Literature DB >> 32220850

Sex Determination by Two Y-Linked Genes in Garden Asparagus.

Alex Harkess1,2, Kun Huang3, Ron van der Hulst4, Bart Tissen4, Jeffrey L Caplan3, Aakash Koppula5,6, Mona Batish5,6, Blake C Meyers7,8, Jim Leebens-Mack2.   

Abstract

The origin and early evolution of sex chromosomes have been hypothesized to involve the linkage of factors with antagonistic effects on male and female function. Garden asparagus (Asparagus officinalis) is an ideal species to investigate this hypothesis, as the X and Y chromosomes are cytologically homomorphic and evolved from an ancestral autosome pair in association with a shift from hermaphroditism to dioecy. Mutagenesis screens paired with single-molecule fluorescence in situ hybridization directly implicate Y-specific genes that respectively suppress female (pistil) development and are necessary for male (anther) development. Comparison of contiguous X and Y chromosome assemblies shows that hemizygosity underlies the loss of recombination between the genes suppressing female organogenesis (SUPPRESSOR OF FEMALE FUNCTION) and promoting male function (TAPETAL DEVELOPMENT AND FUNCTION1 [aspTDF1]). We also experimentally demonstrate the function of aspTDF1. These findings provide direct evidence that sex chromosomes can function through linkage of two sex determination genes.
© 2020 American Society of Plant Biologists. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32220850      PMCID: PMC7268802          DOI: 10.1105/tpc.19.00859

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  33 in total

1.  The mechanism of sex determination in dioecious flowering plants.

Authors:  M WESTERGAARD
Journal:  Adv Genet       Date:  1958       Impact factor: 1.944

2.  Genome structure and emerging evidence of an incipient sex chromosome in Populus.

Authors:  Tongming Yin; Stephen P Difazio; Lee E Gunter; Xinye Zhang; Michell M Sewell; Scott A Woolbright; Gery J Allan; Collin T Kelleher; Carl J Douglas; Mingxiu Wang; Gerald A Tuskan
Journal:  Genome Res       Date:  2008-02-06       Impact factor: 9.043

3.  A Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in Kiwifruit.

Authors:  Takashi Akagi; Isabelle M Henry; Haruka Ohtani; Takuya Morimoto; Kenji Beppu; Ikuo Kataoka; Ryutaro Tao
Journal:  Plant Cell       Date:  2018-04-06       Impact factor: 11.277

4.  A Gene Encoding a DUF247 Domain Protein Cosegregates with the S Self-Incompatibility Locus in Perennial Ryegrass.

Authors:  Chloé Manzanares; Susanne Barth; Daniel Thorogood; Stephen L Byrne; Steven Yates; Adrian Czaban; Torben Asp; Bicheng Yang; Bruno Studer
Journal:  Mol Biol Evol       Date:  2015-12-10       Impact factor: 16.240

5.  BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.

Authors:  Felipe A Simão; Robert M Waterhouse; Panagiotis Ioannidis; Evgenia V Kriventseva; Evgeny M Zdobnov
Journal:  Bioinformatics       Date:  2015-06-09       Impact factor: 6.937

6.  STAR: ultrafast universal RNA-seq aligner.

Authors:  Alexander Dobin; Carrie A Davis; Felix Schlesinger; Jorg Drenkow; Chris Zaleski; Sonali Jha; Philippe Batut; Mark Chaisson; Thomas R Gingeras
Journal:  Bioinformatics       Date:  2012-10-25       Impact factor: 6.937

7.  Molecular phylogeny of the genus Asparagus (Asparagaceae) explains interspecific crossability between the garden asparagus (A. officinalis) and other Asparagus species.

