Literature DB >> 32182034

Designer Palmitoylation Motif-Based Self-Localizing Ligand for Sustained Control of Protein Localization in Living Cells and Caenorhabditis elegans.

Akinobu Nakamura1, Choji Oki2, Shunsuke Sawada2, Tatsuyuki Yoshii1,3, Keiko Kuwata4, Andrew K Rudd5, Neal K Devaraj5, Kentaro Noma3,6, Shinya Tsukiji1,2,7.   

Abstract

Inducing protein translocation to the plasma membrane (PM) is an important approach for manipulating diverse signaling molecules/pathways in living cells. We previously devised a new chemogenetic system, in which a protein fused to Escherichia coli dihydrofolate reductase (eDHFR) can be rapidly translocated from the cytoplasm to the PM using a trimethoprim (TMP)-based self-localizing ligand (SL), mgcTMP. However, mgcTMP-induced protein translocation turned out to be transient and spontaneously reversed within 1 h, limiting its application. Here, we first demonstrated that the spontaneous reverse translocation was caused by cellular degradation of mgcTMP, presumably by proteases. To address this problem, we newly developed a proteolysis-resistant SL, mDcTMP. This mDcTMP now allows sustained PM localization of eDHFR-fusion proteins (over several hours to a day), and it was applicable to inducing prolonged signal activation and cell differentiation. mDcTMP also worked in live nematodes, making it an attractive new tool for probing and controlling living systems.

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Year:  2020        PMID: 32182034      PMCID: PMC8849012          DOI: 10.1021/acschembio.0c00014

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  26 in total

1.  Synthetic self-localizing ligands that control the spatial location of proteins in living cells.

Authors:  Manabu Ishida; Hideaki Watanabe; Kazumasa Takigawa; Yasutaka Kurishita; Choji Oki; Akinobu Nakamura; Itaru Hamachi; Shinya Tsukiji
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

2.  2-Bromopalmitoyl-CoA and 2-bromopalmitate: promiscuous inhibitors of membrane-bound enzymes.

Authors:  R A Coleman; P Rao; R J Fogelsong; E S Bardes
Journal:  Biochim Biophys Acta       Date:  1992-04-23

3.  Multiplexed Fluorescence Imaging of ERK and Akt Activities and Cell-cycle Progression.

Authors:  Gembu Maryu; Michiyuki Matsuda; Kazuhiro Aoki
Journal:  Cell Struct Funct       Date:  2016-05-28       Impact factor: 2.212

4.  Requirement for Ras in Raf activation is overcome by targeting Raf to the plasma membrane.

Authors:  S J Leevers; H F Paterson; C J Marshall
Journal:  Nature       Date:  1994-06-02       Impact factor: 49.962

5.  Partial D-amino acid substitution: Improved enzymatic stability and preserved Ab recognition of a MUC2 epitope peptide.

Authors:  Regina Tugyi; Katalin Uray; Dóra Iván; Erzsébet Fellinger; Alan Perkins; Ferenc Hudecz
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-03       Impact factor: 11.205

Review 6.  Specificity of receptor tyrosine kinase signaling: transient versus sustained extracellular signal-regulated kinase activation.

Authors:  C J Marshall
Journal:  Cell       Date:  1995-01-27       Impact factor: 41.582

7.  Rapamycin-induced protein dimerization as a tool for C. elegans research​.

Authors:  Sriyash Mangal; Jeffrey Zielich; Eric Lambie; Esther Zanin
Journal:  MicroPubl Biol       Date:  2018-03-20

8.  Cell fate decisions are specified by the dynamic ERK interactome.

Authors:  Daniela Baiocchi; Marc Birtwistle; Alex von Kriegsheim; David Sumpton; Willy Bienvenut; Nicholas Morrice; Kayo Yamada; Angus Lamond; Gabriella Kalna; Richard Orton; David Gilbert; Walter Kolch
Journal:  Nat Cell Biol       Date:  2009-11-22       Impact factor: 28.824

9.  A method to rapidly create protein aggregates in living cells.

Authors:  Yusuke Miyazaki; Kota Mizumoto; Gautam Dey; Takamasa Kudo; John Perrino; Ling-Chun Chen; Tobias Meyer; Thomas J Wandless
Journal:  Nat Commun       Date:  2016-05-27       Impact factor: 14.919

10.  Tunable light and drug induced depletion of target proteins.

Authors:  Wen Deng; Jack A Bates; Hai Wei; Michael D Bartoschek; Barbara Conradt; Heinrich Leonhardt
Journal:  Nat Commun       Date:  2020-01-16       Impact factor: 14.919

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  2 in total

Review 1.  Protein Palmitoylation Modification During Viral Infection and Detection Methods of Palmitoylated Proteins.

Authors:  Xiaoling Li; Lingyi Shen; Zhao Xu; Wei Liu; Aihua Li; Jun Xu
Journal:  Front Cell Infect Microbiol       Date:  2022-01-27       Impact factor: 5.293

Review 2.  Chemogenetics of cell surface receptors: beyond genetic and pharmacological approaches.

Authors:  Yuta Miura; Akinobu Senoo; Tomohiro Doura; Shigeki Kiyonaka
Journal:  RSC Chem Biol       Date:  2022-01-27
  2 in total

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