| Literature DB >> 32244705 |
Angelika A Adamus-Grabicka1, Magdalena Markowicz-Piasecka2, Marcin Cieślak3, Karolina Królewska-Golińska3, Paweł Hikisz4, Joachim Kusz5, Magdalena Małecka6, Elzbieta Budzisz1.
Abstract
A series of 3-benzylidenechrmanones 1, 3, 5, 7, 9 and theirEntities:
Keywords: 3-benzylideneflavanone/3-benzylidenechromanone; DNA interaction; cytotoxicity; lipophilicity; spiropyrazolines
Mesh:
Substances:
Year: 2020 PMID: 32244705 PMCID: PMC7180617 DOI: 10.3390/molecules25071613
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Examples of pyrazoline analogs with biological activity: (A)–anticancer, (B)–antibacterial, (C)–antifungal, (D)–anti-inflammatory, (E)–antidepressant, (F)—nitric oxide synthase (NOS) inhibitor and (G)—cannabinoid CB1 receptor antagonist.
Scheme 1The route of synthesis of the examined compounds. 1, 2: R = Ph, R1 = p-OCH3; 3, 4: R = H, R1 = p-OCH3; 5; 6: R = Ph, R1 = H; 7; 8: R = H, R1 = H; 9, 10: R = Ph, R1 = m-OCH3; 11: R = Ph, R1 = p-N(C2H5)2; 12: R = H, R1 = p-N(C2H5)2.
Figure 2The molecular structure of 2 (a) and 8 (c) with an atom numbering. The chemical structure of 2 (b) and 8 (d). Scheme. (e) represents the overlay of three molecules in the asymmetric unit in the compound 8 crystal structure.
Ring puckering parameters with asymmetry parameters and dihedral angle between chromanone skeleton (A/B rings) and C ring.
| Compound/Molecule | Q (Å) | θ (°) | Φ (°) | Asymmetry Parameter (°) | Conformation |
|---|---|---|---|---|---|
|
| 0.211(2) | - | 108.9(3) | ΔCs(C11) = 0.2(2) | E |
| 0.411(2) | 51.2(2) | 73.2(2) | ΔCs(C10) = 5.9(2) | E | |
|
| 0.307(2) | - | 288.45(4) | ΔCs(C11) = 0.4(2) | E |
| 0.469(2) | 54.0(2) | 83.8(3) | ΔC2(C2-C3) = 9.5(2) | distorted H | |
|
| 0.236(2) | - | 108.8(5) | ΔCs(C41) = 0.2(2) | E |
| 0.431(2) | 53.9(2) | 78.6(3) | ΔCs(C32) = 10.5(2) | distorted E | |
|
| 0.240(2) | - | 108.8(5) | ΔCs(C61) = 0.1(2) | E |
| 0.414(2) | 53.9(3) | 74.7(3) | ΔCs(C62) = 7.4(2) | distorted E |
Q, θ, Φ puckering parameters calculated according to Cremer & Pople [11], ΔCs, ΔC2—asymmetry parameters calculated due to Duax & Norton [12] E, B, S/B, T/B define conformations: envelope, boat, between screw-boat & boat and between twist boat & boat. Molecule 1,2,3 (see Table 1) corresponds to three different molecules in compound 8.
Figure 3Partial molecular packing of 2 showing hydrogen-bonded dimers and chains.
Figure 4Partial molecular packing of 8 showing the 3-D network of hydrogen bonds.
Hydrogen bond geometry in (Å).
| D-H | H…A | D…A | <D-H…A | |
|---|---|---|---|---|
|
| ||||
| C12-H12A…O1i | 0.99 | 2.56 | 3.392(2) | 136 |
| C2-H2…O4ii | 1.00 | 2.61 | 3.388(2) | 135 |
| C24-H24…O4iii | 0.95 | 2.53 | 3.239(2) | 131 |
| C26-H26…N2i | 0.95 | 2.74 | 3.416(2) | 129 |
| C11-H11…N1i | 0.85 | 2.67 | 3.653(2) | 180 |
| C11-H11…O4intra | 0.93 | 2.68 | 3.497(2) | 147 |
|
| ||||
|
| ||||
| C6-H6…O1iv | 0.95 | 2.59 | 3.304(2) | 132 |
| C14-H14…N31 | 0.95 | 2.60 | 3.316(3) | 133 |
| C11-H11…O4intra | 1.00 | 2.45 | 2.863(2) | 104 |
|
| ||||
| C32-H32A…O34v | 0.99 | 2.47 | 3.373(2) | 152 |
| C36-H36…O31iii | 0.99 | 2.45 | 3.361(2) | 161 |
| C48-H48A…N2vi | 0.99 | 2.61 | 3.473(2) | 146 |
| C44-H44…O64 | 0.95 | 2.53 | 3.418(2) | 157 |
| C41-H41…O34intra | 1.00 | 2.45 | 2.799(2) | 100 |
|
| ||||
| C66-H66…O61iii | 0.95 | 2.57 | 3.281(2) | 132 |
| C71-H71…O64intra | 1.00 | 2.43 | 2.783(2) | 100 |
symmetry code: (i) 1/2 − x, 1/2 + y, 1/2 − z; (ii): 1/2 − x,−1/2 + y,1/2 − z; (iii): 1 + x, y, z; (iv): 1 + x,y,z; (v): −1 + x, y, z; (vi): 3/2 − x, 1/2 + y, 1/2 − z.
