Literature DB >> 32304321

Temporal changes in microbial communities attached to forages with different lignocellulosic compositions in cattle rumen.

Javad Gharechahi1, Mohammad Farhad Vahidi2, Xue-Zhi Ding3, Jian-Lin Han4,5, Ghasem Hosseini Salekdeh2,6.   

Abstract

The attachment of rumen microbes to feed particles is critical to feed fermentation, degradation and digestion. However, the extent to which the physicochemical properties of feeds influence the colonization by rumen microbes is still unclear. We hypothesized that rumen microbial communities may have differential preferences for attachments to feeds with varying lignocellulose properties. To this end, the structure and composition of microbial communities attached to six common forages with different lignocellulosic compositions were analyzed following in situ rumen incubation in male Taleshi cattle. The results showed that differences in lignocellulosic compositions significantly affected the inter-sample diversity of forage-attached microbial communities in the first 24 h of rumen incubation, during which the highest dry matter degradation was achieved. However, extension of the incubation to 96 h resulted in the development of more uniform microbial communities across the forages. Fibrobacteres were significantly overrepresented in the bacterial communities attached to the forages with the highest neutral detergent fiber contents. Ruminococcus tended to attach to the forages with low acid detergent lignin contents. The extent of dry matter fermentation was significantly correlated with the populations of Fibrobacteraceae, unclassified Bacteroidales, Ruminococcaceae and Spirochaetacea. Our findings suggested that lignocellulosic compositions, and more specifically the cellulose components, significantly affected the microbial attachment to and thus the final digestion of the forages. © FEMS 2020.

Entities:  

Keywords:  16S rRNA gene sequencing; biomass degradation; microbiome; microbiota; rumen; rumen fermentation; rumen incubation

Year:  2020        PMID: 32304321     DOI: 10.1093/femsec/fiaa069

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  13 in total

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4.  Metagenomic analysis reveals a dynamic microbiome with diversified adaptive functions to utilize high lignocellulosic forages in the cattle rumen.

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5.  Diversity of microbes colonizing forages of varying lignocellulose properties in the sheep rumen.

Authors:  Mohammad Farhad Vahidi; Javad Gharechahi; Mehrdad Behmanesh; Xue-Zhi Ding; Jian-Lin Han; Ghasem Hosseini Salekdeh
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Authors:  Yulin Ma; Xu Chen; Muhammad Zahoor Khan; Jianxin Xiao; Zhijun Cao
Journal:  Front Microbiol       Date:  2022-07-14       Impact factor: 6.064

10.  MCIC: Automated Identification of Cellulases From Metagenomic Data and Characterization Based on Temperature and pH Dependence.

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Journal:  Front Microbiol       Date:  2020-10-23       Impact factor: 5.640

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