| Literature DB >> 32266003 |
Faisal Adnan1, Najeeb Ullah Khan1, Aqib Iqbal1, Ijaz Ali2, Arnolfo Petruzziello3, Rocco Sabatino4, Annunziata Guzzo5, Giovanna Loquercio6, Gerardo Botti7, Sanaullah Khan8, Muhammad Naeem9, Muhammad Ismail Khan10.
Abstract
Hepatocellular carcinoma is a primary liver malignancy in which the risk of development is always multifunctional. Interleukin-6 is a proinflammatory and multifunctional cytokine, which plays an important role in the immune response, haematopoiesis and defence against viral infection. We aimed to evaluate the frequency of Interleukin-6 mutations (rs2069837 and rs17147230) associated with genetic risk of hepatocellular carcinoma in Khyber Pakthunkhwa population. A total of 72 hepatocellular carcinoma cases and 38 controls were included in this study. The genomic DNA was extracted from the peripheral blood cells and Interleukin-6 genotyping was performed using T-ARMS-PCR technique. Our results show a significant increase risk of developing hepatocellular carcinoma with the mutation within Interleukin-6 gene with heterozygous G allele (rs2069837) (OR = 10.667, 95%CI = 3.923-29.001, p = < 0.0001) and heterozygous T allele (rs17147230) (OR = 75.385, 95%CI = 9.797-580.065, p = < 0.0001). However, under recessive gene model the results were insignificant in case of Interleukin-6 rs2069837 (OR = 0.605, 95%CI = 0.217-1.689, p = 0.337), while significant in case of Interleukin-6 rs17147230 (OR = 0.298, 95%CI = 0.121-0.734, p = 0.0085). In conclusion, Interleukin-6 mutation is associated with hepatocellular carcinoma susceptibility. More related studies with other associated interleukins and their whole gene sequencing will be required.Entities:
Keywords: HCC; Interleukin-6; Risk factors; SNP
Year: 2020 PMID: 32266003 PMCID: PMC7114800 DOI: 10.1186/s13027-020-00285-9
Source DB: PubMed Journal: Infect Agent Cancer ISSN: 1750-9378 Impact factor: 2.965
Specific primers for IL-6 regions
| Region | Primer Name | Sequence (5′–3′) |
|---|---|---|
| rs2069837 | Outer Forward | CTTCCTGCTGGAACATTCTATGGC |
| Outer Reverse | CTTCCTGCTGGAACATTCTATGGC | |
| Inner Forward | ACTGTGTGCCAGGCACTTTAG | |
| Inner Reverse | GTTTTGAAGATTAGACACAATATTTATT | |
| rs17147230 | Outer Forward | AAAAGGGCAAGGAAGGGAGGTA |
| Outer Reverse | CACGAGTCATTTGAGCCATCTTTG | |
| Inner Forward | CAGCCAATGCTTTGCATGCTT | |
| Inner Reverse | CAGTGTCATCAGCAGAAACTT |
Fig. 1Occurrence of HCC in different age groups
Fig. 2Sample Gel picture of IL-6 region rs2069837. A region of 432 bp were amplified containing the rs2069837 as control (a, lane 1 and 2). For SNP genotyping Forward Outer plus Inner Reverse primers of 117 bp and Inner Forward plus Reverse Outer of 321 bp product sizes were amplified. The AG shows heterozygous mutation (b, lane 1,2,3,5 and 6), while GG shows homozygous mutation, lane 4)
Fig. 3Sample Gel picture of IL-6 region rs17147230: A region of 226 bp containing the rs17147230 were amplified as control (b, lane 1–4). For mutation detection, Forward Outer plus Inner Reverse primers and Inner Forward plus Reverse Outer primers of products sizes 173 bp and 97 bp, respectively, were amplified. The A/T shows heterozygous mutation (a, lane 1–4)
Statistical relationship and Allele/Genotypes frequencies analysis of rs2069837 Loci in HCC cases and control subjects
| Allele/Genotype | Cases | Control | OR | 95% CI | |
|---|---|---|---|---|---|
| A | 76 (0.53)* | 54 (0.71)* | Reference | ||
| G | 68 (0.47)* | 22 (0.29)* | 2.196 | 1.213–3.978 | 0.0094 |
| AA | 14 (0.19)* | 24 (0.63)* | Reference | ||
| AG | 48 (0.63)* | 6 (0.16)* | 10.667 | 3.923–29.001 | < 0.0001 |
| GG | 10 (0.14)* | 8 (0.21)* | 0.605 | 0.217–1.689 | 0.337 |
* Figures in parenthesis indicate allele or genotype frequencies in cases and controls respectively
Statistical relationship and Allele/Genotypes frequencies analysis of rs17147230 Loci in HCC cases and control subjects
| Allele/Genotype | Cases | Control | OR | 95% CI | |
|---|---|---|---|---|---|
| A | 76 (0.53)* | 48 (0.63)* | Reference | ||
| T | 68 (0.47)* | 30 (0.39)* | 1.432 | 0.817–2.509 | 0.210 |
| AA | 14 (0.19)* | 24 (0.63)* | Reference | ||
| AT | 48 (0.63)* | 0 (0.00)* | 75.385 | 9.797–580.065 | < 0.0001 |
| TT | 10 (0.14)* | 14 (0.37)* | 0.298 | 0.121–0.734 | 0.0085 |
* Figures in parenthesis indicate allele or genotype frequencies in cases and controls respectively