Literature DB >> 32271585

Amyloid Formation of α-Synuclein Based on the Solubility- and Supersaturation-Dependent Mechanism.

Maya Sawada1, Keiichi Yamaguchi1, Miki Hirano1, Masahiro Noji1, Masatomo So1, Daniel Otzen2, Yasushi Kawata3, Yuji Goto1.   

Abstract

Amyloid fibrils are formed by denatured proteins when the supersaturation of denatured proteins is broken by agitation, such as ultrasonication, or by seeding, although the detailed mechanism of how solubility and supersaturation regulate amyloid formation remains unclear. To further understand the mechanism of amyloid formation, we examined α-synuclein (α-syn) amyloid formation at varying concentrations of SDS, LPA, heparin, or NaCl at pH 7.5. Amyloid fibrils were formed below or around the critical micelle concentrations (CMCs) of SDS (2.75 mM) and LPA (0.24 mM), although no fibrils were formed above the CMCs. On the other hand, amyloid fibrils were formed with 0.01-2.5 mg/mL of heparin and 0.5-1.0 M NaCl, and amyloid formation was gradually suppressed at higher concentrations of heparin and NaCl. To reproduce these concentration-dependent effects of additives, we constructed two models: (i) the ligand-binding-dependent solubility-modulation model and (ii) the cosolute-dependent direct solubility-modulation model, both of which were used by Tanford and colleagues to analyze the additive-dependent conformational transitions of proteins. The solubility of α-syn was assumed to vary depending on the concentration of additives either by the decreased solubility of the additive-α-syn complex (model i) or by the direct regulation of α-syn solubility (model ii). Both models well reproduced additive-dependent bell-shaped profiles of acceleration and inhibition observed for SDS and LPA. As for heparin and NaCl, participation of amorphous aggregates at high concentrations of additives was suggested. The models confirmed that solubility and supersaturation play major roles in driving amyloid formation in vitro, furthering our understanding of the pathogenesis of amyloidosis in vivo.

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Year:  2020        PMID: 32271585     DOI: 10.1021/acs.langmuir.0c00426

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  5 in total

1.  Multi-platform quantitation of alpha-synuclein human brain proteoforms suggests disease-specific biochemical profiles of synucleinopathies.

Authors:  Tim E Moors; Daniel Mona; Stefan Luehe; Gonzalo Duran-Pacheco; Liz Spycher; Olaf Mundigl; Klaus Kaluza; Sylwia Huber; Melanie N Hug; Thomas Kremer; Mirko Ritter; Sebastian Dziadek; Gregor Dernick; Wilma D J van de Berg; Markus Britschgi
Journal:  Acta Neuropathol Commun       Date:  2022-06-03       Impact factor: 7.578

Review 2.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

3.  Polyphosphates induce amyloid fibril formation of α-synuclein in concentration-dependent distinct manners.

Authors:  Keiichi Yamaguchi; Masatomo So; César Aguirre; Kensuke Ikenaka; Hideki Mochizuki; Yasushi Kawata; Yuji Goto
Journal:  J Biol Chem       Date:  2021-03-04       Impact factor: 5.157

Review 4.  Supersaturation-Dependent Formation of Amyloid Fibrils.

Authors:  Yuji Goto; Masahiro Noji; Kichitaro Nakajima; Keiichi Yamaguchi
Journal:  Molecules       Date:  2022-07-19       Impact factor: 4.927

5.  Polyphenol-solubility alters amyloid fibril formation of α-synuclein.

Authors:  Masatomo So; Yuto Kimura; Keiichi Yamaguchi; Toshihiko Sugiki; Toshimichi Fujiwara; Cesar Aguirre; Kensuke Ikenaka; Hideki Mochizuki; Yasushi Kawata; Yuji Goto
Journal:  Protein Sci       Date:  2021-06-02       Impact factor: 6.993

  5 in total

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