| Literature DB >> 27812403 |
Zoran Bogdanović1, Ivana Marinović-Terzić2, Sendi Kuret3, Ana Jerončić4, Nikola Bradarić5, Gea Forempoher3, Ozren Polašek6, Šimun Anđelinović3, Janoš Terzić2.
Abstract
BACKGROUND: Several genes and their single nucleotide polymorphisms (SNPs) are associated with either spontaneous resolution of hepatitis C infection or better treatment-induced viral clearance. We tested a cohort of intravenous drug users (IVDU) diagnosed with chronic hepatitis C virus (HCV) for treatment response and its association with the SNPs in the interleukin-6 (rs1800795-IL6) and the interleukin-28B (rs12979860-IL28B) genes.Entities:
Keywords: Genetic variation; Hepatitis C; IL-28; IL-6; Intravenous drug users; Sustained virological response
Year: 2016 PMID: 27812403 PMCID: PMC5088582 DOI: 10.7717/peerj.2576
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Figure 1PCR electrophoresis results for rs12979860 genotyping.
M, marker; ns, non specific band; CC, CT, and TT–rs12979860 genotypes.
Demographic and clinical characteristics of IVDU patients by the response-to-treatment status.
| SVR, N = 78 | NR, N = 32 | Statistics | |
|---|---|---|---|
| Men | 56 (72%) | 26 (81%) | Chi square test, p = 0.301 |
| Women | 22 (28%) | 6 (19%) | |
| 40 (35–45) | 41.5 (39–47) | Mann-Whitney, p = 0.041 | |
| Mean Ishak score | 3 (2.0–3.0) | 2 (1.0–3.0) | Mann-Whitney, p = 0.077 |
| Mean Knodell score | 7 (5.0–9.0) | 6 (5.0–9.0) | Mann-Whitney, p = 0.803 |
| 1 | 51 (73%) | 19 (27%) | Chi square test, p = 0.706 |
| 3 | 27 (68%) | 13 (33%) | |
Notes:
SVR, sustained viral response; NR, non responders.
Liver fibrosis was scored by Ishak fibrosis score (0–6) as previously described (Ishak et al., 1995).
Histology activity index by Knodell score (0–18) in chronic active hepatitis (Knodell et al., 1981).
Distributions of rs1800795-IL6 and rs12979860-IL28B genotypes, by the response-to-treatment group.
| SNP | Genotype | SVR, N = 78 | NR, N = 32 | Total |
|---|---|---|---|---|
| IL-28B, N (%) | CC | 22 (28%) | 8 (25%) | 30 (27%) |
| CT | 50 (64%) | 19 (59%) | 69 (63%) | |
| TT | 6 (8%) | 5 (16%) | 11 (10%) | |
| IL-6, N (%) | GG | 27 (35%) | 16 (50%) | 43 (39%) |
| GC | 37 (47%) | 15 (47%) | 52 (47%) | |
| CC | 14 (18%) | 1 (3%) | 15 (14%) |
Note:
SVR, sustained viral response; NR, non responders.
Figure 2The percentage of patients with SVR by the rs1800795-IL6 genotypes.
n, total number of patients with each genotype.
Figure 3The distribution of rs12979860-IL28B genotypes among: IVDU with chronic HCV (in black bars), and the underlying (base), apparently healthy population (in gray bars).
Shown are percentages with accompanying 95% CI. * Statistically significant difference, p < 0.05.