Literature DB >> 32133996

Structural and biochemical characterization of mitochondrial citrate synthase 4 from Arabidopsis thaliana.

Kazuya Nishio1, Tsunehiro Mizushima1.   

Abstract

Citrate synthase (CS) catalyzes the conversion of oxaloacetate and acetyl coenzyme A into citrate and coenzyme A in the mitochondrial tricarboxylic acid (TCA) cycle. In plants, mitochondrial metabolism, including the TCA cycle, occurs in interaction with photosynthetic metabolism. The controlled regulation of several enzymes in the TCA cycle, such as CS, is important in plants. Here, the first crystal structure of a plant mitochondrial CS, CSY4 from Arabidopsis thaliana (AtCSY4), has been determined. Structural comparison of AtCSY4 with mitochondrial CSs revealed a high level of similarity. Inhibition analysis showed a similar manner of inhibition as in mitochondrial CSs. The effect of oxidation on one of a pair of cysteine residues in AtCSY4 was speculated upon based on the folded structure.

Entities:  

Keywords:  Arabidopsis thaliana; TCA cycle; X-ray crystallography; citrate synthase; mitochondria

Mesh:

Substances:

Year:  2020        PMID: 32133996      PMCID: PMC7057349          DOI: 10.1107/S2053230X20001521

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  28 in total

1.  Evolution of the enzymes of the citric acid cycle and the glyoxylate cycle of higher plants. A case study of endosymbiotic gene transfer.

Authors:  Claus Schnarrenberger; William Martin
Journal:  Eur J Biochem       Date:  2002-02

2.  Thioredoxin links redox to the regulation of fundamental processes of plant mitochondria.

Authors:  Yves Balmer; William H Vensel; Charlene K Tanaka; William J Hurkman; Eric Gelhaye; Nicolas Rouhier; Jean-Pierre Jacquot; Wanda Manieri; Peter Schürmann; Michel Droux; Bob B Buchanan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

3.  Inference of macromolecular assemblies from crystalline state.

Authors:  Evgeny Krissinel; Kim Henrick
Journal:  J Mol Biol       Date:  2007-05-13       Impact factor: 5.469

4.  Comparative analysis of folding and substrate binding sites between regulated hexameric type II citrate synthases and unregulated dimeric type I enzymes.

Authors:  N T Nguyen; R Maurus; D J Stokell; A Ayed; H W Duckworth; G D Brayer
Journal:  Biochemistry       Date:  2001-11-06       Impact factor: 3.162

5.  Crystallographic refinement and atomic models of two different forms of citrate synthase at 2.7 and 1.7 A resolution.

Authors:  S Remington; G Wiegand; R Huber
Journal:  J Mol Biol       Date:  1982-06-15       Impact factor: 5.469

Review 6.  Metabolic control and regulation of the tricarboxylic acid cycle in photosynthetic and heterotrophic plant tissues.

Authors:  Wagner L Araújo; Adriano Nunes-Nesi; Zoran Nikoloski; Lee J Sweetlove; Alisdair R Fernie
Journal:  Plant Cell Environ       Date:  2011-06-20       Impact factor: 7.228

7.  Redox regulation of Arabidopsis mitochondrial citrate synthase.

Authors:  Elisabeth Schmidtmann; Ann-Christine König; Anne Orwat; Dario Leister; Markus Hartl; Iris Finkemeier
Journal:  Mol Plant       Date:  2013-11-06       Impact factor: 13.164

8.  Structure of pig heart citrate synthase at 1.78 A resolution.

Authors:  Steven B Larson; John S Day; Chieugiang Nguyen; Robert Cudney; Alexander McPherson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-04-24

9.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

10.  UniProt: a worldwide hub of protein knowledge.

Authors: 
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

View more
  2 in total

1.  Repression of Mitochondrial Citrate Synthase Genes by Aluminum Stress in Roots of Secale cereale and Brachypodium distachyon.

Authors:  Diaa Abd El-Moneim; Roberto Contreras; Javier Silva-Navas; Francisco Javier Gallego; Ana M Figueiras; Cesar Benito
Journal:  Front Plant Sci       Date:  2022-04-07       Impact factor: 5.753

2.  Metabolic Profiling of Sugars and Organic Acids, and Expression Analyses of Metabolism-Associated Genes in Two Yellow-Peel Pitaya Species.

Authors:  Fangfang Xie; Canbin Chen; Jiaxuan Chen; Yuanju Yuan; Qingzhu Hua; Zhike Zhang; Jietang Zhao; Guibing Hu; Jianye Chen; Yonghua Qin
Journal:  Plants (Basel)       Date:  2022-03-04
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.