LncRNA MORT Inhibits Cancer Cell Proliferation and Promotes Apoptosis in Mantle Cell Lymphoma by Upregulating miRNA-16.

INTRODUCTION: LncRNA mortal obligate RNA transcript (MORT) is downregulated in different types of cancer, indicating its involvement in cancer biology.
METHODS: In this study, MORT and miRNA-16 were both downregulated in plasma of mantle cell lymphoma (MCL) patients than that in the controls. The low levels of MORT and miRNA-16 were correlated with poor survival of MCL patients. The expression of MORT and miRNA-16 was positively correlated only in MCL patients.
RESULTS: Overexpression of MORT and miRNA-16 suppressed cell proliferation but promoted cancer cell apoptosis, while miRNA-16 inhibitor reduced the effects of MORT overexpression. Overexpression of MORT led to upregulated expression of miRNA-16, while overexpression of miRNA-16 had no effect on the expression of MORT.
CONCLUSION: Therefore, MORT may inhibit cancer cell proliferation and promote apoptosis in mantle cell lymphoma by upregulating miRNA-16.

Introduction

As a subtype of non-Hodgkin lymphoma, mantle cell lymphoma (MCL) is characterized by the proliferation of CD5-expressing mature B lymphocytes.1,2 With the development of anti-cancer therapies, the overall survival rate of MCL patients has been significantly increased.3 However, although most patients respond well to the initial treatment, recurrence and the development of radio- or chemo-resistance is common, resulting in failure of the treatment.2 In addition, the relatively low early diagnosis rate of MCL is another major challenge of survival.4,5 More than 70% of MCL patients were diagnosed at stage IV, which is the end stage of this disease.4,5 At present, early diagnosis is still the key to the treatment of MCL.

Long non-coding RNAs (lncRNAs) are key regulators involved in human diseases.6 It has been well established that the development of MCL is accompanied by changes in expression patterns of a large set of lncRNAs.7 A recent study working on the gene expression data collected by The Cancer Genome Atlas (TCGA) revealed that MORT was downregulated in 16 types of cancer.8 However, the expression pattern of MORT in MCL is unknown. We reported that MORT was also downregulated in MCL and its overexpression inhibited MCL cell proliferation and promoted MCL cell apoptosis possibly by upregulating miRNA-16, which is a well-established tumor suppressor miRNA in different types of cancers.9,10

Materials and Methods

Patients and Cell Lines

A total of 48 patients with MCL (28 males and 20 females, 26 to 67 years old, mean age 45.3 ± 4.7 years old) and 42 healthy volunteers (24 males and 18 females, 29 to 63 years old, mean age 44.1 ± 5.2 years old) were enrolled in this study. These participants were admitted by the First Affiliated Hospital of Chongqing Medical University from May 2013 to March 2018. Inclusion criteria of MCL patients: 1) patients at stage I or II; 2) newly diagnosed cases. Exclusion criteria of MCL patients: 1) patients who were suffering from other diseases; 2) patients who were treated within 3 months before admission. The 48 MCL patients included 18 cases at stage I and 30 cases at stage II. Distributions of age and gender were not significantly different between MCL and the control group. Informed consent was signed by all participants. Blood was extracted from each participant 1 day after admission. Plasma was prepared using conventional method. This study was approved by the ethics committee of the First Affiliated Hospital of Chongqing Medical University. Two human MCL cell lines, JVM-2 and Z-138, were used in this study. Cells of these two cell lines were purchased from ATCC (Manassas, VA, USA). Cells were cultured following the instructions provided by ATCC.

Isolation of B Lymphocytes

Using the same blood samples (both MCL patients and healthy controls) collected, B lymphocytes were isolated using CD19+ magnetic beads and the cells were released using DETACHaBEAD CD19 (Invitrogen). Samples with the purify and/or viability below 95% were selected for use.

Total RNA Extractions and qPCR

To detect the expression of MORT, total RNAs from 105 cells and 0.4 mL plasma were extracted using Ribozol (Sigma-Aldrich, USA). cDNAs were synthesized using qScript MicroRNA cDNA Synthesis Kit (Genbiotech SRL). The qPCR mixtures were prepared using qScript One-Step RT-qPCR Kit (Quantabio, Beverly, MA). To detect the expression of miRNA-16, miRNAs were extracted using mirPremier microRNA Isolation Kit (SNC10, Sigma-Aldrich). Reverse transcription was performed using TaqMan MicroRNA Reverse Transcription Kit (Thermo Fisher Scientific). PCR reaction systems were prepared using mirVana qRT-PCR miRNA Detection Kit (Thermo Fisher Scientific). The qPCR mixtures were prepared following the manufacturer’s instruction. All PCR reactions were performed on the StepOne Real-Time PCR System (Thermo Fisher Scientific). Reaction conditions were: 95°C for 1 min, followed by 40 cycles of 95°C for 20 s and 57.0°C for 35 s. Ct values were calculated using the 2−ΔΔCT method. Expression levels of MORT and Caspase-3 mRNA were normalized to GAPDH endogenous control (18S rRNA was also used as an endogenous control and similar results were obtained). Expression level of miRNA-16 was normalized to U6 endogenous control. Primer sequences used were: 5ʹ-TGCTATCTTAACCATGTTGAA-3ʹ (forward) and 5ʹ-AGCTAGGAGCAGAGGGGCTG-3ʹ (reverse) for MORT; 5ʹ-GCAGCAAACCTCAGGGAAAC-3ʹ (forward) and 5ʹ-TGTCGGCATACTGTTTCAGC-3ʹ (reverse) for Caspase-3; 5ʹ-GTCTCCTCTGACTTCAACAGC-3ʹ (forward) and 5ʹ-ACCACCCTGTTGCTGTAGCC-3ʹ (reverse) for GAPDH. Forward primer of miR-16 was 5ʹ-CTAGCCTGCAGGGATCTAGGA-3ʹ. Reverse primers of U6 and miR-16 were included in the kit.

