| Literature DB >> 32141297 |
Elisabeth Rexen Ulven1,2, Tezz Quon3, Eugenia Sergeev3, Natasja Barki3, Matjaz Brvar2, Brian D Hudson3, Palash Dutta1, Anders Højgaard Hansen2, Line Ø Bielefeldt2, Andrew B Tobin3, Christine J McKenzie2, Graeme Milligan3, Trond Ulven1.
Abstract
Free fatty acid receptor 3 (FFA3, previously GPR41) is activated by short-chain fatty acids, mediates health effects of the gut microbiota, and is a therapeutic target for metabolic and inflammatory diseases. The shortage of well-characterized tool compounds has however impeded progress. Herein, we report structure-activity relationship of an allosteric modulator series and characterization of physicochemical and pharmacokinetic properties of selected compounds, including previous and new tools. Two representatives, 57 (TUG-1907) and 63 (TUG-2015), showed improved solubility and preserved potency. Of these, 57, with EC50 = 145 nM and a solubility of 33 μM, showed high clearance in vivo but is a preferred tool in vitro. In contrast, 63, with EC50 = 162 nM and a solubility of 9 μM, showed lower clearance and seems better suited for in vivo studies. Using 57, we demonstrate for the first time that FFA3 activation leads to calcium mobilization in murine dorsal root ganglia.Entities:
Year: 2020 PMID: 32141297 PMCID: PMC7307922 DOI: 10.1021/acs.jmedchem.9b02036
Source DB: PubMed Journal: J Med Chem ISSN: 0022-2623 Impact factor: 7.446
Initial SAR Investigations of 1,4,7,8-Tetrahydroquinol-5-one-3-carboxamides
Mean of ≥3 independent experiments ± standard error. Efficacy (Emax) is relative to maximal response of propionate.
cAMP assay in the presence of 1 μM propionate.
Calculated by ChemDraw Professional version 16.
Previously published.[21,22]
No response.
Scheme 1General Synthetic Route for Tetrahydroquinolone Ligands
Scaffold Exploration of Furyl and Isobutyl Analogues
Mean of ≥3 independent experiments ± standard error. Efficacy (Emax) is relative to maximal response of propionate.
cAMP assay in the presence of 1 μM propionate.
No response.
GTPγS assay.
SAR Exploration of Aliphatic and Heterocyclic Analogues
Mean of ≥3 independent experiments ± standard error. Efficacy (Emax) is relative to maximal response of propionate.
cAMP assay in the presence of 1 μM propionate.
Calculated by ChemDraw Professional version 16.
Previously published.[31]
SAR Exploration of 2,5-Dichloro Analogues
Mean of ≥3 independent experiments ± standard error. Efficacy (Emax) is relative to maximal response of propionate.
Calculated by ChemDraw Professional version 16.
Kinetic solubility at 25 °C in phosphate buffered saline pH 7.4 (PBS7.4).
No response.
Figure 1NAM 56 in the cAMP assay. (a) Concentration–response curves for propionate (C3) alone or together with 30 μM 52–56. (b) Concentration–response curves for C3 and 52–56 with 3 μM C3. (c) Concentration–response curves for C3 alone and with increasing concentrations of 56 (from 300 nM to 30 μM). Data represent the mean of three independent experiments and is normalized to forskolin.
SAR of Neutral Aliphatic R1 and Chlorinated R2
Mean of ≥3 independent experiments ± standard error. Efficacy (Emax) is relative to maximal response of propionate.
Calculated by ChemDraw Professional version 16.
No response.
Figure 2Identification of the most potent enantiomer. (a) cAMP data for (R)-1 and (S)-1, data are mean of ≥3 independent experiments ± standard error. Structure and numbering scheme of one of the two molecules (molecule A) in the asymmetric unit of (R)-1.
Figure 3Proposed allosteric binding site in a homology model of hFFA3 in complex with (R)-1. (a) Full receptor marked with the orthosteric binding site and potential allosteric binding site. (b) Overlay of 7 out of 10 docking poses. (c) Binding pocket surface. (d) Binding pose highlighting Q131.
In Vitro Stability and in Vivo Pharmacokinetic Properties of Selected Compounds in Mice
| iv dosing (5 mg/kg) | po
dosing (10 mg/kg) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| cAMP pEC50 | aq. sol. (μM) | log | MLM (%) | CLtotal (mL/min/kg) | AUCinf (ng.min/mL) | |||||||
| 6.28 | 190 | 2.05 | 52 | 62.2 | 759 | 8.45 | 89.7 | 15 | 7470 | 865 000 | 73 | |
| 6.89 | 5 | 3.19 | 1 | 22.3 | 629 | 19.6 | 60.8 | 30 | 5740 | 423 000 | 88 | |
| 5.92 | 199 | 2.64 | 23 | |||||||||
| 6.60 | 1 | 3.39 | 2 | |||||||||
| 6.72 | 1 | 2.59 | 12 | |||||||||
| 6.84 | 33 | 4.25 | 1 | 11.4 | 1150 | 70.3 | 63.5 | 30 | 561 | 33 800 | 36 | |
| 6.60 | 5 | 3.73 | 1 | |||||||||
| 6.79 | 9 | >4.3 | 41 | 37.8 | 1110 | 20.3 | 51.8 | 15 | 3800 | 325 000 | 66 | |
Most data are replicated from Tables and 3–5 (for SEM and Emax, see these tables).
Remaining after 40 min incubation with MLMs.
Figure 4Compound 57 promotes FFA3-dependent elevation of intracellular Ca2+ in cells dissociated from mouse dorsal root ganglia. The arrow indicates addition of 57 (5 μM). Results are expressed as relative fluorescence; WT (black): N = 3 (number of mice), n = 34 (number of cells) and KO (red): N = 3, n = 28.