| Literature DB >> 32195074 |
Natasha Eccles1,2, Flavio Della Sala1,2, Bryden A F Le Bailly1,3, George F S Whitehead1, Jonathan Clayden3, Simon J Webb1,2.
Abstract
Two α-aminoisobutyric acid (Aib) foldamers bearing Zn(II)-chelating N-termini have been synthesized and compared with a reported Aib foldamer that has a bis(quinolinyl)/mono(pyridyl) cap (BQPA group). Replacement of the quinolinyl arms of the BQPA-capped foldamer with pyridyl gave a BPPA-capped foldamer, then further replacement of the linking pyridyl with a 1,2,3-triazole gave a BPTA-capped foldamer. Their ability to relay chiral information from carboxylate bound to Zn(II) at the N-terminus to a glycinamide-based NMR reporter of conformational preference at the C-terminus was measured. The importance of the quinolinyl arms became readily apparent, as the foldamers with pyridyl arms were unable to report on the presence of chiral carboxylate in acetonitrile. Low solubility, X-ray crystallography and 1H NMR spectroscopy suggested that interfoldamer interactions inhibited carboxylate binding. However changing solvent to methanol revealed that the end-to-end relay of chiral information could be observed for the Zn(II) complex of the BPTA-capped foldamer at low temperature.Entities:
Keywords: molecular recognition; peptides; receptors; self-assembly; supramolecular chemistry
Year: 2020 PMID: 32195074 PMCID: PMC7080544 DOI: 10.1002/open.201900362
Source DB: PubMed Journal: ChemistryOpen ISSN: 2191-1363 Impact factor: 2.911
Figure 1Structures of Zn(1) ⋅ 2ClO4, Zn(2) ⋅ 2ClO4 and Zn(3) ⋅ 2ClO4 with bound ligand L. Structural changes from 1 are shown in red, the methylene protons in the glycinamide are shown in blue.
Scheme 1Synthesis of Zn(II) complexes of the Aib foldamers (a) Zn(2) ⋅ 2ClO4 and (b) Zn(3) ⋅ 2ClO4, starting from DPA 4 and N3Aib4GlyNH2 5.
Figure 2X‐ray crystal structure of Zn(2) ⋅ 2ClO4. (a) Side view of M helix showing the oxygen from the GlyNH2 of a neighboring foldamer bound to the Zn(II) ion. Selected hydrogen bonds shown to illustrate the hydrogen bonded network. (b) View showing the glycinamide C=O to Zn(II) interaction that gives head‐to‐tail polymers of M‐helical foldamers. Perchlorate counterions, water of solvation and hydrogens are not shown for clarity.
Figure 3Partial X‐ray crystal structures showing the geometry around the metal center for (a, b) Zn(1) ⋅ 2ClO4, (c, d) Zn(2) ⋅ 2ClO4 (glycinamide coordinated in the place of water) and (e, f) Zn(BPTA)(Aib8CH2CH2OSi(CH3)3) ⋅ 2ClO4. Some hydrogens and CH2CH2Si(CH3)3 not shown for clarity.22
Figure 4Partial 1H NMR spectra showing the aromatic region of (a) Zn(1) ⋅ 2ClO4 in CD3CN and (b) Zn(3) ⋅ 2ClO4 in CD3OD upon the incremental addition of 0 to 2 eq. Boc−D‐Pro (with 0 to 2.4 eq. 2,6‐lutidine). Starting foldamer concentration 0.015 M. The blue boxes show changes in the resonances of (a) protons on the quinolinyl 8‐positions or (b) protons on the pyridyl 2‐positions.
Figure 5(a) Partial structure showing the protons at the pyridyl 2‐positions of Zn(3) ⋅ 2ClO4. (b,c) Partial 1H NMR spectra showing the resonances from these protons in CD3OD after addition of 2 eq. (b) Boc−D‐Pro or (c) rac‐BocPro. (d) Partial structure showing methylene protons on the GlyNH2 of Zn(3) ⋅ 2ClO4. (e,f) Partial 1H VT NMR spectra from −50 to 40 °C showing these resonances in CD3OD after addition of 2 eq. (e) Boc−D‐Pro or (f) rac‐BocPro. Each foldamer 0.014 M.