Literature DB >> 32230871

Detection of Rare Objects by Flow Cytometry: Imaging, Cell Sorting, and Deep Learning Approaches.

Denis V Voronin1,2, Anastasiia A Kozlova1, Roman A Verkhovskii1,3, Alexey V Ermakov1,4, Mikhail A Makarkin1, Olga A Inozemtseva1, Daniil N Bratashov1.   

Abstract

Flow cytometry nowadays is among the main working instruments in modern biology paving the way for clinics to provide early, quick, and reliable diagnostics of many blood-related diseases. The major problem for clinical applications is the detection of rare pathogenic objects in patient blood. These objects can be circulating tumor cells, very rare during the early stages of cancer development, various microorganisms and parasites in the blood during acute blood infections. All of these rare diagnostic objects can be detected and identified very rapidly to save a patient's life. This review outlines the main techniques of visualization of rare objects in the blood flow, methods for extraction of such objects from the blood flow for further investigations and new approaches to identify the objects automatically with the modern deep learning methods.

Entities:  

Keywords:  cell labeling; cell sorting; circulating tumor cells; deep learning; flow cytometry data analysis; imaging flow cytometry; liquid biopsy

Mesh:

Substances:

Year:  2020        PMID: 32230871      PMCID: PMC7177904          DOI: 10.3390/ijms21072323

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  322 in total

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2.  An intravascular magnetic wire for the high-throughput retrieval of circulating tumour cells in vivo.

Authors:  Ophir Vermesh; Amin Aalipour; T Jessie Ge; Yamil Saenz; Yue Guo; Israt S Alam; Seung-Min Park; Charlie N Adelson; Yoshiaki Mitsutake; Jose Vilches-Moure; Elias Godoy; Michael H Bachmann; Chin Chun Ooi; Jennifer K Lyons; Kerstin Mueller; Hamed Arami; Alfredo Green; Edward I Solomon; Shan X Wang; Sanjiv S Gambhir
Journal:  Nat Biomed Eng       Date:  2018-07-16       Impact factor: 25.671

Review 3.  Advances in fluorescent protein technology.

Authors:  Nathan C Shaner; George H Patterson; Michael W Davidson
Journal:  J Cell Sci       Date:  2007-12-15       Impact factor: 5.285

4.  Near-ultraviolet laser diodes for brilliant ultraviolet fluorophore excitation.

Authors:  William G Telford
Journal:  Cytometry A       Date:  2015-04-30       Impact factor: 4.355

5.  A glass microfluidic chip for continuous blood cell sorting by a magnetic gradient without labeling.

Authors:  Bai-Yan Qu; Zhi-Yong Wu; Fang Fang; Zhi-Ming Bai; Dong-Zhi Yang; Shu-Kun Xu
Journal:  Anal Bioanal Chem       Date:  2008-09-20       Impact factor: 4.142

Review 6.  Recent applications of microchip electrophoresis to biomedical analysis.

Authors:  Nantana Nuchtavorn; Worapot Suntornsuk; Susan M Lunte; Leena Suntornsuk
Journal:  J Pharm Biomed Anal       Date:  2015-03-20       Impact factor: 3.935

7.  Surface acoustic wave (SAW) acoustophoresis: now and beyond.

Authors:  Sz-Chin Steven Lin; Xiaole Mao; Tony Jun Huang
Journal:  Lab Chip       Date:  2012-07-10       Impact factor: 6.799

Review 8.  Synthesis and surface engineering of iron oxide nanoparticles for biomedical applications.

Authors:  Ajay Kumar Gupta; Mona Gupta
Journal:  Biomaterials       Date:  2005-06       Impact factor: 12.479

9.  Acoustophoretic sorting of viable mammalian cells in a microfluidic device.

Authors:  Allen H J Yang; H Tom Soh
Journal:  Anal Chem       Date:  2012-12-06       Impact factor: 6.986

10.  Circulating tumor cells, disease progression, and survival in metastatic breast cancer.

Authors:  Massimo Cristofanilli; G Thomas Budd; Matthew J Ellis; Alison Stopeck; Jeri Matera; M Craig Miller; James M Reuben; Gerald V Doyle; W Jeffrey Allard; Leon W M M Terstappen; Daniel F Hayes
Journal:  N Engl J Med       Date:  2004-08-19       Impact factor: 91.245

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  5 in total

1.  Diagnosis of Acute Leukemia by Multiparameter Flow Cytometry with the Assistance of Artificial Intelligence.

Authors:  Pengqiang Zhong; Mengzhi Hong; Huanyu He; Jiang Zhang; Yaoming Chen; Zhigang Wang; Peisong Chen; Juan Ouyang
Journal:  Diagnostics (Basel)       Date:  2022-03-28

Review 2.  Fluorescent Nanosystems for Drug Tracking and Theranostics: Recent Applications in the Ocular Field.

Authors:  Elide Zingale; Alessia Romeo; Salvatore Rizzo; Cinzia Cimino; Angela Bonaccorso; Claudia Carbone; Teresa Musumeci; Rosario Pignatello
Journal:  Pharmaceutics       Date:  2022-04-28       Impact factor: 6.525

3.  Inertial cell sorting of microparticle-laden flows: An innovative OpenFOAM-based arbitrary Lagrangian-Eulerian numerical approach.

Authors:  Zahra Hashemi Shahraki; Mahdi Navidbakhsh; Robert A Taylor
Journal:  Biomicrofluidics       Date:  2021-02-19       Impact factor: 2.800

4.  Classifying grains using behaviour-informed machine learning.

Authors:  Sudip Laudari; Benjy Marks; Pierre Rognon
Journal:  Sci Rep       Date:  2022-08-17       Impact factor: 4.996

5.  Dimensionality reduction by UMAP for visualizing and aiding in classification of imaging flow cytometry data.

Authors:  Ireneusz Stolarek; Anna Samelak-Czajka; Marek Figlerowicz; Paulina Jackowiak
Journal:  iScience       Date:  2022-09-15
  5 in total

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