Literature DB >> 32185378

Whole Genome Sequencing Detects Minimal Clustering Among Escherichia coli Sequence Type 131-H30 Isolates Collected From United States Children's Hospitals.

Arianna Miles-Jay1,2, Scott J Weissman2,3, Amanda L Adler2, Janet G Baseman1, Danielle M Zerr2,3.   

Abstract

We applied whole genome sequencing to identify putative transmission clusters among clinical multidrug-resistant Escherichia coli sequence type 131-H30 isolates from 4 United States children's hospitals. Of 126 isolates, 17 were involved in 8 putative transmission clusters; 4 clusters showed evidence of healthcare-associated epidemiologic linkages. Geographic clustering analyses showed weak geographic clustering.
© The Author(s) 2020. Published by Oxford University Press on behalf of The Journal of the Pediatric Infectious Diseases Society. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  zzm321990 E coli infections; ST131; antimicrobial resistance

Year:  2021        PMID： 32185378      PMCID： PMC7996643          DOI： 10.1093/jpids/piaa023

Source DB:  PubMed          Journal:  J Pediatric Infect Dis Soc        ISSN： 2048-7193            Impact factor:   3.164


  17 in total

1.  High-resolution two-locus clonal typing of extraintestinal pathogenic Escherichia coli.

Authors:  Scott J Weissman; James R Johnson; Veronika Tchesnokova; Mariya Billig; Daniel Dykhuizen; Kim Riddell; Peggy Rogers; Xuan Qin; Susan Butler-Wu; Brad T Cookson; Ferric C Fang; Delia Scholes; Sujay Chattopadhyay; Evgeni Sokurenko
Journal:  Appl Environ Microbiol       Date:  2012-01-06       Impact factor: 4.792

Review 2.  Medical and economic impact of extraintestinal infections due to Escherichia coli: focus on an increasingly important endemic problem.

Authors:  Thomas A Russo; James R Johnson
Journal:  Microbes Infect       Date:  2003-04       Impact factor: 2.700

3.  Previous Antibiotic Exposure Increases Risk of Infection with Extended-Spectrum-β-Lactamase- and AmpC-Producing Escherichia coli and Klebsiella pneumoniae in Pediatric Patients.

Authors:  Danielle M Zerr; Arianna Miles-Jay; Matthew P Kronman; Chuan Zhou; Amanda L Adler; Wren Haaland; Scott J Weissman; Alexis Elward; Jason G Newland; Theoklis Zaoutis; Xuan Qin
Journal:  Antimicrob Agents Chemother       Date:  2016-06-20       Impact factor: 5.191

4.  Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli.

Authors:  James R Johnson; Veronika Tchesnokova; Brian Johnston; Connie Clabots; Pacita L Roberts; Mariya Billig; Kim Riddell; Peggy Rogers; Xuan Qin; Susan Butler-Wu; Lance B Price; Maliha Aziz; Marie-Hélène Nicolas-Chanoine; Chitrita Debroy; Ari Robicsek; Glen Hansen; Carl Urban; Joanne Platell; Darren J Trott; George Zhanel; Scott J Weissman; Brad T Cookson; Ferric C Fang; Ajit P Limaye; Delia Scholes; Sujay Chattopadhyay; David C Hooper; Evgeni V Sokurenko
Journal:  J Infect Dis       Date:  2013-01-03       Impact factor: 5.226

5.  A multicentre cohort study on colonization and infection with ESBL-producing Enterobacteriaceae in high-risk patients with haematological malignancies.

Authors:  Maria J G T Vehreschild; Axel Hamprecht; Lisa Peterson; Sören Schubert; Maik Häntschel; Silke Peter; Philippe Schafhausen; Holger Rohde; Marie V Lilienfeld-Toal; Isabelle Bekeredjian-Ding; Johannes Libam; Martin Hellmich; Jörg J Vehreschild; Oliver A Cornely; Harald Seifert
Journal:  J Antimicrob Chemother       Date:  2014-08-06       Impact factor: 5.790

6.  Analysis of β-Lactamase Resistance Determinants in Enterobacteriaceae from Chicago Children: a Multicenter Survey.

Authors:  Latania K Logan; Andrea M Hujer; Steven H Marshall; T Nicholas Domitrovic; Susan D Rudin; Xiaotian Zheng; Nadia K Qureshi; Mary K Hayden; Felicia A Scaggs; Anand Karadkhele; Robert A Bonomo
Journal:  Antimicrob Agents Chemother       Date:  2016-05-23       Impact factor: 5.191

7.  Epidemiology and Antimicrobial Resistance Characteristics of the Sequence Type 131-H30 Subclone Among Extraintestinal Escherichia coli Collected From US Children.

Authors:  Arianna Miles-Jay; Scott J Weissman; Amanda L Adler; Veronika Tchesnokova; Evgeni V Sokurenko; Janet G Baseman; Danielle M Zerr
Journal:  Clin Infect Dis       Date:  2018-01-18       Impact factor: 9.079

8.  Extended-spectrum β-lactamase-producing Escherichia coli in human-derived and foodchain-derived samples from England, Wales, and Scotland: an epidemiological surveillance and typing study.

Authors:  Michaela J Day; Katie L Hopkins; David W Wareham; Mark A Toleman; Nicola Elviss; Luke Randall; Christopher Teale; Paul Cleary; Camilla Wiuff; Michel Doumith; Matthew J Ellington; Neil Woodford; David M Livermore
Journal:  Lancet Infect Dis       Date:  2019-10-22       Impact factor: 25.071

9.  The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone.

Authors:  Brian M Forde; Nouri L Ben Zakour; Mitchell Stanton-Cook; Minh-Duy Phan; Makrina Totsika; Kate M Peters; Kok Gan Chan; Mark A Schembri; Mathew Upton; Scott A Beatson
Journal:  PLoS One       Date:  2014-08-15       Impact factor: 3.240

10.  Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread.

Authors:  David W Eyre; Kerrie A Davies; Georgina Davis; Warren N Fawley; Kate E Dingle; Nicola De Maio; Andreas Karas; Derrick W Crook; Tim E A Peto; A Sarah Walker; Mark H Wilcox
Journal:  Clin Infect Dis       Date:  2018-09-14       Impact factor: 9.079
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  3 in total

1.  Comparison of Whole-Genome Sequence-Based Methods and PCR Ribotyping for Subtyping of Clostridioides difficile.

Authors:  A Baktash; J Corver; C Harmanus; W K Smits; W Fawley; M H Wilcox; N Kumar; D W Eyre; A Indra; A Mellmann; E J Kuijper
Journal:  J Clin Microbiol       Date:  2021-12-15       Impact factor: 11.677

2.  Whole-Genome Sequencing Surveillance and Machine Learning of the Electronic Health Record for Enhanced Healthcare Outbreak Detection.

Authors:  Alexander J Sundermann; Jieshi Chen; Praveen Kumar; Ashley M Ayres; Shu Ting Cho; Chinelo Ezeonwuka; Marissa P Griffith; James K Miller; Mustapha M Mustapha; A William Pasculle; Melissa I Saul; Kathleen A Shutt; Vatsala Srinivasa; Kady Waggle; Daniel J Snyder; Vaughn S Cooper; Daria Van Tyne; Graham M Snyder; Jane W Marsh; Artur Dubrawski; Mark S Roberts; Lee H Harrison
Journal:  Clin Infect Dis       Date:  2022-08-31       Impact factor: 20.999

3.  Convergence of virulence and antimicrobial resistance in increasingly prevalent Escherichia coli ST131 papGII+ sublineages.

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Journal:  Commun Biol       Date:  2022-07-28
  3 in total

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