Cell Transfection

MORT expressing vector (pcRNA3.1) was purchased from Sangon (Shanghai, China). Negative control (NC) miRNA and miR-16 mimic, as well as miRNA-16 inhibitor and inhibitor NC were purchased from Sigma-Aldrich. Lipofectamine 2000 reagent (Invitrogen) was used to transfect 10 nM vector (empty vector as NC group), or 50 nM miRNAs (NC miRNA as NC group) or 50 nM miRNA inhibitor (inhibitor NC as NC group) into 106 cells. Untransfected cells were used as control (C). Cells harvested at 24 h post-transfection were used to perform subsequent experiments.

Cell Apoptosis Assay

Cells were harvested and cell pellets containing 5 ×104 cells were resuspended in 1 mL non-serum medium. Cells were then cultivated in 6-well plates (2 mL per well). Annexin V-FITC (Dojindo, Japan) and propidium iodide staining were performed after 48 h of cultivation. Apoptotic cells were detected by flow cytometry using BD Biosciences 2 Laser 4 Color FacsCalibur w/HTS.

CCK-8 Assay for Cell Proliferation

Cells were harvested and cell pellets containing 5 ×104 cells were resuspended in 1 mL culture medium containing 10% FBS. Cells were cultivated in 96-well plates (0.1 mL per well). CCK-8 solution (10 µL) was added 4 h before the end of cell culture. OD values at 450 nm wavelength were measured to reflect cell proliferation.

Statistical Analysis

Values of mean ± standard deviation were calculated using the data from 3 replicate experiments. All statistical analyses were performed using GraphPad Prism 6 software. Unpaired t test was used to explore differences between 2 groups. One-way ANOVA and Tukey’s test were used to explore difference among multiple groups. Diagnostic values of MORT and miRNA-16 for MCL were analyzed by ROC curve. In ROC curve, true positive cases were MCL patients and true negative cases were healthy controls. Pearson’s correlation coefficient was used to analyze the correlations between plasma levels of MORT and miRNA-16. p < 0.05 was statistically significant.

Results

MORT and miRNA-16 Were Both Downregulated in Early Stage MCL Patients

Expression levels of MORT and miRNA-16 in plasma samples of 48 patients with early-stage MCL and 42 healthy volunteers were detected by qPCR. As shown in Figure 1, compared to the controls, expression levels of MORT (Figure 1A) and miRNA-16 (Figure 1B) were significantly lower in patients with early-stage MCL (p < 0.05).

Figure 1

MORT and miRNA-16 were both downregulated in early-stage MCL patients. Expression levels of MORT (A) and miRNA-16 (B) were significantly lower in patients with early-stage MCL than that in healthy controls (*p < 0.05).

Dysregulated Plasma MORT and miRNA-16 Indicated an Application Potential in the Early Diagnosis of MCL

ROC curve analysis was performed and as shown in Figure 2, the area under the curve (AUC) was 0.8916 (standard error: 0.03241; 95% confidence interval: 0.8281–0.9552; p < 0.0001). For plasma miRNA-16 expression, AUC was 0.9256 (standard error: 0.02522; 95% confidence interval: 0.8762–0.9750; p < 0.0001).

Figure 2

Dysregulated plasma MORT and miRNA-16 indicated an application potential in the early diagnosis of MCL. ROC curve analysis showed that dysregulated plasma MORT (A) and miRNA-16 (B) distinguished early-stage MCL patients from healthy controls.

Expression of MORT and miRNA-16 Were Positively Correlated in MCL Patients

Pearson’s correlation coefficient results showed a positive and significant correlation between the expression of MORT and miRNA-16 in MCL patients (Figure 3A). In contrast, expression levels of MORT and miRNA-16 were not significantly correlated in healthy controls (Figure 3B). Besides, the correlation between expression levels of MORT in plasma and B lymphocytes was analyzed as well. It was observed that plasma levels of MORT expression were significantly correlated with its expression levels in B lymphocytes (Figure 3C).

Figure 3

Expression of MORT and miRNA-16 was positively correlated only in MCL patients. Pearson’s correlation coefficient revealed a positive and significant correlation between plasma levels of MORT and miRNA-16 in MCL patients (A) but not in healthy controls (B). Plasma levels of MORT were significantly correlated with its expression levels in B lymphocytes (C).

