| Literature DB >> 32185303 |
Panagiotis K Panagopoulos1, George I Lambrou1,2.
Abstract
BACKGROUND: Osteoarthritis (OA) is the most common chronic joint disease and it may progressively cause disability and compromise quality of life. Lately, the role of miRNAs in the pathogenesis of OA has drawn a lot of attention. miRNAs are small, single-stranded, non-coding molecules of RNA which regulate gene expression at post-transcriptional level. The dysregulation of the expression of several miRNAs affects pathways involved in OA pathogenesis.Entities:
Keywords: dysregulation; epigenetics; miRNAs; osteoarthritis
Year: 2018 PMID: 32185303 PMCID: PMC7046075 DOI: 10.31138/mjr.29.2.67
Source DB: PubMed Journal: Mediterr J Rheumatol ISSN: 2529-198X
MicroRNAs dysregulated in OA and their target genes.
| miR-9 | MCPIP1 | Makki, Haseeb et al. 2015[ |
| PTRG | Song, Kim, Chun et al. 2013[ | |
| miR-15a-5p | VEGFA | Chen et al. 2017[ |
| miR-16-5p | Li L et al. 2015[ | |
| miR-21 | Zhang et al. 2014[ | |
| Song et al. 2014[ | ||
| miR-23a-3p | Kang et al. 2016[ | |
| miR-24 | Philipot et al. 2014[ | |
| miR-26a | iNOS | Rasheed et al. 2016[ |
| KPNA3 | Yin et al. 2017[ | |
| miR-26b | KPNA3 | Yin et al. 2017[ |
| miR-27b | Akhtar et al. 2010[ | |
| miR-29 | Smad, NFκB, and canonical Wnt signaling | Le et al. 2016[ |
| miR-30a | Ji, Xu, Zhang et al. 2016[ | |
| miR-30b | ERG | Li, Yang et al. 2015[ |
| miR-33 | CCL2 | Wei et al. 2016[ |
| miR-33a | Kostopoulou et al. 2015[ | |
| mir-34a | SIRT1 | Yan et al. 2016[ |
| miR-98 | - | Wang GL et al. 2016[ |
| miR-105 | Runx2 | Ji, Xu, Xu et al. 2016[ |
| miR-122 | Yang et al. 2015[ | |
| miR-125b | Matsukawa et al. 2013[ | |
| miR-127 | OPN | Tu et al. 2016[ |
| miR-130 | TNFA | Li ZC et al. 2015[ |
| miR-139 | MCPIP1 | Makki and Haqqi, 2015[ |
| EIF4G2, IGF1R | Hu et al. 2016[ | |
| miR-140 | Miyaki et al. 2009,[ | |
| Tardif et al. 2009[ | ||
| Liang et al. 2012,[ | ||
| miR-142-3p | HMGB1 | Wang X et al. 2016[ |
| miR-146 | Yamasaki et al. 2009[ | |
| Li et al. 2011[ | ||
| Li et al. 2012[ | ||
| miR-148 | Vonk et al. 2014[ | |
| miR-149 | Santini et al. 2014[ | |
| miR-155 | D’ Adamo et al. 2016[ | |
| miR-181 | PTEN | Wu et al. 2017[ |
| miR-210 | Zhang et al. 2015[ | |
| HIF-3α | Li Z et al. 2016[ | |
| miR-222 | HDAC-4 | Song, Jin et al. 2015[ |
| miR-335 | - | Tornero-Esteban et al. 2014[ |
| miR-370 | SHMT-2 | Song, Kim et al. 2015[ |
| miR-373 | MECP-2 | Song, Kim et al. 2015[ |
| miR-381a-3p | IkBα | Xia et al. 2016[ |
| miR-483-5p | Wang et al. 2017[ | |
| miR-488 | Song, Kim, Lee et al. 2013[ | |
| miR-558 | Park et al. 2013[ | |
| miR-634 | PIK3R1 | Cui et al. 2016[ |
Each microRNA is reported with its respective target genes and the bibliographical reference where the information was obtained.
