Literature DB >> 3224809

Evolution by gene duplication and compensatory advantageous mutations.

T Ohta1.   

Abstract

Relaxation of selective constraint is thought to play an important role for evolution by gene duplication, in connection with compensatory advantageous mutant substitutions. Models were investigated by incorporating gene duplication by unequal crossing over, selection, mutation and random genetic drift into Monte Carlo simulations. Compensatory advantageous mutations were introduced, and simulations were carried out with and without relaxation, when genes are redundant on chromosomes. Relaxation was introduced by assuming that deleterious mutants have no effect on fitness, so long as one or more genes free of such mutations remain in the array. Compensatory mutations are characterized by the intermediate deleterious step of their substitutions, and therefore relaxation by gene redundancy is important. Through extensive Monte Carlo simulations, it was found that compensatory mutant substitutions require relaxation in addition to gene duplication, when mutant effects are large. However when mutant effects are small, such that the product of selection coefficient and population size is around unity, evolution by compensatory mutation is enhanced by gene duplication even without relaxation.

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Year:  1988        PMID: 3224809      PMCID: PMC1203561     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  12 in total

1.  On the probability of fixation of mutant genes in a population.

Authors:  M KIMURA
Journal:  Genetics       Date:  1962-06       Impact factor: 4.562

2.  A model of evolution for accumulating genetic information.

Authors:  T Ohta
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3.  Slightly deleterious mutant substitutions in evolution.

Authors:  T Ohta
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4.  Opossum Hb chain sequence and neutral mutation theory.

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Journal:  Nature       Date:  1974-11-01       Impact factor: 49.962

5.  Simulating evolution by gene duplication.

Authors:  T Ohta
Journal:  Genetics       Date:  1987-01       Impact factor: 4.562

Review 6.  The genome of Mycoplasma capricolum.

Authors:  A Muto; F Yamao; S Osawa
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1987

7.  Genes-in-pieces revisited.

Authors:  W Gilbert
Journal:  Science       Date:  1985-05-17       Impact factor: 47.728

8.  Concerted evolution of the immunoglobulin VH gene family.

Authors:  T Gojobori; M Nei
Journal:  Mol Biol Evol       Date:  1984-02       Impact factor: 16.240

9.  Structure-function relationship of [2Fe-2S] ferredoxins and design of a model molecule.

Authors:  T Tsukihara; M Kobayashi; M Nakamura; Y Katsube; K Fukuyama; T Hase; K Wada; H Matsubara
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10.  UGA is read as tryptophan in Mycoplasma capricolum.

Authors:  F Yamao; A Muto; Y Kawauchi; M Iwami; S Iwagami; Y Azumi; S Osawa
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

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  15 in total

1.  Simulation study of a multigene family, with special reference to the evolution of compensatory advantageous mutations.

Authors:  C J Basten; T Ohta
Journal:  Genetics       Date:  1992-09       Impact factor: 4.562

2.  Gene conversion and functional divergence in the beta-globin gene family.

Authors:  Gabriela Aguileta; Joseph P Bielawski; Ziheng Yang
Journal:  J Mol Evol       Date:  2004-08       Impact factor: 2.395

3.  Tandem repetitive D domains of the sperm ligand zonadhesin evolve faster in the paralogue than in the orthologue comparison.

Authors:  Holger Herlyn; Hans Zischler
Journal:  J Mol Evol       Date:  2006-10-06       Impact factor: 2.395

4.  The molecular evolution of the small heat-shock proteins in plants.

Authors:  E R Waters
Journal:  Genetics       Date:  1995-10       Impact factor: 4.562

5.  Estimating substitution rates in ribosomal RNA genes.

Authors:  A Rzhetsky
Journal:  Genetics       Date:  1995-10       Impact factor: 4.562

6.  The population genetics of synthetic lethals.

Authors:  P C Phillips; N A Johnson
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

7.  Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution.

Authors:  J H Nadeau; D Sankoff
Journal:  Genetics       Date:  1997-11       Impact factor: 4.562

8.  How often do duplicated genes evolve new functions?

Authors:  J B Walsh
Journal:  Genetics       Date:  1995-01       Impact factor: 4.562

9.  Sequence variation of alcohol dehydrogenase (Adh) paralogs in cactophilic Drosophila.

Authors:  Luciano M Matzkin; Walter F Eanes
Journal:  Genetics       Date:  2003-01       Impact factor: 4.562

10.  Functional consequence of positive selection revealed through rational mutagenesis of human myeloperoxidase.

Authors:  Noeleen B Loughran; Sara Hinde; Sally McCormick-Hill; Kevin G Leidal; Sarah Bloomberg; Sinéad T Loughran; Brendan O'Connor; Ciarán O'Fágáin; William M Nauseef; Mary J O'Connell
Journal:  Mol Biol Evol       Date:  2012-02-21       Impact factor: 16.240

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