Literature DB >> 19935650

Cell fate decisions are specified by the dynamic ERK interactome.

Daniela Baiocchi1, Marc Birtwistle1, Alex von Kriegsheim1, David Sumpton1, Willy Bienvenut1, Nicholas Morrice2, Kayo Yamada3, Angus Lamond3, Gabriella Kalna1, Richard Orton4, David Gilbert5, Walter Kolch1,4.   

Abstract

Extracellular signal-regulated kinase (ERK) controls fundamental cellular functions, including cell fate decisions. In PC12, cells shifting ERK activation from transient to sustained induces neuronal differentiation. As ERK associates with both regulators and effectors, we hypothesized that the mechanisms underlying the switch could be revealed by assessing the dynamic changes in ERK-interacting proteins that specifically occur under differentiation conditions. Using quantitative proteomics, we identified 284 ERK-interacting proteins. Upon induction of differentiation, 60 proteins changed their binding to ERK, including many proteins that were not known to participate in differentiation. We functionally characterized a subset, showing that they regulate the pathway at several levels and by different mechanisms, including signal duration, ERK localization, feedback, crosstalk with the Akt pathway and differential interaction and phosphorylation of transcription factors. Integrating these data with a mathematical model confirmed that ERK dynamics and differentiation are regulated by distributed control mechanisms rather than by a single master switch.

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Year:  2009        PMID: 19935650      PMCID: PMC3839079          DOI: 10.1038/ncb1994

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  32 in total

1.  PEA-15 mediates cytoplasmic sequestration of ERK MAP kinase.

Authors:  E Formstecher; J W Ramos; M Fauquet; D A Calderwood; J C Hsieh; B Canton; X T Nguyen; J V Barnier; J Camonis; M H Ginsberg; H Chneiweiss
Journal:  Dev Cell       Date:  2001-08       Impact factor: 12.270

2.  ERF nuclear shuttling, a continuous monitor of Erk activity that links it to cell cycle progression.

Authors:  Lionel Le Gallic; Laura Virgilio; Philip Cohen; Benoit Biteau; George Mavrothalassitis
Journal:  Mol Cell Biol       Date:  2004-02       Impact factor: 4.272

3.  Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.

Authors:  John C Obenauer; Lewis C Cantley; Michael B Yaffe
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 4.  GATA transcription factors in hematologic disease.

Authors:  Alan B Cantor
Journal:  Int J Hematol       Date:  2005-06       Impact factor: 2.490

Review 5.  GATA factors in vertebrate heart development and disease.

Authors:  Alison Brewer; John Pizzey
Journal:  Expert Rev Mol Med       Date:  2006-09-15       Impact factor: 5.600

6.  Missense mutation of TRPS1 in a family of tricho-rhino-phalangeal syndrome type III.

Authors:  Hiromasa Kobayashi; Megumu Hino; Makiko Shimodahira; Toshio Iwakura; Takashi Ishihara; Katsuji Ikekubo; Yoshihiro Ogawa; Kazuwa Nakao; Hiroyuki Kurahachi
Journal:  Am J Med Genet       Date:  2002-01-01

7.  Prediction and validation of the distinct dynamics of transient and sustained ERK activation.

Authors:  Satoru Sasagawa; Yu-ichi Ozaki; Kazuhiro Fujita; Shinya Kuroda
Journal:  Nat Cell Biol       Date:  2005-03-27       Impact factor: 28.824

8.  Growth factor-induced MAPK network topology shapes Erk response determining PC-12 cell fate.

Authors:  Silvia D M Santos; Peter J Verveer; Philippe I H Bastiaens
Journal:  Nat Cell Biol       Date:  2007-02-18       Impact factor: 28.824

9.  Transcriptional repression and developmental functions of the atypical vertebrate GATA protein TRPS1.

Authors:  T H Malik; S A Shoichet; P Latham; T G Kroll; L L Peters; R A Shivdasani
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

Review 10.  Raf kinases: function, regulation and role in human cancer.