High-throughput methods used in OA literature.
| Jones et al. 2009[ | Cartilage and subchondral bone from OA vs normal joints | 4/4 | Microarrays (157 miRNAs) | 47 differentially expressed miRNAs |
| Iliopoulos et al. 2008[ | Cultured chondrocytes from OA vs normal cartilage | 33/10 | Microarrays (365 miRNAs) | 11 differentially expressed miRNAs |
| Swingler et al. 2012[ | Discovery: Cultured chondrocytes Validation: Cartilage from OA vs normal joints | 10/10 | Discovery: Microarrays Validation: RT-PCR | 39 miRNAs differentially expressed during chondrogenesis |
| Diaz-Prado et al. 2012[ | Cultured chondrocytes from OA vs normal cartilage | 6/4 | Microarrays (723 miRNAs) | 7 differentially expressed miRNAs |
| Tornero-Estaban et al. 2015[ | Cultures of bone marrow mesenchymal stem cells from OA patients vs controls | 10/10 | Microarrays (754 miRNAs) | 246 differentially expressed miRNAs |
| Crowe et al. 2016[ | Discovery: Cartilage from OA joints Validation: Cartilage from OA vs normal joints | 11/6 | Discovery: Next generation RNA-sequencing | 60 new miRNAs expressed in OA cartilage |
| Li YH et al. 2016[ | Synovial fluid from late-stage vs early-stage OA joints | 4/4 | Validation: RT-PCR Microarrays (752 miRNAs) | miRNAs 7 differentially expressed miRNAs |
| Rasheed et al. 2016[ | Cultured chondrocytes from OA cartilage, stimulated or not with IL-1β | Unknown | Microarrays (1347 miRNAs) | 36 differentially expressed miRNAs |
Studies that used high-throughput methods in order to examine the profile of multiple miRNAs expressed in cartilage, subchondral bone and synovial fluid of osteoarthritic joints.
| miRNAs | Micro RNAs |
| Osteoarthritis | OA |
| mRNA | Messenger RNA |
| 3′-UTR | 3′-untranslated region |
| MMPs | Metalloproteinases |
| NSAIDS | Nonsteroidal anti-inflammatory drugs |
| MMPs | Matrix Metalloproteinases |
| GWAS | Genome Wide Association Studies |
| 3′-UTR | 3′-Untranslated Region |
| HDL | High Density Lipoprotein |
| TGF-β | Transforming Growth Factor-β |
| RALA | RAS like proto-oncogene A |
| SOX9 | SRY-box 9 |
| SMAD3 | SMAD family member 3 |
| ADAMTS5 | ADAM Metallopeptidase with Thrombospondin Type 1 Motif 5 |
| MMP13 | Matrix Metalloproteinase 13 |
| IGFBP5 | Insulin Like Growth Factor Binding Protein 5 |
| RALA | RAS like proto-oncogene A |
| VEGF | Vascular Endothelial Growth Factor |
| SMAD3 | SMAD family member 3 |
| TGF-β | Transforming Growth Factor-β |
| KPNA3 | Karyopherin Subunit Alpha 3 |
| NF-κB | Nuclear Factor-κB |
| iNOS | Nitric Oxide Synthase |
| NO | Nitric Oxide |
| HMGB1 | High Mobility Group Box 1 |
| DR6 | Death Receptor 6 |
| TNF-α | Tumor Necrosis Factor alpha |
| IL-8 | Interleukin 8 |
| IL-6 | Interleukin 6 |
| MCPIP-1 | Monocyte Chemoattractant Protein–Induced Protein 1 |
| IκBα | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| SIRT1 | Silent Information Regulator 1 |
| HDAC-4 | Histone Deacetylase 4 |
| HIF-1α | Hypoxia-Inducible Factor 1 alpha |
| Bax | BCL2 associated X, apoptosis regulator |
| Bcl-2 | B cell leukemia/lymphoma 2 |
| ATG3 | autophagy related 3 |
| ATG14 | autophagy related 14 |
| MAP1LC3 | microtubule-associated protein 1 light chain 3 beta |
| ULK1 | unc-51 like autophagy activating kinase 1 |
| GABARAPL1 | GABA type A receptor associated protein like 1 |
| ATG5 | autophagy related 5 |
| ATG2B | autophagy related 2B |
| LAMP2 | lysosomal associated membrane protein 2 |
| FOXO3 | forkhead box O3 |
| GAS5 | Growth arrest-specific 5 |
| NSAIDS | Nonsteroidal Anti-Inflammatory Drugs |