The lipophilicity values and cytotoxic activity of compounds against HL-60, NALM-6, WM-115 and COLO-205 cancer cell lines. The results are presented as IC50 values in the µM range.
| Number of Compound | Chemical Structure | IC50 (µM) | ||||
|---|---|---|---|---|---|---|
| HL-60 | NALM-6 | WM-115 | COLO-205 | log | ||
|
|
| 53.38 ± 2.49 | 49.81 ± 2.35 | 58.13 ± 4.93 | 51.0 ± 2.3 | 4.79 |
|
|
| 3.0 ± 0.3 | 6.8 ± 0.4 | 5.5 ± 0.4 | 29.3 ± 2.35 | 5.42 |
|
|
| 45.36 ± 4.77 | 30.07 ± 3.15 | 23.53 ± 1.71 | 193.1 ± 2.9 | 4.08 |
|
|
| 74.05 ± 1.85 | 72.60 ± 4.56 | 75.27 ± 4.89 | 26.5 ± 1.8 | 4.68 |
|
|
| 33.74 ± 3.87 | 27.02 ± 3.10 | 47.41 ± 4.62 | 77.1 ± 1.9 | 4.90 |
|
|
| >1000 | 44.4 ± 6.3 | 57.4 ± 5.8 | 53.6 ± 1.6 | 5.88 |
|
|
| 34.78 ± 2.87 | 6.83 ± 0.18 | 12.75 ± 1.83 | 31 ± 1.4 | 4.23 |
|
|
| 473.9 ± 29.0 | 281.6 ± 49.4 | 415.0 ± 75.4 | >1000 | 2.35 |
|
|
| 35.89 ± 2.96 | 15.7 ± 6.23 | 16.89 ± 3.78 | 169.94 ± 3.81 | 5.83 |
|
|
| 9.4 ± 0.4 | 25.0 ± 3.3 | 49.2 ± 2.7 | 487.1 ± 4.1 | 5.42 |
|
|
| 8.36 ± 0.63 * | 9.08 ± 0.30 * | 6.45 ± 0.69 * | - | 5.69 |
|
|
| 11.76 ± 1.97 * | 8.69 ± 0.40 * | 18.09 ± 3.14 * | - | 3.43 |
|
|
| 676.7 ± 32.6 | 673.7 ± 22.5 | >1000 | 721.5 ± 6.4 | 2.19 |
|
|
| 58.0 ±4.0 | 77.1 ± 7.8 | 177.5 ± 21.5 | - | 2.16 |
|
|
| 0.8 ± 0.1 | 0.7 ± 0.3 | 18.2 ± 4.3 | 61.45 ± 3.2 | −2.21 |
|
|
| 4.3 ± 1.3 | 0.7 ± 0.2 | 422.2 ± 50.2 | 354.6 ± 73.7 | −2.30 |
* See literature [10]; ** Reference compounds.
Figure 5The effects of reference compounds, flavanone and chromanone (A) and synthesized compounds (B) on the integrity of the erythrocyte membrane. The results are presented as the percentage of hemolysis obtained from the interaction of studied compounds with 2% RBCs (red blood cell) suspension, compared to the positive control Triton X-100 constituting 100% hemolysis. The results are presented as mean ± SD; n = 4, * p < 0.05 vs. control; ** p < 0.01; *** p < 0.001.
Figure 6Microscope images of erythrocytes treated with (A)—reference compounds, chromanone and flavanone; (B)—compounds 1, 2, 3, 4, 5, 6, 7, 8, 9, 10. 2% erythrocyte suspension was treated at 37 °C for 60 min with indicated concentrations of compound. Representative phase-contrast images are shown (magnification of 400 times).
