Literature DB >> 32239318

Allelic frequency database of 15 polymorphic autosomal STRs in the Malayalam-speaking population of Kerala, India.

R Sreekumar1, Ajeesh Thekkatavan2, Pankaj Shrivastava3, R K Kumawat4, Shivani Dixit5, Gyaneshwer Chaubey6.   

Abstract

In this study, we assessed and established an allelic frequency database of Malayalam-speaking population of south western Indian state Kerala, using 15 polymorphic short tandem repeats (STRs) genetic markers. For this study, 464 unrelated healthy individuals were randomly selected following the ethical standards. The most polymorphic and most discriminating locus was D2S1338, with a value of 0.860 and 0.968, respectively. The range of heterozygosity extended from a minimum of 0.668 (TH01) to a maximum of 0.847 (D2S1338). The combined discrimination power (CPD) and combined exclusion power (CPE) were 1 and 0.999997861, respectively, for all 15 autosomal STR loci under study. The combined probability of match (CPM) and combined paternity index (CPI) for all 15 autosomal STR loci were found to be 9.85 × 10-19 and 4.18 × 105, respectively.

Entities:  

Keywords:  Genetic diversity; Kerala; Malayalam-speaking population; Polymorphism; STRs

Mesh:

Year:  2020        PMID: 32239318     DOI: 10.1007/s00414-020-02286-0

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  5 in total

1.  Genetic variation of 15 autosomal microsatellite loci in a Tamil population from Tamil Nadu, Southern India.

Authors:  Kuppareddi Balamurugan; S Kanthimathi; M Vijaya; G Suhasini; George Duncan; Martin Tracey; Bruce Budowle
Journal:  Leg Med (Tokyo)       Date:  2010-09-01       Impact factor: 1.376

2.  Allele frequency distribution for 21 autosomal STR loci in Bhutan.

Authors:  Thirsa Kraaijenbrink; George L van Driem; Karma Tshering of Gaselô; Peter de Knijff
Journal:  Forensic Sci Int       Date:  2006-05-24       Impact factor: 2.395

3.  Genetic insights into the origins of Tibeto-Burman populations in the Himalayas.

Authors:  Tenzin Gayden; Sheyla Mirabal; Alicia M Cadenas; Harlette Lacau; Tanya M Simms; Diana Morlote; Shilpa Chennakrishnaiah; Rene J Herrera
Journal:  J Hum Genet       Date:  2009-02-27       Impact factor: 3.172

4.  Allele frequencies of 19 autosomal STR loci in Manchu population of China with phylogenetic structure among worldwide populations.

Authors:  Jian Liu; Li Guo; Rong Qi; Shu-Yin Li; Jiao-Yang Yin; Wei Zhang; Zhongfu Sun; Xiurong Tian; Bing Gao
Journal:  Gene       Date:  2013-08-06       Impact factor: 3.688

5.  Allele frequencies of 15 STR loci (Identifiler™ kit) in Basque-Americans.

Authors:  Jason Besecker; Gianluca Peri; Michael Davis; Josu Zubizarreta; Greg Hampikian
Journal:  Leg Med (Tokyo)       Date:  2017-12-12       Impact factor: 1.376

  5 in total
  1 in total

1.  Population genetic portrait of Pakistani Lahore-Christians based on 32 STR loci.

Authors:  Aqsa Rubab; Muhammad Shafique; Faqeeha Javed; Samia Saleem; Fatima Tuz Zahra; Dennis McNevin; Ahmad Ali Shahid
Journal:  Sci Rep       Date:  2020-11-03       Impact factor: 4.379

  1 in total

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