| Literature DB >> 32210300 |
Eva Malacova1,2,3, Sawitchaya Tippaya1,4, Helen D Bailey5, Kevin Chai4, Brad M Farrant5, Amanuel T Gebremedhin1, Helen Leonard5, Michael L Marinovich1, Natasha Nassar6, Aloke Phatak4,7, Camille Raynes-Greenow8, Annette K Regan1,5,9, Antonia W Shand6,10, Carrington C J Shepherd5,11, Ravisha Srinivasjois1,5,12, Gizachew A Tessema1, Gavin Pereira13,14,15.
Abstract
Quantification of stillbirth risk has potential to support clinical decision-making. Studies that have attempted to quantify stillbirth risk have been hampered by small event rates, a limited range of predictors that typically exclude obstetric history, lack of validation, and restriction to a single classifier (logistic regression). Consequently, predictive performance remains low, and risk quantification has not been adopted into antenatal practice. The study population consisted of all births to women in Western Australia from 1980 to 2015, excluding terminations. After all exclusions there were 947,025 livebirths and 5,788 stillbirths. Predictive models for stillbirth were developed using multiple machine learning classifiers: regularised logistic regression, decision trees based on classification and regression trees, random forest, extreme gradient boosting (XGBoost), and a multilayer perceptron neural network. We applied 10-fold cross-validation using independent data not used to develop the models. Predictors included maternal socio-demographic characteristics, chronic medical conditions, obstetric complications and family history in both the current and previous pregnancy. In this cohort, 66% of stillbirths were observed for multiparous women. The best performing classifier (XGBoost) predicted 45% (95% CI: 43%, 46%) of stillbirths for all women and 45% (95% CI: 43%, 47%) of stillbirths after the inclusion of previous pregnancy history. Almost half of stillbirths could be potentially identified antenatally based on a combination of current pregnancy complications, congenital anomalies, maternal characteristics, and medical history. Greatest sensitivity is achieved with addition of current pregnancy complications. Ensemble classifiers offered marginal improvement for prediction compared to logistic regression.Entities:
Mesh:
Year: 2020 PMID: 32210300 PMCID: PMC7093523 DOI: 10.1038/s41598-020-62210-9
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Performance of models for predicting stillbirth using different classification algorithms and 10-fold cross validation.
| Classifiers | Model | AUC | 5% FPR | 10% FPR | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| +LR | −LR | Sensitivity | PPV | NPV | CorrectlyClassified | +LR | −LR | Sensitivity | PPV | NPV | Correctly Classified | |||
| Logistic Regression | A | 0.830 | 8.10 | 0.63 | 40.5 | 4.72 | 99.62 | 94.67 | 5.52 | 0.50 | 55.2 | 3.26 | 99.7 | 89.79 |
| B | 0.834 | 8.07 | 0.63 | 40.5 | 4.32 | 99.65 | 94.68 | 5.57 | 0.49 | 55.7 | 3.02 | 99.73 | 89.80 | |
| C | 0.811 | 7.59 | 0.66 | 37.8 | 3.89 | 99.65 | 94.72 | 5.14 | 0.54 | 51.6 | 2.67 | 99.71 | 89.75 | |
| D | 0.602 | 2.25 | 0.93 | 11.2 | 1.35 | 99.43 | 94.49 | 1.90 | 0.90 | 19.0 | 1.15 | 99.45 | 89.57 | |
| E | 0.633 | 3.29 | 0.88 | 16.5 | 1.80 | 99.51 | 94.54 | 2.44 | 0.84 | 24.4 | 1.35 | 99.53 | 89.64 | |
| F | 0.799 | 6.02 | 0.74 | 30.1 | 3.26 | 99.59 | 94.64 | 4.65 | 0.60 | 46.4 | 2.53 | 99.67 | 89.76 | |
| Decision Tree | A | 0.819 | 8.16 | 0.62 | 40.7 | 4.75 | 99.62 | 94.67 | 5.68 | 0.51 | 54.1 | 3.35 | 99.69 | 90.24 |