Authors:  Deborah T Leicht; Vitaly Balan; Alexander Kaplun; Vinita Singh-Gupta; Ludmila Kaplun; Melissa Dobson; Guri Tzivion
Journal:  Biochim Biophys Acta       Date:  2007-05-22
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  123 in total

1.  VRK2 anchors KSR1-MEK1 to endoplasmic reticulum forming a macromolecular complex that compartmentalizes MAPK signaling.

Authors:  Isabel F Fernández; Luis G Pérez-Rivas; Sandra Blanco; Adrián A Castillo-Dominguez; José Lozano; Pedro A Lazo
Journal:  Cell Mol Life Sci       Date:  2012-07-04       Impact factor: 9.261

Review 2.  Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry.

Authors:  Robyn M Kaake; Xiaorong Wang; Lan Huang
Journal:  Mol Cell Proteomics       Date:  2010-05-05       Impact factor: 5.911

Review 3.  Decoding signalling networks by mass spectrometry-based proteomics.

Authors:  Chunaram Choudhary; Matthias Mann
Journal:  Nat Rev Mol Cell Biol       Date:  2010-05-12       Impact factor: 94.444

4.  c-Abl promotes osteoblast expansion by differentially regulating canonical and non-canonical BMP pathways and p16INK4a expression.

Authors:  Hui-Yi Kua; Huijuan Liu; Wai Fook Leong; Lili Li; Deyong Jia; Gang Ma; Yuanyu Hu; Xueying Wang; Jenny F L Chau; Ye-Guang Chen; Yuji Mishina; Sharon Boast; James Yeh; Li Xia; Guo-Qiang Chen; Lin He; Stephen P Goff; Baojie Li
Journal:  Nat Cell Biol       Date:  2012-06-24       Impact factor: 28.824

5.  MAPK substrate competition integrates patterning signals in the Drosophila embryo.

Authors:  Yoosik Kim; Mathieu Coppey; Rona Grossman; Leiore Ajuria; Gerardo Jiménez; Ze'ev Paroush; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2010-02-18       Impact factor: 10.834

6.  Pseudophosphatase STYX modulates cell-fate decisions and cell migration by spatiotemporal regulation of ERK1/2.

Authors:  Veronika Reiterer; Dirk Fey; Walter Kolch; Boris N Kholodenko; Hesso Farhan
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-11       Impact factor: 11.205

Review 7.  Receptor tyrosine kinase (RTK) signalling in the control of neural stem and progenitor cell (NSPC) development.

Authors:  Alexander Annenkov
Journal:  Mol Neurobiol       Date:  2013-08-28       Impact factor: 5.590

8.  Bradykinin promotes neuron-generating division of neural progenitor cells through ERK activation.

Authors:  Micheli M Pillat; Claudiana Lameu; Cleber A Trujillo; Talita Glaser; Angélica R Cappellari; Priscilla D Negraes; Ana M O Battastini; Telma T Schwindt; Alysson R Muotri; Henning Ulrich
Journal:  J Cell Sci       Date:  2016-08-15       Impact factor: 5.285

Review 9.  The Role of PI3K/Akt and ERK in Neurodegenerative Disorders.

Authors:  Sachchida Nand Rai; Hagera Dilnashin; Hareram Birla; Saumitra Sen Singh; Walia Zahra; Aaina Singh Rathore; Brijesh Kumar Singh; Surya Pratap Singh
Journal:  Neurotox Res       Date:  2019-02-01       Impact factor: 3.911

10.  Activation of MEK/ERK Signaling by PACAP in Guinea Pig Cardiac Neurons.

Authors:  Todd A Clason; Beatrice M Girard; Victor May; Rodney L Parsons
Journal:  J Mol Neurosci       Date:  2016-05-18       Impact factor: 3.444

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