Literature DB >> 32246994

The unique kind of human artificial chromosome: Bypassing the requirement for repetitive centromere DNA.

Craig W Gambogi1, Jennine M Dawicki-McKenna1, Glennis A Logsdon2, Ben E Black3.   

Abstract

Centromeres are essential components of all eukaryotic chromosomes, including artificial/synthetic ones built in the laboratory. In humans, centromeres are typically located on repetitive α-satellite DNA, and these sequences are the "major ingredient" in first-generation human artificial chromosomes (HACs). Repetitive centromeric sequences present a major challenge for the design of synthetic mammalian chromosomes because they are difficult to synthesize, assemble, and characterize. Additionally, in most eukaryotes, centromeres are defined epigenetically. Here, we review the role of the genetic and epigenetic contributions to establishing centromere identity, highlighting recent work to hijack the epigenetic machinery to initiate centromere identity on a new generation of HACs built without α-satellite DNA. We also discuss the opportunities and challenges in developing useful unique sequence-based HACs.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CENP-A; Centromere; Chromatin; HAC; HJURP

Mesh:

Substances:

Year:  2020        PMID: 32246994      PMCID: PMC7253334          DOI: 10.1016/j.yexcr.2020.111978

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  73 in total

1.  Genomic and genetic definition of a functional human centromere.

Authors:  M G Schueler; A W Higgins; M K Rudd; K Gustashaw; H F Willard
Journal:  Science       Date:  2001-10-05       Impact factor: 47.728

Review 2.  Repair of a Site-Specific DNA Cleavage: Old-School Lessons for Cas9-Mediated Gene Editing.

Authors:  Danielle N Gallagher; James E Haber
Journal:  ACS Chem Biol       Date:  2017-11-14       Impact factor: 5.100

Review 3.  Epigenetic regulation of heterochromatic DNA stability.

Authors:  Jamy C Peng; Gary H Karpen
Journal:  Curr Opin Genet Dev       Date:  2008-03-26       Impact factor: 5.578

4.  Crystal structure of the human centromeric nucleosome containing CENP-A.

Authors:  Hiroaki Tachiwana; Wataru Kagawa; Tatsuya Shiga; Akihisa Osakabe; Yuta Miya; Kengo Saito; Yoko Hayashi-Takanaka; Takashi Oda; Mamoru Sato; Sam-Yong Park; Hiroshi Kimura; Hitoshi Kurumizaka
Journal:  Nature       Date:  2011-07-10       Impact factor: 49.962

5.  The cenpB gene is not essential in mice.

Authors:  M Kapoor; R Montes de Oca Luna; G Liu; G Lozano; C Cummings; M Mancini; I Ouspenski; B R Brinkley; G S May
Journal:  Chromosoma       Date:  1998-12       Impact factor: 4.316

6.  Formation of novel CENP-A domains on tandem repetitive DNA and across chromosome breakpoints on human chromosome 8q21 neocentromeres.

Authors:  Dan Hasson; Alicia Alonso; Fanny Cheung; James H Tepperberg; Peter R Papenhausen; John J M Engelen; Peter E Warburton
Journal:  Chromosoma       Date:  2011-08-09       Impact factor: 4.316

7.  Yeast centromere DNA is in a unique and highly ordered structure in chromosomes and small circular minichromosomes.

Authors:  K S Bloom; J Carbon
Journal:  Cell       Date:  1982-06       Impact factor: 41.582

8.  Design of a synthetic yeast genome.

Authors:  Sarah M Richardson; Leslie A Mitchell; Giovanni Stracquadanio; Kun Yang; Jessica S Dymond; James E DiCarlo; Dongwon Lee; Cheng Lai Victor Huang; Srinivasan Chandrasegaran; Yizhi Cai; Jef D Boeke; Joel S Bader
Journal:  Science       Date:  2017-03-10       Impact factor: 47.728

9.  Molecular cytogenetic characterization of repetitive sequences comprising centromeric heterochromatin in three Anseriformes species.

Authors:  Yoshinobu Uno; Chizuko Nishida; Ayano Hata; Satoshi Ishishita; Yoichi Matsuda
Journal:  PLoS One       Date:  2019-03-26       Impact factor: 3.240

10.  A 17-kD centromere protein (CENP-A) copurifies with nucleosome core particles and with histones.

Authors:  D K Palmer; K O'Day; M H Wener; B S Andrews; R L Margolis
Journal:  J Cell Biol       Date:  1987-04       Impact factor: 10.539

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  1 in total

Review 1.  Guarding the Genome: CENP-A-Chromatin in Health and Cancer.

Authors:  Megan A Mahlke; Yael Nechemia-Arbely
Journal:  Genes (Basel)       Date:  2020-07-16       Impact factor: 4.096

  1 in total

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