| Literature DB >> 32281724 |
Jin-Yu Sun1, Xiao-Yu Zhang2, Yi-Zhi Cao1, Xiao Zhou3, Jian Gu3, Xiao-Xin Mu3.
Abstract
Hepatocellular carcinoma (HCC) is the sixth most common malignant tumour, which has posed a heavy health and financial burden worldwide. Due to limited symptoms at the early stage and the limitation in current biomarkers, HCC patients are usually diagnosed at the advanced stage with a pessimistic overall survival rate. Circular RNAs (circRNAs) are a subclass of single-stranded RNAs characterized by a covalently closed loop structure without 3'- or 5'-end. With advances in high-throughput sequencing technology and bioinformatics, accumulating studies have demonstrated the promotor or suppressor roles of circRNAs in the carcinogenesis, progression, and metastasis of HCC. Moreover, circRNAs are characteristic of higher abundance, stability and conservation compared with linear RNAs. Therefore, circRNAs have emerged as one of the most promising diagnostic and prognostic biomarkers for HCC with reliable accuracy, sensitivity and specificity. In this review, we briefly introduce the characteristics of circRNAs and summarize the roles of circRNAs in the biological procedures of HCC. Furthermore, we provide an overview on the potential diagnostic and prognostic value of circRNAs as biomarkers for patients with HCC. Finally, we discuss future perspectives of circRNAs in cancer research.Entities:
Keywords: circular RNAs; diagnostic biomarker; hepatocellular carcinoma; prognostic biomarker
Year: 2020 PMID: 32281724 PMCID: PMC7214155 DOI: 10.1111/jcmm.15258
Source DB: PubMed Journal: J Cell Mol Med ISSN: 1582-1838 Impact factor: 5.310
Figure 1The biogenesis of circRNAs. CircRNAs are single‐stranded transcripts arising from exons (ecircRNAs), introns (ciRNAs), or both exons and introns (EIciRNAs)
Recent studies on the regulating effect of circRNAs in HCC
| circBase ID (Alias) | Alteration | Target | Function | Ref. |
|---|---|---|---|---|
| hsa_circ_0001946 (Cdr1as/ciRS‐7) | ↑ | miR‐7 | Oncogene |
|
| hsa_circRNA_101368 | ↑ | HMGB1/RAGE | Modulate the migration of HCC |
|
| Circ‐CDYL | ↑ | miR‐892a and miR‐328‐3p | Oncogene |
|
| hsa_circRNA‐104718 | ↑ | miR‐218‐5p/TXNDC5 | Promote HCC progression |
|
| hsa_circ_0067934 | ↑ | miR‐1324/FZD5/Wnt/β‐catenin | Promote tumour growth and metastasis |
|
| hsa_circ_0015756 | ↑ | miR‐7 | Promote proliferation, invasion and migration |
|
| hsa_circ_0020007 (circ‐ADD3) | ↓ | EZH2 | Inhibit HCC metastasis |
|
| hsa_circ_0001445 (cSMARCA5) | ↓ | miR‐17‐3p and miR‐181b‐5p | Inhibit growth and metastasis in HCC |
|
| hsa_circ_0000284 (circHIPK3) | ↑ | miR‐124 | Regulate cell proliferation and migration |
|
| hsa_circ_0000567 (circSETD3) | ↓ | miR‐421 | Inhibit the proliferation of HCC cells |
|
| hsa_circ_0000847 (circSMAD2) | ↓ | miR‐629 | Inhibit the migration and epithelial‐mesenchymal transition of HCC cells. |
|
| hsa_circ_0016788 | ↑ | miR‐486/CDK4 | Oncogene |
|
| hsa_circ_0128298 | ↑ | ‐ | Promote proliferation and metastasis |
|
| hsa_circ_0001727 (circZKSCAN1) | ↓ | Multiple cancer‐related signalling pathways | Inhibit HCC cell growth, migration and invasion |
|
| hsa_circ_0007144 (circPTPRM) | ↑ | ‐ | Promote proliferation and migration |
|
| hsa_circRNA8662‐12 (circTRIM33‐12) | ↓ | miR‐191 | Inhibit HCC proliferation, metastasis and immune evasion |
|
| hsa_circ_0002768 (circRNA‐MYLK) | ↑ | miR‐362‐3p | Promote the proliferation, invasion and migration |
|
| hsa_circRNA_102034 (circRHOT1) | ↑ | NR2F6 | Promote HCC growth and metastasis |
|
| hsa_circRNA_103809 | ↑ | miR‐377‐3p | Promote the proliferation, cycle progression and migration of HCC cells |
|
| hsa_circ_0001649 | ↓ | miR‐127‐5p, miR‐612 and miR‐4688 | Inhibit proliferation and migration of HCC |
|
| hsa_circ_001013 (circHIAT1) | ↓ | miR‐3171 | Inhibit the growth of HCC cells |
|
| Circβ‐catenin | ↑ | Wnt pathway | Promote HCC development |
|
| hsa_circ_0000267 | ↑ | miR‐646 | Facilitate cell growth, migration and invasion |
|
| hsa_circ_0008450 | ↑ | miR‐548p | Promote cell viability, migration and invasion |
|
| CircADAMTS13 | ↓ | miR‐484 | Suppress cell proliferation |
|
| hsa_circRNA_104075 | ↑ | miR‐582‐3p | Promote HCC development |
|
| hsa_circ_0018665 (circADAMTS14) | ↓ | miR‐572 | Inhibit tumour growth |
|
| hsa_circ_101280 | ↑ | miR‐375 | Promote HCC |
|
| hsa_circ_0016788 | ↑ | miR‐486 | Promote the proliferation, invasion and inhibit the apoptosis |
|
| Circ‐FOXP1 | ↑ | miR‐875‐3p and miR‐421 | Promote HCC progression |
|
| hsa‐circ‐0046600 | ↑ | miR‐640/HIF‐1α | Promote HCC progression |
|
Abbreviations: ‐, not provided; ↑, Up‐regulated; ↓, Down‐regulated; HCC, hepatocellular carcinoma.
