Literature DB >> 32308815

Towards Reliable ARDS Clinical Decision Support: ARDS Patient Analytics with Free-text and Structured EMR Data.

Emilia Apostolova1, Amit Uppal2, Jessica E Galarraga3,4, Ioannis Koutroulis5, Tim Tschampel6, Tony Wang7, Tom Velez6.   

Abstract

In this work, we utilize a combination of free-text and structured data to build Acute Respiratory Distress Syndrome(ARDS) prediction models and ARDS phenotype clusters. We derived 'Patient Context Vectors' representing patientspecific contextual ARDS risk factors, utilizing deep-learning techniques on ICD and free-text clinical notes data. The Patient Context Vectors were combined with structured data from the first 24 hours of admission, such as vital signs and lab results, to build an ARDS patient prediction model and an ARDS patient mortality prediction model achieving AUC of 90.16 and 81.01 respectively. The ability of Patient Context Vectors to summarize patients' medical history and current conditions is also demonstrated by the automatic clustering of ARDS patients into clinically meaningful phenotypes based on comorbidities, patient history, and presenting conditions. To our knowledge, this is the first study to successfully combine free-text and structured data, without any manual patient risk factor curation, to build real-time ARDS prediction models. ©2019 AMIA - All rights reserved.

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Year:  2020        PMID: 32308815      PMCID: PMC7153087     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  34 in total

1.  Subphenotypes in acute respiratory distress syndrome: latent class analysis of data from two randomised controlled trials.

Authors:  Carolyn S Calfee; Kevin Delucchi; Polly E Parsons; B Taylor Thompson; Lorraine B Ware; Michael A Matthay
Journal:  Lancet Respir Med       Date:  2014-05-19       Impact factor: 30.700

2.  An expanded definition of the adult respiratory distress syndrome.

Authors:  J F Murray; M A Matthay; J M Luce; M R Flick
Journal:  Am Rev Respir Dis       Date:  1988-09

3.  Measuring diagnoses: ICD code accuracy.

Authors:  Kimberly J O'Malley; Karon F Cook; Matt D Price; Kimberly Raiford Wildes; John F Hurdle; Carol M Ashton
Journal:  Health Serv Res       Date:  2005-10       Impact factor: 3.402

Review 4.  Clinical and biological heterogeneity in acute respiratory distress syndrome: direct versus indirect lung injury.

Authors:  Ciara M Shaver; Julie A Bastarache
Journal:  Clin Chest Med       Date:  2014-09-23       Impact factor: 2.878

5.  Alarm fatigue: a patient safety concern.

Authors:  Sue Sendelbach; Marjorie Funk
Journal:  AACN Adv Crit Care       Date:  2013 Oct-Dec

Review 6.  Deep EHR: A Survey of Recent Advances in Deep Learning Techniques for Electronic Health Record (EHR) Analysis.

Authors:  Benjamin Shickel; Patrick James Tighe; Azra Bihorac; Parisa Rashidi
Journal:  IEEE J Biomed Health Inform       Date:  2017-10-27       Impact factor: 5.772

7.  Mortality rates and prognostic variables in children with adult respiratory distress syndrome.

Authors:  O D Timmons; J M Dean; D D Vernon
Journal:  J Pediatr       Date:  1991-12       Impact factor: 4.406

8.  Early acute lung injury: criteria for identifying lung injury prior to the need for positive pressure ventilation*.

Authors:  Joseph E Levitt; Carolyn S Calfee; Benjamin A Goldstein; Rosemary Vojnik; Michael A Matthay
Journal:  Crit Care Med       Date:  2013-08       Impact factor: 7.598

Review 9.  Extracting information from the text of electronic medical records to improve case detection: a systematic review.

Authors:  Elizabeth Ford; John A Carroll; Helen E Smith; Donia Scott; Jackie A Cassell
Journal:  J Am Med Inform Assoc       Date:  2016-02-05       Impact factor: 4.497

10.  Learning Low-Dimensional Representations of Medical Concepts.

Authors:  Youngduck Choi; Chill Yi-I Chiu; David Sontag
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2016-07-20
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  2 in total

1.  Identifying ARDS using the Hierarchical Attention Network with Sentence Objectives Framework.

Authors:  Kevin Lybarger; Linzee Mabrey; Matthew Thau; Pavan K Bhatraju; Mark Wurfel; Meliha Yetisgen
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

2.  Lung-Protective Ventilation Over 6 Years at a Large Academic Medical Center: An Evaluation of Trends, Adherence, and Perceptions of Benefit.

Authors:  Catherine A Gao; Frederick M Howard; Jonathan M Siner; Thomas D Candido; Lauren E Ferrante
Journal:  Crit Care Explor       Date:  2021-01-08
  2 in total

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