The cell cycle distribution of HL 60 cells after treatment with test compounds. The results are given as mean +/− standars deviation. The concentrations of the compounds (in µM) are given in the parenthesis and correspond to 1× IC50 and 0.5 × IC50 (µM). (n = 2) n-number of repetition (see Figure S3).
| HL 60 | DMSO Control | Quercetin (58) | Quercetin (29) | 2 (3) | 2 (1.5) | 7 (35) | 7 (18) | 12 (12) | 12 (6) | 11 (4.5) | 11 (9) | 10 (9.4) | 10 (4.7) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| 45.2 | 70.3 ± 2.2 | 11.6 ± 1.7 | 14.3 ± 2.4 | 21.3 ± 10.9 | 23.5 ± 21.7 | 50.4 ± 1.0 | 57.7 ± 7.2 | 19.5 ± 12.3 | 19.3 ± 2.6 | 3.2 ± 2.8 | 6 ± 3.5 | 16.2 ± 13.4 | 40.3 ± 26.8 |
|
| 39.2 | 20.5 ± 1.7 | 39.4 ± 2.5 | 25.0 ± 2.0 | 25.0 ± 10.4 | 23 ± 2.3 | 23.5 ± 0.9 | 21.5 ± 3.8 | 28.0 ± 1.4 | 28.4 ± 8.8 | 29.1 ± 3.1 | 34.8 ± 10.5 | 33.3 ± 1.1 | 30.2 ± 13.9 |
|
| 15.6 | 9.2 ± 3.9 | 49.0 ± 4.2 | 60.8 ± 0.4 | 53.7 ± 21.4 | 53.5 ± 19.4 | 26.1 ± 0.1 | 20.8 ± 3.4 | 52.4 ± 10.9 | 52.4 ± 6.2 | 67.8 ± 0.3 | 59.2 ± 6.9 | 50.5 ± 12.2 | 29.4 ± 12.9 |
Figure 7Digestion of pcDNA3.1HisC (total length 5.5 kbp) with BamH1 endonuclease. M—marker DNA; A—not digested plasmid DNA; B—plasmid DNA digested with BamH1 (DNA present in linear form); C—plasmid DNA + daunorubicin + BamH1; D—plasmid DNA + quercetin + BamH1; E—plasmid DNA + 2 + BamH1; F—plasmid DNA + 7 + BamH1, G—plasmid DNA +12 + BamH1, H—plasmid DNA + 11+ BamH1, I—plasmid DNA +10 + BamH1.
Figure 8The effect of the test compounds and quercetin on the cell cycle in HL-60 cells. Cell cycle distribution of HL-60 cells after treatment with the test compounds. The concentrations of the compounds (in µM) are given in the parenthesis and correspond to 1× IC50 and 0.5 × IC50 (µM). 1% DMSO was used as the vehicle control. Bars represent mean values from two independent experiments.
Crystallographic data for structures 2 and 8.
| 2 | 8 | |
|---|---|---|
| Chemical formula | C24H20N2O3 | C17H14N2O2 |
| Formula weight | 384.42 | 278.30 |
| Crystal system | Monoclinic | Monoclinic |
| Space group | P21/n | P21/n |
| Temperature (K) | 100.0(1) | 100.0(1) |
| a (Å) | 9.3885(2) | 6.7189(1) |
| b (Å) | 10.6241(2) | 23.6127(5) |
| c (Å) | 19.2202(5) | 25.0637(7) |
| α (°) | 90 | 90 |
| β (°) | 90.768(2) | 95.700(2) |
| γ (°) | 90 | 90 |
| V (Å3) | 1916.93(7) | 3956.73(15) |
| Z | 4 | 12 |
| Radiationtype | Mo Kα | Cu Kα |
| Measuredreflections | 15,186 | 25,640 |
| Uniquereflections | 3965 | 7120 |
| Observedreflections | 3578 | 5196 |
| R[F2 > 2σ(F2)] | 0.0334 | 0.0466 |
| wR(F2) | 0.0874 | 0.1228 |
| S | 1.02 | 1.00 |
| No. of reflections | 2 3965 | 7120 |
| No. of parameters | 263 | 568 |
| No. of restraints | 0 | 0 |
| Δρmax (e Å−3) | 0.33 | 0.22 |
| Δρmin (e Å−3) | −0.20 | −0.25 |