| B | 0.808 | 8.18 | 0.63 | 40.6 | 4.38 | 99.65 | 94.73 | 5.01 | 0.51 | 54.7 | 2.73 | 99.72 | 88.88 | |
| C | 0.776 | 6.98 | 0.68 | 35.8 | 3.59 | 99.64 | 94.58 | 5.19 | 0.63 | 42.3 | 2.69 | 99.67 | 91.40 | |
| D | 0.589 | 2.07 | 0.95 | 10.2 | 1.25 | 99.43 | 94.54 | 1.78 | 0.91 | 17.7 | 1.08 | 99.45 | 89.60 | |
| E | 0.599 | 3.16 | 0.89 | 15.2 | 1.73 | 99.50 | 94.68 | 2.33 | 0.86 | 23.0 | 1.29 | 99.52 | 89.67 | |
| F | 0.779 | 5.94 | 0.74 | 30.1 | 3.22 | 99.59 | 94.58 | 5.71 | 0.73 | 31.2 | 3.09 | 99.59 | 94.13 | |
| Random Forest | A | 0.831 | 8.12 | 0.63 | 40.6 | 4.73 | 99.62 | 94.67 | 5.55 | 0.50 | 55.5 | 3.28 | 99.70 | 89.79 |
| B | 0.836 | 8.22 | 0.62 | 41.1 | 4.40 | 99.65 | 94.71 | 5.66 | 0.48 | 56.4 | 3.07 | 99.73 | 89.85 | |
| C | 0.788 | 7.29 | 0.67 | 36.4 | 3.74 | 99.64 | 94.69 | 4.91 | 0.57 | 49.1 | 2.55 | 99.70 | 89.78 | |
| D | 0.594 | 2.09 | 0.94 | 10.4 | 1.26 | 99.43 | 94.48 | 1.75 | 0.92 | 17.5 | 1.06 | 99.44 | 89.57 | |
| E | 0.633 | 2.87 | 0.90 | 14.4 | 1.58 | 99.50 | 94.54 | 2.37 | 0.85 | 23.7 | 1.31 | 99.53 | 89.64 | |
| F | 0.801 | 5.96 | 0.74 | 29.8 | 3.23 | 99.59 | 94.64 | 4.66 | 0.59 | 46.7 | 2.54 | 99.67 | 89.76 | |
| XGBoost | A | 0.840 | 8.93 | 0.58 | 44.6 | 5.18 | 99.65 | 94.70 | 5.81 | 0.47 | 58.1 | 3.43 | 99.72 | 89.81 |
| B | 0.842 | 9.03 | 0.58 | 45.3 | 4.81 | 99.68 | 94.71 | 5.86 | 0.46 | 58.7 | 3.18 | 99.74 | 89.82 | |
| C | 0.804 | 7.54 | 0.66 | 37.6 | 3.86 | 99.65 | 94.69 | 5.12 | 0.54 | 51.2 | 2.66 | 99.71 | 89.81 | |
| D | 0.596 | 2.18 | 0.94 | 10.9 | 1.32 | 99.43 | 94.49 | 1.85 | 0.91 | 18.5 | 1.12 | 99.45 | 89.57 | |
| E | 0.628 | 3.31 | 0.88 | 16.6 | 1.82 | 99.51 | 94.55 | 2.47 | 0.84 | 24.7 | 1.36 | 99.53 | 89.64 | |
| F | 0.805 | 6.56 | 0.71 | 32.8 | 3.54 | 99.61 | 94.66 | 4.84 | 0.57 | 48.4 | 2.64 | 99.68 | 89.76 | |
| Multi-layer Perceptron | A | 0.836 | 8.57 | 0.60 | 42.8 | 4.98 | 99.63 | 94.69 | 5.65 | 0.48 | 56.5 | 3.34 | 99.71 | 89.80 |
| B | 0.840 | 8.69 | 0.60 | 43.5 | 4.64 | 99.67 | 94.71 | 5.73 | 0.48 | 57.2 | 3.11 | 99.73 | 89.83 | |
| C | 0.801 | 7.38 | 0.67 | 36.7 | 3.78 | 99.65 | 94.72 | 5.12 | 0.55 | 50.9 | 2.65 | 99.71 | 89.84 | |
| D | 0.595 | 2.15 | 0.94 | 10.8 | 1.30 | 99.43 | 94.49 | 1.84 | 0.91 | 18.4 | 1.11 | 99.45 | 89.56 | |
| E | 0.634 | 3.24 | 0.88 | 16.2 | 1.78 | 99.51 | 94.57 | 2.41 | 0.84 | 24.1 | 1.33 | 99.53 | 89.64 | |
| F | 0.802 | 6.43 | 0.71 | 32.1 | 3.47 | 99.60 | 94.65 | 4.81 | 0.58 | 48.1 | 2.62 | 99.68 | 89.77 | |
Estimates with 95% confidence intervals are provided in the Supplementary Material, Supplementary Table 6.
Model A – Socio-demographics, chronic conditions, current pregnancy complications and characteristics.
Model B – Predictors from Model A, plus previous pregnancy history.
Model C – Predictors from Model A, plus grandmother’s pregnancy history, parental birth outcomes.
Model D – Predictors known at the booking appointment.
Model E – Predictors from Model D, plus previous pregnancy history.
Model F – Predictors from Model E, plus current pregnancy complications and characteristics.
Abbreviations: AUC – Area under the receiving-operator characteristic curve; +LR – Positive likelihood ratio; -LR – Negative likelihood ratio; FPR – alpha (type I error) = 1-specificity; Sensitivity – detection rate, TPR; TP – True Positives; FP – False Positives; TN – True Negatives; FN – False Negatives; PPV – Positive predictive value = TP/(TP + FP); NPV - Negative predictive value = TN/(FN + TN); CI – Confidence Interval.