Journal:  Nat Commun       Date:  2019-12-10       Impact factor: 14.919
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  4 in total

1.  Genomic features underlie the co-option of SVA transposons as cis-regulatory elements in human pluripotent stem cells.

Authors:  Samantha M Barnada; Andrew Isopi; Daniela Tejada-Martinez; Clément Goubert; Sruti Patoori; Luca Pagliaroli; Mason Tracewell; Marco Trizzino
Journal:  PLoS Genet       Date:  2022-06-15       Impact factor: 6.020

2.  Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes.

Authors:  Clayton M Small; Hope M Healey; Mark C Currey; Emily A Beck; Julian Catchen; Angela S P Lin; William A Cresko; Susan Bassham
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-22       Impact factor: 12.779

3.  Genomic properties of variably methylated retrotransposons in mouse.

Authors:  Jessica L Elmer; Amir D Hay; Noah J Kessler; Tessa M Bertozzi; Eve A C Ainscough; Anne C Ferguson-Smith
Journal:  Mob DNA       Date:  2021-02-21

4.  Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila.

Authors:  Anna Ullastres; Miriam Merenciano; Josefa González
Journal:  Genome Biol       Date:  2021-09-14       Impact factor: 13.583
  4 in total

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