Literature DB >> 32189012

A neural network approach for real-time particle/cell characterization in microfluidic impedance cytometry.

Carlos Honrado1, John S McGrath1, Riccardo Reale2, Paolo Bisegna2, Nathan S Swami3, Frederica Caselli4.   

Abstract

Microfluidic applications such as active particle sorting or selective enrichment require particle classification techniques that are capable of working in real time. In this paper, we explore the use of neural networks for fast label-free particle characterization during microfluidic impedance cytometry. A recurrent neural network is designed to process data from a novel impedance chip layout for enabling real-time multiparametric analysis of the measured impedance data streams. As demonstrated with both synthetic and experimental datasets, the trained network is able to characterize with good accuracy size, velocity, and cross-sectional position of beads, red blood cells, and yeasts, with a unitary prediction time of 0.4 ms. The proposed approach can be extended to other device designs and cell types for electrical parameter extraction. This combination of microfluidic impedance cytometry and machine learning can serve as a stepping stone to real-time single-cell analysis and sorting. Graphical Abstract.

Entities:  

Keywords:  Microfluidic impedance cytometry; Multiparametric characterization; Neural networks; Real-time processing; Single-cell analysis

Mesh:

Year:  2020        PMID: 32189012     DOI: 10.1007/s00216-020-02497-9

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  9 in total

1.  Multiplexed assessment of engineered bacterial constructs for intracellular β-galactosidase expression by redox amplification on catechol-chitosan modified nanoporous gold.

Authors:  Yi Liu; John H Moore; Svetlana Harbaugh; Jorge Chavez; Chia-Fu Chou; Nathan S Swami
Journal:  Mikrochim Acta       Date:  2021-12-02       Impact factor: 5.833

2.  Aluminum Oxide-Coated Particle Differentiation Employing Supervised Machine Learning and Impedance Cytometry.

Authors:  Brandon K Ashley; Jianye Sui; Mehdi Javanmard; Umer Hassan
Journal:  IEEE Int Conf Nano Micro Eng Mol Syst       Date:  2022-06-10

3.  Self-aligned sequential lateral field non-uniformities over channel depth for high throughput dielectrophoretic cell deflection.

Authors:  XuHai Huang; Karina Torres-Castro; Walter Varhue; Armita Salahi; Ahmed Rasin; Carlos Honrado; Audrey Brown; Jennifer Guler; Nathan S Swami
Journal:  Lab Chip       Date:  2021-03-09       Impact factor: 6.799

4.  Single-cell microfluidic impedance cytometry: from raw signals to cell phenotypes using data analytics.

Authors:  Carlos Honrado; Paolo Bisegna; Nathan S Swami; Federica Caselli
Journal:  Lab Chip       Date:  2021-01-05       Impact factor: 6.799

5.  Modified Red Blood Cells as Multimodal Standards for Benchmarking Single-Cell Cytometry and Separation Based on Electrical Physiology.

Authors:  Armita Salahi; Carlos Honrado; Aditya Rane; Federica Caselli; Nathan S Swami
Journal:  Anal Chem       Date:  2022-02-02       Impact factor: 6.986

6.  Neural Network-Based Optimization of an Acousto Microfluidic System for Submicron Bioparticle Separation.

Authors:  Bahram Talebjedi; Mohammadamin Heydari; Erfan Taatizadeh; Nishat Tasnim; Isaac T S Li; Mina Hoorfar
Journal:  Front Bioeng Biotechnol       Date:  2022-04-19

Review 7.  Insulator Based Dielectrophoresis: Micro, Nano, and Molecular Scale Biological Applications.

Authors:  Prateek Benhal; David Quashie; Yoontae Kim; Jamel Ali
Journal:  Sensors (Basel)       Date:  2020-09-07       Impact factor: 3.576

Review 8.  Machine Learning-Driven Multiobjective Optimization: An Opportunity of Microfluidic Platforms Applied in Cancer Research.

Authors:  Yi Liu; Sijing Li; Yaling Liu
Journal:  Cells       Date:  2022-03-05       Impact factor: 6.600

9.  Optimization of Microchannels and Application of Basic Activation Functions of Deep Neural Network for Accuracy Analysis of Microfluidic Parameter Data.

Authors:  Feroz Ahmed; Masashi Shimizu; Jin Wang; Kenji Sakai; Toshihiko Kiwa
Journal:  Micromachines (Basel)       Date:  2022-08-20       Impact factor: 3.523

  9 in total

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