Literature DB >> 32176487

Peculiarities of the Mean Transition Path Time Dependence on the Barrier Height in Entropy Potentials.

Alexander M Berezhkovskii1,2, Leonardo Dagdug3, Sergey M Bezrukov1.   

Abstract

A transition path is a part of a one-dimensional trajectory of a diffusing particle, which starts from point a and is terminated as soon as it comes to point b for the first time. It is the trajectory's final segment that leaves point a and goes to point b without returning to point a. The duration of this segment is called transition path time or, alternatively, direct transit time. We study the mean transition path time in monotonically increasing entropy potentials of the narrowing cones in spaces of different dimensions. We find that this time, normalized to its value in the absence of the potential, monotonically increases with the barrier height for the entropy potential of a narrowing two-dimensional cone, is independent of the barrier height for a narrowing three-dimensional cone, and monotonically decreases with the barrier height for narrowing cones in spaces of higher dimensions. Moreover, we show that as the barrier height tends to infinity, the normalized mean transition path time approaches its universal limiting value n/3, where n = 2, 3, 4, ... is the space dimension. This is in sharp contrast to the asymptotic behavior of this quantity in the case of a linear potential of mean force, for which it approaches zero in this limit.

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Year:  2020        PMID: 32176487      PMCID: PMC9004286          DOI: 10.1021/acs.jpcb.9b09595

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  20 in total

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8.  First passage, looping, and direct transition in expanding and narrowing tubes: Effects of the entropy potential.

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10.  Fast single-molecule FRET spectroscopy: theory and experiment.

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  1 in total

1.  Enhancing carrier flux for efficient drug delivery in cancer tissues.

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  1 in total

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