Literature DB >> 32152587

Structural insights into influenza A virus ribonucleoproteins reveal a processive helical track as transcription mechanism.

Rocío Coloma1, Rocío Arranz1, José M de la Rosa-Trevín1,2, Carlos O S Sorzano1, Sandie Munier3,4,5, Diego Carlero1, Nadia Naffakh3,4,5, Juan Ortín6, Jaime Martín-Benito7.   

Abstract

The influenza virus genome consists of eight viral ribonucleoproteins (vRNPs), each consisting of a copy of the polymerase, one of the genomic RNA segments and multiple copies of the nucleoprotein arranged in a double helical conformation. vRNPs are macromolecular machines responsible for messenger RNA synthesis and genome replication, that is, the formation of progeny vRNPs. Here, we describe the structural basis of the transcription process. The mechanism, which we call the 'processive helical track', is based on the extreme flexibility of the helical part of the vRNP that permits a sliding movement between both antiparallel nucleoprotein-RNA strands, thereby allowing the polymerase to move over the genome while bound to both RNA ends. Accordingly, we demonstrate that blocking this movement leads to inhibition of vRNP transcriptional activity. This mechanism also reveals a critical role of the nucleoprotein in maintaining the double helical structure throughout the copying process to make the RNA template accessible to the polymerase.

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Year:  2020        PMID: 32152587     DOI: 10.1038/s41564-020-0675-3

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  50 in total

1.  Ultrastructural and functional analyses of recombinant influenza virus ribonucleoproteins suggest dimerization of nucleoprotein during virus amplification.

Authors:  J Ortega; J Martín-Benito; T Zürcher; J M Valpuesta; J L Carrascosa; J Ortín
Journal:  J Virol       Date:  2000-01       Impact factor: 5.103

2.  Influenza virus infection causes specific degradation of the largest subunit of cellular RNA polymerase II.

Authors:  A Rodriguez; A Pérez-González; A Nieto
Journal:  J Virol       Date:  2007-03-07       Impact factor: 5.103

3.  The structure of native influenza virion ribonucleoproteins.

Authors:  Rocío Arranz; Rocío Coloma; Francisco Javier Chichón; José Javier Conesa; José L Carrascosa; José M Valpuesta; Juan Ortín; Jaime Martín-Benito
Journal:  Science       Date:  2012-11-22       Impact factor: 47.728

4.  Globin mRNAs are primers for the transcription of influenza viral RNA in vitro.

Authors:  M Bouloy; S J Plotch; R M Krug
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

5.  Structural basis of an essential interaction between influenza polymerase and Pol II CTD.

Authors:  Maria Lukarska; Guillaume Fournier; Alexander Pflug; Patricia Resa-Infante; Stefan Reich; Nadia Naffakh; Stephen Cusack
Journal:  Nature       Date:  2016-12-21       Impact factor: 49.962

6.  The mechanism by which influenza A virus nucleoprotein forms oligomers and binds RNA.

Authors:  Qiaozhen Ye; Robert M Krug; Yizhi Jane Tao
Journal:  Nature       Date:  2006-12-06       Impact factor: 49.962

Review 7.  At the centre: influenza A virus ribonucleoproteins.

Authors:  Amie J Eisfeld; Gabriele Neumann; Yoshihiro Kawaoka
Journal:  Nat Rev Microbiol       Date:  2014-11-24       Impact factor: 60.633

8.  Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design.

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Journal:  FASEB J       Date:  2008-07-09       Impact factor: 5.191

9.  A Mechanism for the Activation of the Influenza Virus Transcriptase.

Authors:  Itziar Serna Martin; Narin Hengrung; Max Renner; Jane Sharps; Mónica Martínez-Alonso; Simonas Masiulis; Jonathan M Grimes; Ervin Fodor
Journal:  Mol Cell       Date:  2018-06-14       Impact factor: 17.970

10.  Association of the influenza A virus RNA-dependent RNA polymerase with cellular RNA polymerase II.

Authors:  Othmar G Engelhardt; Matt Smith; Ervin Fodor
Journal:  J Virol       Date:  2005-05       Impact factor: 5.103

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2.  Type B and type A influenza polymerases have evolved distinct binding interfaces to recruit the RNA polymerase II CTD.

Authors:  Tim Krischuns; Catherine Isel; Petra Drncova; Maria Lukarska; Alexander Pflug; Sylvain Paisant; Vincent Navratil; Stephen Cusack; Nadia Naffakh
Journal:  PLoS Pathog       Date:  2022-05-23       Impact factor: 7.464

3.  Anti-Influenza Drug Discovery and Development: Targeting the Virus and Its Host by All Possible Means.

Authors:  Olivier Terrier; Anny Slama-Schwok
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

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5.  Inferring Protein Function in an Emerging Virus: Detection of the Nucleoprotein in Tilapia Lake Virus.

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Review 6.  Brothers in Arms: Structure, Assembly and Function of Arenaviridae Nucleoprotein.

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7.  Modeling the zzm321990 Influenza Azzm321990 NP-vRNA-Polymerase Complex in Atomic Detail.

Authors:  Jacob C Miner; Anna Lappala; Paul W Fenimore; William M Fischer; Benjamin H McMahon; Nicolas W Hengartner; Karissa Y Sanbonmatsu; Chang-Shung Tung
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8.  Mutation of an Influenza Virus Polymerase 3' RNA Promoter Binding Site Inhibits Transcription Elongation.

Authors:  Alexander P Walker; Jane Sharps; Ervin Fodor
Journal:  J Virol       Date:  2020-06-16       Impact factor: 5.103

9.  Ultrastructure of influenza virus ribonucleoprotein complexes during viral RNA synthesis.

Authors:  Masahiro Nakano; Yukihiko Sugita; Noriyuki Kodera; Sho Miyamoto; Yukiko Muramoto; Matthias Wolf; Takeshi Noda
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10.  Differential Behaviours and Preferential Bindings of Influenza Nucleoproteins on Importins-α.

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