Authors:  Shosei Kubota; Itaru Konno; Akira Kanno
Journal:  Theor Appl Genet       Date:  2011-09-27       Impact factor: 5.699

8.  MYB transcription factor gene involved in sex determination in Asparagus officinalis.

Authors:  Kohji Murase; Shuji Shigenobu; Sota Fujii; Kazuki Ueda; Takanori Murata; Ai Sakamoto; Yuko Wada; Katsushi Yamaguchi; Yuriko Osakabe; Keishi Osakabe; Akira Kanno; Yukio Ozaki; Seiji Takayama
Journal:  Genes Cells       Date:  2016-11-21       Impact factor: 1.891

9.  StringTie enables improved reconstruction of a transcriptome from RNA-seq reads.

Authors:  Mihaela Pertea; Geo M Pertea; Corina M Antonescu; Tsung-Cheng Chang; Joshua T Mendell; Steven L Salzberg
Journal:  Nat Biotechnol       Date:  2015-02-18       Impact factor: 54.908

10.  A putative MYB35 ortholog is a candidate for the sex-determining genes in Asparagus officinalis.

Authors:  Daisuke Tsugama; Kohei Matsuyama; Mayui Ide; Masato Hayashi; Kaien Fujino; Kiyoshi Masuda
Journal:  Sci Rep       Date:  2017-02-08       Impact factor: 4.379

View more
  21 in total

Review 1.  Some thoughts about the words we use for thinking about sex chromosome evolution.

Authors:  Deborah Charlesworth
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-03-21       Impact factor: 6.237

2.  Reinvention of hermaphroditism via activation of a RADIALIS-like gene in hexaploid persimmon.

Authors:  Kanae Masuda; Yoko Ikeda; Takakazu Matsuura; Taiji Kawakatsu; Ryutaro Tao; Yasutaka Kubo; Koichiro Ushijima; Isabelle M Henry; Takashi Akagi
Journal:  Nat Plants       Date:  2022-03-17       Impact factor: 15.793

3.  Identification of a Male Sterile Candidate Gene in Lilium x formolongi and Transfer of the Gene to Easter Lily (L. longiflorum) via Hybridization.

Authors:  Takahiro Moriyama; Daniel John Shea; Naoto Yokoi; Seiro Imakiire; Takaaki Saito; Hikaru Ohshima; Hina Saito; Satoru Okamoto; Eigo Fukai; Keiichi Okazaki
Journal:  Front Plant Sci       Date:  2022-06-29       Impact factor: 6.627

Review 4.  Plant sex chromosomes defy evolutionary models of expanding recombination suppression and genetic degeneration.

Authors:  Susanne S Renner; Niels A Müller
Journal:  Nat Plants       Date:  2021-03-29       Impact factor: 15.793

Review 5.  The timing of genetic degeneration of sex chromosomes.

Authors:  Deborah Charlesworth
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-07-12       Impact factor: 6.671

6.  The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plant.

Authors:  Othman Al-Dossary; Bader Alsubaie; Ardashir Kharabian-Masouleh; Ibrahim Al-Mssallem; Agnelo Furtado; Robert J Henry
Journal:  Plant J       Date:  2021-10-08       Impact factor: 7.091

7.  Comparative transcriptome analysis of male and female flowers in Spinacia oleracea L.

Authors:  Ning Li; Ziwei Meng; Minjie Tao; Yueyuan Wang; Yulan Zhang; Shufen Li; Wujun Gao; Chuanliang Deng
Journal:  BMC Genomics       Date:  2020-12-01       Impact factor: 3.969

8.  VviPLATZ1 is a major factor that controls female flower morphology determination in grapevine.

Authors:  Pat Iocco-Corena; Jamila Chaïb; Laurent Torregrosa; Don Mackenzie; Mark R Thomas; Harley M Smith
Journal:  Nat Commun       Date:  2021-11-30       Impact factor: 14.919

Review 9.  The Diversity of Plant Sex Chromosomes Highlighted through Advances in Genome Sequencing.

Authors:  Sarah Carey; Qingyi Yu; Alex Harkess
Journal:  Genes (Basel)       Date:  2021-03-07       Impact factor: 4.096

10.  Integrative genomics reveals paths to sex dimorphism in Salix purpurea L.

Authors:  Brennan Hyden; Craig H Carlson; Fred E Gouker; Jeremy Schmutz; Kerrie Barry; Anna Lipzen; Aditi Sharma; Laura Sandor; Gerald A Tuskan; Guanqiao Feng; Matthew S Olson; Stephen P DiFazio; Lawrence B Smart
Journal:  Hortic Res       Date:  2021-08-01       Impact factor: 6.793

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.