Recent studies on circRNAs as diagnostic biomarkers of HCC
| circBase ID (Alias) | Gene symbol | Genomic position | AUC | Sensitivity (%) | Specificity (%) | Ref. |
|---|---|---|---|---|---|---|
| Circ‐CDYL, plus HDGF and HIF1AN | ‐ | ‐ | 0.73 | 75.4 | 66.67 |
|
| hsa_circ_001565 | B4GALT2 | chr1:44446997‐44447136 | ‐ | 73.5 | 82.29 |
|
| hsa_circ_000224 | C17orf107 | chr17:4803230‐4803902 | ‐ | 95.6 | 92.7 |
|
| hsa_circ_000520 | VIM | chr10:17271723‐17271867 | ‐ | 97.1 | 89.6 |
|
| hsa_circ_0016788 | TRIM11 | chr1:228581376‐228594517 | 0.851 | ‐ | ‐ |
|
| hsa_circ_0128298 | SPINK1 | chr5:147210311‐147211162 | 0.668 | 71.6 | 81.5 |
|
| hsa_circ_0001727 (CirZKSCAN1) | ZKSCAN1 | chr7:99621041‐99621930 | 0.834 | 82.2 | 72.4 |
|
| hsa_circ_0000976, plus hsa_circ_0007750 and hsa_circ_0139897 | HPCAL1, RABGGTA, and MTM1, respectively | chr2:10559859‐10560261, chr14:24735635‐24737825, and chrX:149761066‐149787612, respectively | 0.843 | 87.5 | 81.2 |
|
| hsa_circRNA_104075 | NUP153 | chr6:17669524‐17669777 | 0.973 | 96.0 | 98.3 |
|
| hsa_circ_0005075 | EIF4G3 | chr1:21377358‐21415706 | 0.94 | 83.3 | 90.0 |
|
| hsa_circ_0028502 | SLC24A6 | chr12:113753139‐113754806 | 0.675 | 72.1 | 58.0 |
|
| hsa_circ_0076251 | ZFAND3 | chr6:38050167‐38084515 | 0.738 | 71.3 | 64.0 |
|
| hsa_circ_0027089 | PTGES3 | chr12:57059987‐57064148 | 0.784 | 57.8 | 84.8 |
|
| hsa_circ_0003998 | ARFGEF2 | chr20:47570092‐47580435 | 0.894 | 84.0 | 80.0 |
|
Abbreviations: ‐, not provided; AUC, area under the curve.
Recent studies on circRNAs as prognostic biomarkers of HCC
| circBase ID (Alias) | Gene symbol | Genomic position | Prognosis | Univariate analysis | Multivariate analysis | Ref. | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| HR | 95% CI |
| HR | 95% CI |
| |||||
| hsa_circ_0001445 (cSMARCA5) | SMARCA5 | chr4:144464661‐144465125 | OS | ‐ | ‐ | <.001 | 2.47 | 1.46‐4.18 | .001 |
|
| RFS | ‐ | ‐ | .001 | 1.67 | 1.08‐2.59 | .021 |
| |||
| hsa_circ_0001946 (Cdr1as/ciRS‐7) | CDR1 | chrX:139865339‐139866824 | MVI | 2.65 | 1.06‐6.63 | .037 | 4.08 | 1.06‐15.74 | .041 |
|
| hsa_circ_0128298 |
| chr5:147210311‐147211162 | OS | 1.98 | 1.34‐3.02 | .009 | 6.66 | 2.66‐8.42 | .014 |
|
| hsa_circRNA8662‐12 (circTRIM33‐12) | ‐ | ‐ | OS | ‐ | ‐ | .001 | 0.50 | 0.93‐1.94 | .007 |
|
| hsa_circ_0001727 (circZKSCAN1) | ZKSCAN1 | chr7:99621041‐99621930 | OS | 0.09 | 10.04‐0.19 | <.001 | 0.10 | 0.05‐0.23 | <.001 |
|
| RFS | 0.22 | 0.12‐0.41 | <.001 | 0.22 | 0.11‐0.42 | <.001 |
| |||
| hsa_circ_0000267 | FAM53B | chr10:126370175‐126370948 | OS | 2.64 | 1.43‐4.87 | .002 | 2.11 | 1.09‐4.06 | .025 |
|
| Hsa_circ_0076251 | ZFAND3 | chr6:38050167‐38084515 | OS | 0.46 | 0.22‐0.98 | <.05 | ‐ | ‐ | ‐ |
|
| Hsa_circ_0003998 | ARFGEF2 | chr20:47570092‐47580435 | OS | 0.60 | 0.42‐0.86 | .006 | 0.58 | 0.41‐0.84 | .003 |
|
Abbreviations: ‐, not provided; CI, concordance index; HR, hazard ratios; MVI, microvascular invasion; OS, overall survival; RFS, relapse‐free survival.