MORT Is a Potential Positive Regulator Upstream of miRNA-16 in MCL

After transfection, overexpression rates of both MORT and miRNA-16 reached to 180−220% at 24 h (data not shown). Compared with the control (C) and negative control (NC) cells, increased expression levels of miRNA-16 were observed in both JVM-2 and Z-138 cell lines (Figure 4A, p < 0.05). However, no significant changes in expression levels of MORT were observed in these two cell lines after overexpression of miRNA-16 (Figure 4B, p > 0.05).

Figure 4

MORT is a potential positive regulator upstream of miRNA-16 in MCL. Overexpression of MORT led to increased expression levels of miRNA-16 in both JVM-2 and Z-138 cell lines (A). Overexpression of miRNA-16 showed no significant effects on MORT expression in both JVM-2 and Z-138 cell lines (B) (*p > 0.05).

MORT Promoted Cancer Cell Apoptosis and Inhibited Cancer Cell Proliferation Through miRNA-16

Cell apoptosis assay and cell proliferation assay revealed that compared with the control (C) and negative control (NC) cells, overexpression of MORT and miRNA-16 significantly promoted cancer cell apoptosis (Figure 5A) and inhibited cancer cell proliferation (Figure 5B) (p < 0.05). In contrast, treatment with miRNA-16 inhibitor significantly inhibited cancer cell apoptosis (Figure 5A) and promoted cancer cell proliferation (Figure 5B) (p < 0.05). In addition, treatment with miRNA-16 inhibitor reduced the effects of overexpressing MORT on cancer cell apoptosis (Figure 5A) and proliferation (Figure 5B) (p < 0.05). It was also observed that overexpression of MORT and miRNA-16 significantly promoted the expression of caspase 3 in both JVM-2 (Figure 6A) and Z-138 (Figure 6B) cell lines (p < 0.05). MiRNA-16 inhibitor played an opposite role and reduced the effects of overexpressing MORT (p < 0.05).

Figure 5

MORT promoted cancer cell apoptosis and inhibited cancer cell proliferation possibly through miRNA-16. Overexpression of MORT and miRNA-16 significantly promoted cancer cell apoptosis (A) and inhibited cancer cell proliferation (B). Treatment with miRNA-16 inhibitor played an opposite role. Treatment with miRNA-16 inhibitor significantly attenuated the effects of overexpressing MORT on cancer cell apoptosis and proliferation (*p < 0.05).

Figure 6

MORT promoted the expression of Caspase-3 through miRNA-16. The effects of transfections on the expression of Caspase-3 in JVM-2 (A) and Z-138 (B) cell lines analyzed by qPCR. Experiments were performed in triplicate manner and mean values were presented. (*p < 0.05).

Discussion

The key finding of the present study is that MORT was downregulated in MCL and the downregulation of MORT may assist the early diagnosis of MCL. We also provided experimental evidences that overexpression of MORT may provide novel insight into clinical treatment of MCL.

MiRNA-16 is a well-established tumor suppressor miRNA in different types of human malignancy. Downregulation of miRNA-16 has been observed in oral squamous carcinoma and multiple myeloma.9,10 Overexpression of miRNA-16 inhibited tumor growth in oral squamous carcinoma by targeting Wnt/β-catenin signaling pathway. In addition to the direct roles in cancer development and progression, miRNA-16 also participates in the development of drug resistance of cancer treatment.11 Our study reported the downregulation of miRNA-16 in MCL. In effect, downregulation of miRNA-16 effectively distinguished early-stage MCL patients from healthy controls. The in vitro cell experiments also showed that miRNA-16 could inhibit tumor cell proliferation and promote cell apoptosis in MCL. Therefore, miRNA-16 functions as a tumor suppressor miRNA in MCL.

The development of MCL also involves the regulations of lncRNAs.7 MCL-related lncRNAs regulate cancer cell behaviors through the interactions with multiple pathways.12 Our study is the first to report the downregulation of MORT in MCL. The in vitro cell experiments also demonstrated that MORT acts as a tumor suppressor in MCL by regulating cancer cell proliferation and apoptosis. Our data suggest that overexpression of MORT could improve the conditions of MCL. However, more clinical trials and in vivo experiments are needed to further confirm this conclusion.

The crosstalk between miRNAs and lncRNAs in cancer biology has been extensively reported in previous studies.13–15 Our study first revealed the interactions between MORT and miRNA-16 in MCL. Overexpression and inhibition experiments using MCL cell lines also showed that MORT was likely a positive regulator upstream of miRNA-16. Our study provided new insights into the pathogenesis of MCL.

It is worth noting that the interaction between MORT and miRNA-16 is likely indirect due to the lack of obvious correlation between these two factors in healthy people. Therefore, the future direction of our study is to identify the pathological factors that mediate the interactions between MORT and miRNA-16.

In conclusion, MORT is downregulated in MCL and overexpression of MORT could inhibit MCL cell proliferation and promote MCL cell apoptosis possibly by upregulating miRNA-16.